Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0173
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   2.7  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   2.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   2.7  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   2.7  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   2.7  
AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase l...    22   2.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.3  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   6.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.3  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -1

Query: 213 PCEGSFRAVTSALRPFLPMGAPVSAALP 130
           P  G F ++ +++ PFL  G  V    P
Sbjct: 238 PSPGGFPSIHNSINPFLGQGFAVPGLSP 265


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 478 TPCVARHP 455
           TPC++RHP
Sbjct: 64  TPCISRHP 71


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 478 TPCVARHP 455
           TPC++RHP
Sbjct: 64  TPCISRHP 71


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 478 TPCVARHP 455
           TPC++RHP
Sbjct: 64  TPCISRHP 71


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 478 TPCVARHP 455
           TPC++RHP
Sbjct: 64  TPCISRHP 71


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 478 TPCVARHP 455
           TPC++RHP
Sbjct: 63  TPCISRHP 70


>AF260823-1|AAG02021.1|  138|Tribolium castaneum alpha-esterase like
           protein E4 protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -3

Query: 478 TPCVARHP 455
           TPC++RHP
Sbjct: 36  TPCISRHP 43


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 99  RAGKVSAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTA 215
           R  ++ AGL+S+   R   P+ +    P     N P  A
Sbjct: 233 RKSELLAGLQSSGSSRSHQPATKSKPRPAPASRNAPEPA 271


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 11/33 (33%), Positives = 11/33 (33%)
 Frame = +3

Query: 141 PRPGLPSARKAVTPMSPL*NCPRTATPPSIPST 239
           P P LP          PL   P    PP  P T
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPT 192


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 156 PSARKAVTPMSPL*NCPRTATPPSIPS-TKTVTDTS 260
           P A+++++ +S   N P    PP + S  +TV   S
Sbjct: 715 PGAKESISYLSMENNAPPPPPPPRVESFAETVRTVS 750


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,854
Number of Sequences: 336
Number of extensions: 1919
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)