Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0179
(484 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 129 2e-30
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 129 2e-30
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 129 2e-30
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 129 2e-30
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 128 4e-30
D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain pro... 29 2.5
J03138-1|AAA28724.1| 1095|Drosophila melanogaster protein ( D.me... 29 3.3
BT003293-1|AAO25053.1| 1095|Drosophila melanogaster GH28834p pro... 29 3.3
AF181641-1|AAD55427.1| 1095|Drosophila melanogaster norpA protein. 29 3.3
AE014298-627|AAN09121.1| 1095|Drosophila melanogaster CG3620-PB,... 29 3.3
AE014298-626|AAF45942.2| 1095|Drosophila melanogaster CG3620-PA,... 29 3.3
AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,... 29 3.3
AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,... 29 3.3
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 7.7
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 7.7
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 129 bits (311), Expect = 2e-30
Identities = 64/144 (44%), Positives = 75/144 (52%)
Frame = +3
Query: 12 KNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 191
+ KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 192 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 371
+ F P +NLDKLW+LV + + K PVI++VK P +PVIV
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125
Query: 372 XXXXXXXXXXXXXXDVGGACVLSA 443
GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 129 bits (311), Expect = 2e-30
Identities = 64/144 (44%), Positives = 75/144 (52%)
Frame = +3
Query: 12 KNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 191
+ KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 192 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 371
+ F P +NLDKLW+LV + + K PVI++VK P +PVIV
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125
Query: 372 XXXXXXXXXXXXXXDVGGACVLSA 443
GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 129 bits (311), Expect = 2e-30
Identities = 64/144 (44%), Positives = 75/144 (52%)
Frame = +3
Query: 12 KNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 191
+ KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 192 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 371
+ F P +NLDKLW+LV + + K PVI++VK P +PVIV
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125
Query: 372 XXXXXXXXXXXXXXDVGGACVLSA 443
GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 129 bits (311), Expect = 2e-30
Identities = 64/144 (44%), Positives = 75/144 (52%)
Frame = +3
Query: 12 KNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 191
+ KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 192 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 371
+ F P +NLDKLW+LV + + K PVI++VK P +PVIV
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125
Query: 372 XXXXXXXXXXXXXXDVGGACVLSA 443
GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKKAGGVCLLSA 149
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 128 bits (309), Expect = 4e-30
Identities = 63/144 (43%), Positives = 75/144 (52%)
Frame = +3
Query: 12 KNKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFR 191
+ KTRKLRGHVS N GG HHHRIN DKYHPGYFGK+GMRNFH R
Sbjct: 6 RKKTRKLRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLR 65
Query: 192 KNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIV 371
+ F P +NLDKLW+LV + + K PVI++VK P +PVIV
Sbjct: 66 RQHKFRPEINLDKLWSLVGAEKFAELEKEKSTKAPVIDLVKFGYYKLLGRGHLPARPVIV 125
Query: 372 XXXXXXXXXXXXXXDVGGACVLSA 443
+ GG C+LSA
Sbjct: 126 KAKYFSKKAEDKIKEAGGVCLLSA 149
>D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain
protein protein.
Length = 761
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 296 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 397
RH C+ + +A R+TP TC S+ + +L+ S
Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743
>J03138-1|AAA28724.1| 1095|Drosophila melanogaster protein (
D.melanogaster phospholipaseC (norpA) mRNA, complete
cds. ).
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 183 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
H + N CP +NL K W RL Y GK+PV + K
Sbjct: 140 HNNRATNVCPRVNLMKHW------MRLSYCVEKSGKIPVKTLAK 177
>BT003293-1|AAO25053.1| 1095|Drosophila melanogaster GH28834p
protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 183 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
H + N CP +NL K W RL Y GK+PV + K
Sbjct: 140 HNNRATNVCPRVNLMKHW------MRLSYCVEKSGKIPVKTLAK 177
>AF181641-1|AAD55427.1| 1095|Drosophila melanogaster norpA protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 183 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
H + N CP +NL K W RL Y GK+PV + K
Sbjct: 140 HNNRATNVCPRVNLMKHW------MRLSYCVEKSGKIPVKTLAK 177
>AE014298-627|AAN09121.1| 1095|Drosophila melanogaster CG3620-PB,
isoform B protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 183 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
H + N CP +NL K W RL Y GK+PV + K
Sbjct: 140 HNNRATNVCPRVNLMKHW------MRLSYCVEKSGKIPVKTLAK 177
>AE014298-626|AAF45942.2| 1095|Drosophila melanogaster CG3620-PA,
isoform A protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3
Query: 183 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
H + N CP +NL K W RL Y GK+PV + K
Sbjct: 140 HNNRATNVCPRVNLMKHW------MRLSYCVEKSGKIPVKTLAK 177
>AE014298-625|AAX52475.1| 1095|Drosophila melanogaster CG3620-PD,
isoform D protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 168 GMRNF-HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
G+R H K N CP++ L K W RL Y GK+PV + K
Sbjct: 134 GIRKITHNVKANNICPMMCLRKHW------MRLSYCVEKSGKIPVKTLAK 177
>AE014298-624|AAX52474.1| 1095|Drosophila melanogaster CG3620-PC,
isoform C protein.
Length = 1095
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 168 GMRNF-HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVK 314
G+R H K N CP++ L K W RL Y GK+PV + K
Sbjct: 134 GIRKITHNVKANNICPMMCLRKHW------MRLSYCVEKSGKIPVKTLAK 177
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 105 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 203
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 105 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 203
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,064,622
Number of Sequences: 53049
Number of extensions: 398647
Number of successful extensions: 1561
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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