Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0170
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   6.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.5  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 522 NEYHHRSDAADSTXHCQPYPASNQTGQGN 608
           NE  H  D  ++   CQ +P  N    GN
Sbjct: 135 NERTHSCDWPENVDGCQKHPLCNDDPNGN 163


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 253 FFETSTQRPLVKNYKSAAKIRAKER 327
           F++  T   L+KN +S AKI+  +R
Sbjct: 88  FYKRRTWTRLLKNLESCAKIKKTKR 112


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 173  ILTGAGVWYWDYLCYHHFITVRAEVKF 93
            I+  A V+Y  ++CY     VRA++ F
Sbjct: 1003 IICAADVFYICHVCYATIQEVRAKIYF 1029


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 173 ILTGAGVWYWDYLCYHHFITVRAEVKF 93
           I+  A V+Y  ++CY     VRA++ F
Sbjct: 284 IICAADVFYICHVCYATIQEVRAKIYF 310


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 631 PQILXRSFSEDTLDEPFDIRVE 696
           PQIL   F ED+++E   + V+
Sbjct: 603 PQILPFDFGEDSINEGDGVSVQ 624


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 5/21 (23%), Positives = 11/21 (52%)
 Frame = -2

Query: 179 FCILTGAGVWYWDYLCYHHFI 117
           +C+   +  ++W Y  Y  +I
Sbjct: 115 YCLFVASNCFFWSYQSYMSYI 135


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 5/21 (23%), Positives = 11/21 (52%)
 Frame = -2

Query: 179 FCILTGAGVWYWDYLCYHHFI 117
           +C+   +  ++W Y  Y  +I
Sbjct: 115 YCLFVASNCFFWSYQSYMSYI 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,008
Number of Sequences: 336
Number of extensions: 3553
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)