Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0168
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   4.2  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   7.3  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   9.6  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   9.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 227 PVSALVPLSGHKDLSVSNVCSPLDTSRFSVVPPDAYRG 114
           P  A  PL   K L+V    S    SRF  + PD++ G
Sbjct: 108 PEGAFQPLLELKKLTVQTFNSVWGASRFLELAPDSFLG 145


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 112 NPRYASGGTTLKRLVSRGEQTFETDKSL 195
           NP        L  L+S+GE++F T +SL
Sbjct: 78  NPSNEVVAVALGALLSKGEESFPTARSL 105


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 82  KAILSLAPAV--NPRYASGGTTLKRLVSRGEQT 174
           K +LSL   V  +    SGG +L+ L+ RG++T
Sbjct: 716 KPLLSLEDLVRFSTLEGSGGDSLRTLLQRGQET 748


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -2

Query: 483  IFFEARISSAKSCHG-----TSDGVKTFLPGMSLAV*NPTTXWSFNASDSSKLSISPRHT 319
            I   +++ + K+ HG     T  G+KT    +   V  PTT  S  +  + + +I  + +
Sbjct: 1241 IILPSQLLNIKTLHGLKVIPTPAGLKTTGAAVYARVIAPTTITSSQSPGNQQQTIQTQPS 1300

Query: 318  SDNTKAT 298
             +NT +T
Sbjct: 1301 RNNTYST 1307


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 693 HVIKGXFSMPSXYHYTMGN 749
           +++   +S P  +H+TMG+
Sbjct: 403 NLLNNVYSTPGPHHHTMGH 421


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 415 ERLHTVRRAVARLCRRDPGFEE 480
           E L    RAV  +CR D G +E
Sbjct: 20  EELQIGLRAVIPVCRIDSGIDE 41


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 186 ICFERLLSPRYE 151
           ICF +LLS  YE
Sbjct: 136 ICFSKLLSDMYE 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,231
Number of Sequences: 438
Number of extensions: 4272
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)