Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0173
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 56 2e-08
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 56 2e-08
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 39 0.002
AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.16
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 30 0.83
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 30 0.83
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 30 1.1
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 30 1.1
Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical pr... 29 1.4
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 1.4
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 1.4
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 2.5
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 29 2.5
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 28 3.3
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 28 3.3
Z82267-2|CAB05190.1| 410|Caenorhabditis elegans Hypothetical pr... 28 4.4
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 28 4.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 27 5.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 27 5.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 5.8
Z68335-2|CAA92731.1| 390|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical ... 27 7.7
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 55.6 bits (128), Expect = 2e-08
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 107 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 280
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 215 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 273
Query: 281 APFRQEFDESNEWSGKPIPGWLYRPLCPGGVLLALHDRAPQLRVAXDRLAVTGDRGY 451
P +++ N+ S IP + YR L V ++ +DRA QL + + ++TG GY
Sbjct: 274 VPEDPAWNQ-NQSSAYVIPSFHYRELLNPTVNVSSNDRAFQLSINGN--SITGFEGY 327
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3
Query: 462 RATHGVSRGSWYW 500
RA+HGVS+G+WY+
Sbjct: 331 RASHGVSKGTWYF 343
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 55.6 bits (128), Expect = 2e-08
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +2
Query: 107 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 280
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 281 APFRQEFDESNEWSGKPIPGWLYRPLCPGGVLLALHDRAPQLRVAXDRLAVTGDRGY 451
P +++ N+ S IP + YR L V ++ +DRA QL + + ++TG GY
Sbjct: 272 VPEDPAWNQ-NQSSAYVIPSFHYRELLNPTVNVSSNDRAFQLSINGN--SITGFEGY 325
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +3
Query: 462 RATHGVSRGSWYW 500
RA+HGVS+G+WY+
Sbjct: 329 RASHGVSKGTWYF 341
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 107 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 280
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 281 AP 286
P
Sbjct: 272 VP 273
>AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical
protein F19B10.11 protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 191 ALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPI 334
A + P+ + E +++GY ++ PDP A FR E DE EW+ +P+
Sbjct: 14 ASEFPTVSWSREEEASQNGYSFMDHYPDPEATFRCE-DE--EWNPRPV 58
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 30.3 bits (65), Expect = 0.83
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 114 SAGLRSAARPRPGLP--SARKAVTPMSPL*NCPRTATPPSIPSTKT 245
SA AAR RP +P SA +A+T +P T T + P+T+T
Sbjct: 303 SASTTGAARTRPAVPAVSAPRALTSRAPAGPARPTTTRSATPATRT 348
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 30.3 bits (65), Expect = 0.83
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 114 SAGLRSAARPRPGLP--SARKAVTPMSPL*NCPRTATPPSIPSTKT 245
SA AAR RP +P SA +A+T +P T T + P+T+T
Sbjct: 325 SASTTGAARTRPAIPAVSAPRALTSRAPTGPACPTTTRSAAPATRT 370
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +2
Query: 92 NVKGRQGKRRPAVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYI-LAE 268
N G + + RP+ A G G++ N+D+ L+ H +P N + Y I L++
Sbjct: 8 NGNGGERQMRPSPSEAVIFGINNGQQAINSDIARLQSLVHHSRDYYPSNIEHYPPIPLSQ 67
Query: 269 P----DPHAPFRQEFDESNEWS-GKPIPGWLYRPLCPGGVLLALHD 391
P +P P D + P P + +P+ P + + HD
Sbjct: 68 PCHFFNPPPPSLMSLDLHQQMMLPPPPPAPIIQPISPTPLPASFHD 113
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +2
Query: 92 NVKGRQGKRRPAVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYI-LAE 268
N G + + RP+ A G G++ N+D+ L+ H +P N + Y I L++
Sbjct: 91 NGNGGERQMRPSPSEAVIFGINNGQQAINSDIARLQSLVHHSRDYYPSNIEHYPPIPLSQ 150
Query: 269 P----DPHAPFRQEFDESNEWS-GKPIPGWLYRPLCPGGVLLALHD 391
P +P P D + P P + +P+ P + + HD
Sbjct: 151 PCHFFNPPPPSLMSLDLHQQMMLPPPPPAPIIQPISPTPLPASFHD 196
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 253 SVTVFVEGMLGGVAVRGQFQSGDIGVTAFLADGSPGLGRAADRRPA--LTLPALHVA 89
S VF+ G + V G F S D V ++L DGS AD PA +P L VA
Sbjct: 923 SNVVFINGNIDPYHVLGLFNSPDSSVVSYLIDGS---SHCADMFPARDSDVPGLKVA 976
>Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical
protein F13E9.9 protein.
Length = 326
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +2
Query: 125 AVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFD 304
++ A++ P GKK +N D+T P E+ + R+ E H Q+F
Sbjct: 222 SIPGKAKSILPGGKK-KNGDITLNDYTQDSSPQENHLHVHRDRHYHDERHAHQDDSQQFS 280
Query: 305 ESNEWSG 325
N+W G
Sbjct: 281 VYNDWDG 287
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 104 RQGKRRPAVGSAAETGAPIGKKGR 175
++G+ RPA +A+ G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 89 GNVKGRQGKRRPAVGSAAETGAPIGKKGR 175
G+ ++G+ RP +A+ G+P+ KKGR
Sbjct: 115 GSSPVKKGRGRPIKNPSADAGSPLVKKGR 143
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 104 RQGKRRPAVGSAAETGAPIGKKGR 175
++G+ RPA +A+ G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 89 GNVKGRQGKRRPAVGSAAETGAPIGKKGR 175
G+ ++G+ RP +A+ G+P+ KKGR
Sbjct: 115 GSSPVKKGRGRPIKNPSADAGSPLVKKGR 143
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 266 EPDPHAPFRQEFDESNEWSGKPIPGWLYR 352
E D AP+ + + W GKPIP WLY+
Sbjct: 370 EIDESAPYNPK-NLPLGWDGKPIPYWLYK 397
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 195 RAVTSALRPFLPMGAPVSAALPT---AGLRLPCLPFTLPASGTAIISSR 58
R+ T+ F P G PV+ A PT G+ + P LP S A+ S+R
Sbjct: 298 RSSTTTPHRFNPYGKPVAPAPPTMQQMGMNMAMNPLVLPFSLQAMYSNR 346
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 143 RPRCRPQACAYLACPSRCR 87
RP+ + C L CPSRCR
Sbjct: 220 RPKVEARPCPMLICPSRCR 238
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -1
Query: 195 RAVTSALRPFLPMGAPVSAALPT---AGLRLPCLPFTLPASGTAIISSR 58
R+ T+ F P G PV+ A PT G+ + P LP S A+ S+R
Sbjct: 298 RSSTTTPHRFNPYGKPVAPAPPTMQQMGMNMAMNPLVLPFSLQAMYSNR 346
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +1
Query: 178 RRCHRSETALARLPH-RASLQQRRLQIHLGGTRPAR-----ALQTGVRREQ 312
RR R+ + R P RAS +QR L+ H G +P + A+ G+RR Q
Sbjct: 11 RRSTRNAVSRMRKPKPRASAKQRSLERHFGSRQPTKNKFLNAIYWGIRRCQ 61
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -1
Query: 219 G*PCEGSFRAVTSALRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTA 73
G P G + A P +PM P+S+ALP +P T+ SG A
Sbjct: 728 GTPSLGRELSTPLATTPLIPMNFPLSSALPVIS-AIPSNASTMDLSGAA 775
>Z82267-2|CAB05190.1| 410|Caenorhabditis elegans Hypothetical
protein F38C2.4 protein.
Length = 410
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +2
Query: 173 RNADVTALKLPSHGYPTEHP-----FNKDGYRYILAEPDPHAPFRQEFDESNEW 319
R+ V + + HG+PT H +K G+R EP+P F E+ NE+
Sbjct: 340 RDFYVCQILIEIHGFPTIHLALLKIMSKYGFRIFNVEPNPQCYFCCEYSLINEF 393
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 207 EGSFRAVTSALRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTAIISSRCSN 49
+ R +A PF P PV + LP AG +P T ++G SR S+
Sbjct: 395 QAPLRLGPNATNPFRPAPLPVPSQLPIAG--IPWAELTTSSAGAGSARSRGSD 445
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 114 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIP 233
S GL A P P S + + P PL P TP + P
Sbjct: 566 SHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRP 605
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 114 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIP 233
S GL A P P S + + P PL P TP + P
Sbjct: 392 SHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRP 431
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +3
Query: 129 SAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTD 254
S A+P P +P+ +P P + P PPS S + +
Sbjct: 575 SPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPNAIPE 616
>Z68335-2|CAA92731.1| 390|Caenorhabditis elegans Hypothetical
protein C29F4.3 protein.
Length = 390
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -1
Query: 168 FLPMGAPVSAALPTAGLRLPCLPFTLPASGTAIISSRCSNFQRIINIKKXLVSR 7
++P V + + L L F + + ++I +RCSN+ RII +++ + +
Sbjct: 261 WIPYHFLVQSLVQLNALLLSVTVFLVLPTYRSVIFNRCSNYNRIIKVEEFKIEK 314
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 27.1 bits (57), Expect = 7.7
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Frame = -1
Query: 366 PGHSGRYSQPGIGLPL-HSLLSSNSCLKGACGSGSAKMYL*PSLLKGCSVG*PCEGSFRA 190
PG +G+ QPG+ P H C +GA G A P G + G P G +
Sbjct: 109 PGPAGKPGQPGVAGPAHHQQQECIKCPQGAPGPAGAPGNPGPQGPNG-NPGAPAHGGGQG 167
Query: 189 VTSALRPFLPMGAPVSAALP 130
P G+P A P
Sbjct: 168 PPGPPGPAGDAGSPGQAGAP 187
>AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical
protein F42G8.5 protein.
Length = 304
Score = 27.1 bits (57), Expect = 7.7
Identities = 21/78 (26%), Positives = 30/78 (38%)
Frame = +2
Query: 167 KGRNADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPIPGWL 346
K N + +H P F KD Y+ + P P P + + L
Sbjct: 145 KKHNDPARLTTITTHYVPLPPIFEKDPYQPL---PPPAYPVLENRHAMSNVVKPHDEKKL 201
Query: 347 YRPLCPGGVLLALHDRAP 400
Y P+ PG L+LH R+P
Sbjct: 202 YPPVIPGCSTLSLHRRSP 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,127,845
Number of Sequences: 27780
Number of extensions: 186370
Number of successful extensions: 692
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -