Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0177
         (773 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   2.6  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   4.5  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 467 PIVIXRHAHGDQYXAQDFVVPKPGKVELV 553
           P  + + AH  Q   Q  V P+P K+E+V
Sbjct: 290 PPQLRQQAHQQQQRQQQKVRPRPDKIEVV 318


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 62   ASLTRNYGTAKRVVAAKPVVEMDGDEMTRIMW 157
            ASL   Y   KR +AA+  ++   ++  R++W
Sbjct: 1021 ASLVDGYRYRKRYIAAQGPLQETAEDFWRMLW 1052


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,183
Number of Sequences: 2352
Number of extensions: 16118
Number of successful extensions: 59
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)