Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0177
         (773 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    27   0.26 
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   1.0  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 14/58 (24%), Positives = 27/58 (46%)
 Frame = +2

Query: 476 IXRHAHGDQYXAQDFVVPKPGKVELVYTTRDGTTEXRVLYDFKTPGVAMGMYNTDESI 649
           + +H  G +  A+   +  P  +EL +TT   +    ++   K  G+A   YN D ++
Sbjct: 180 VVQHQSGSEAEAEFVCIATPEAIELHFTTDHPSVAYLLVGSLK--GIARQFYNDDANV 235


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 569 GTTEXRVLYDFKTPGVAMGMYNTDESIRSFXH 664
           G      L  +   G+  G Y+ DE +++F H
Sbjct: 80  GVMNGSELSTYNIAGIIEGQYHDDEDLKTFFH 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,000
Number of Sequences: 438
Number of extensions: 4546
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)