Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0166
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    31   0.014
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   3.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   6.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   8.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   8.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.3  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 0.014
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -3

Query: 170 SLSLCARGPGPSPSCTGRS*TPPISXGPVAERN-TVQLLCSCPPCSHDE 27
           S  L A G  PSP+  G    PP    P ++R  T +  C CP C   E
Sbjct: 253 SFGLHATGSAPSPTA-GAGGLPPQVPSPRSQRRYTGRATCDCPNCQEAE 300



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = -1

Query: 475 TMSFTTAAAFLTVLIQKFVNNXGPFEHRSLIVDLVIDQSTFHVGSIWHWPEAQTW 311
           T S+ +   F     Q   +N     H++ ++  V   +T H+GS++     ++W
Sbjct: 111 TASYGSDLYFPGATSQPPTDNSHVHHHQTSLLGKVEGAATHHLGSVYSRHPYESW 165


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 338 DTANVESTLIYYKVNDKGSVLKWAXVIDEF 427
           D+ +VE  + Y +  + G V  WA  +D+F
Sbjct: 491 DSESVEKKVNYVQEMNLGGVFIWATDLDDF 520



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/31 (22%), Positives = 14/31 (45%)
 Frame = +2

Query: 14   DRSPAHRVNMADKNKVAEQYYAPPPDLXKWE 106
            ++ P H+ + +   K  +  Y PP     W+
Sbjct: 1154 EKKPGHKPSTSSWQKPTKPSYRPPSTTNHWQ 1184


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 509 RCWESMVRGFRHHELHHCRCLSYGID 432
           RCWE  + G  + + ++  CL  G D
Sbjct: 533 RCWEVFMDGICNEDCNNPECLFDGRD 558


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 481 FGTMSFTTAAAFLTVLIQKFVN 416
           +GT +++    F+TV++  F+N
Sbjct: 170 YGTKTYSLFIVFMTVILPYFIN 191


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 481 FGTMSFTTAAAFLTVLIQKFVN 416
           +GT +++    F+TV++  F+N
Sbjct: 170 YGTKTYSLFIVFMTVILPYFIN 191


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +2

Query: 2   QSISDRSPAHRVNMADKNKVAEQYYAPPPDLXKW 103
           +S S   P H  N  D  + A  Y AP P    W
Sbjct: 274 KSASLSPPPHVYNPPDHIQQATPYSAPGPTYSTW 307


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 476 AENRVPCSPSSGPLGEKQVCDVPVDDFNPCTPANQY 583
           A N+   + + G LG   + D+ +DDF      N+Y
Sbjct: 387 AGNKASYARAKG-LGGIAIVDITLDDFRGLCTGNKY 421


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 644 PQPYNNTEDLP 676
           PQPY N +D P
Sbjct: 18  PQPYMNAQDAP 28


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 226 EEAHQNRVEDKVK*QDLC 173
           EE  + R EDK K + LC
Sbjct: 544 EEEKKKREEDKAKFEGLC 561


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 366 SITRSTIRDLCSNGPXLLTNF*INTV 443
           S+     R +C NGP  + N   NT+
Sbjct: 358 SLDTDDFRGICGNGPYPILNAIKNTL 383


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 366 SITRSTIRDLCSNGPXLLTNF*INTV 443
           S+     R +C NGP  + N   NT+
Sbjct: 358 SLDTDDFRGICGNGPYPILNAIKNTL 383


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/51 (21%), Positives = 21/51 (41%)
 Frame = +2

Query: 275 KWQLDSSIIGSNPGLGFRPMPDTANVESTLIYYKVNDKGSVLKWAXVIDEF 427
           KW     +  +  G  +    D  +V+  + + K    G  + WA  +D+F
Sbjct: 326 KWDEHGKVPYAYKGNQWVGYEDPESVQIKMDWIKSKGYGGAMTWAIDMDDF 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,032
Number of Sequences: 336
Number of extensions: 4036
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)