Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0162
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 254 5e-68
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 254 5e-68
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 213 2e-55
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 8e-39
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 131 5e-31
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 4e-18
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 61 1e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 7e-05
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 39 0.003
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 39 0.005
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.024
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 34 0.13
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 34 0.13
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.22
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.52
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.6
SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 30 2.1
SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026) 29 3.6
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 3.6
SB_36477| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 349 FAGKQL 354
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 425 FAGKQL 430
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 501 FAGKQL 506
Score = 157 bits (381), Expect = 8e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGM 77
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 355 EDGRTLSDYNIQKESTLHLVLRLRGGM 381
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 431 EDGRTLSDYNIQKESTLHLVLRLRGGM 457
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTLSDYNIQKESTLHLVLRLR G
Sbjct: 507 EDGRTLSDYNIQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 254 bits (622), Expect = 5e-68
Identities = 125/126 (99%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 349 FAGKQL 354
Score = 157 bits (381), Expect = 8e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGM 77
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLSDYNIQKESTLHLVLRLRGGM 153
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLSDYNIQKESTLHLVLRLRGGM 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLSDYNIQKESTLHLVLRLRGGM 305
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTLSDYNIQKESTLHLVLRLR G
Sbjct: 355 EDGRTLSDYNIQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 213 bits (519), Expect = 2e-55
Identities = 106/126 (84%), Positives = 115/126 (91%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL+
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119
Query: 531 FAGKQL 548
+ ++L
Sbjct: 120 YEEEEL 125
Score = 81.8 bits (193), Expect = 5e-16
Identities = 41/71 (57%), Positives = 54/71 (76%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQI VK KT TL+VE SDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 351 IQKESTLHLVL 383
I++ S LHL L
Sbjct: 136 IKQGSILHLFL 146
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGGM 77
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 553 DGRTLSDYNIQKESTLHLVL 612
D R+L+DYNI++ S LHL L
Sbjct: 127 DNRSLADYNIKQGSILHLFL 146
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 157 bits (381), Expect = 8e-39
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 101 bits (241), Expect = 7e-22
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 50
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTLSDYNIQKESTLHLVLRLR G
Sbjct: 51 EDGRTLSDYNIQKESTLHLVLRLRGG 76
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 131 bits (317), Expect = 5e-31
Identities = 63/63 (100%), Positives = 63/63 (100%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 351 IQK 359
IQK
Sbjct: 139 IQK 141
Score = 101 bits (242), Expect = 6e-22
Identities = 50/54 (92%), Positives = 50/54 (92%)
Frame = +3
Query: 387 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 128
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 550 EDGRTLSDYNIQK 588
EDGRTLSDYNIQK
Sbjct: 129 EDGRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 4e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3
Query: 276 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 401
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 54.8 bits (126), Expect = 6e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTLSDYNIQKESTLHLVLRLR G+
Sbjct: 17 EDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 35.1 bits (77), Expect = 0.056
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 504 IPPDQQRLIFAGKQL 548
IPPDQQRLIFAGKQL
Sbjct: 2 IPPDQQRLIFAGKQL 16
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +3
Query: 177 IFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 353
I V TLTG+ I + + P TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 354 QKESTLHLVLRLRGG 398
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 405 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVL 121
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 341
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 342 DYNIQKES 365
+YNI ++S
Sbjct: 127 EYNIDEKS 134
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 354 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 527
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 528 IFAGKQLGRRTHLVRLQYSKGIYTPFSVTSTXRNV 632
I K L++ + + +T + + RNV
Sbjct: 79 IIGKKMAKPNESLLQCKVRETGFTAYLYLLSGRNV 113
Score = 36.3 bits (80), Expect = 0.024
Identities = 28/99 (28%), Positives = 48/99 (48%)
Frame = +3
Query: 195 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 374
+G L++ + TIE ++ ++ DK G PP QR I G+ ++ N ES L
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWII-------GKKMAKPN---ESLLQ 93
Query: 375 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQ 491
+R G ++ L+G+ + L E +T++ K K Q
Sbjct: 94 CKVR-ETGFTAYLYLLSGRNVELTREDVETLKLQKQKTQ 131
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 174 QIFVKTLTGKTITLEVEPSDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 351 IQK 359
+++
Sbjct: 67 LKQ 69
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +3
Query: 402 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLGRRTHLVRLQ 578
Q+F T TL +D + +K++I+ K GIP D QRL F K+L L ++
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 579 YSKGIYTPFSVTSTXRNV 632
+G + S ++
Sbjct: 67 LKQGCIVRIKMDSNYESL 84
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 347
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 348 NIQKESTLHLVLR 386
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
M++ V G TL+V +EN +A ++ + G+P + L G QL
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQL 50
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 272
M ++++TLTG L V P +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.097
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.024
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQ+ VKTL +T T V +EGIP ++QRLIF GK L
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVL 36
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 213 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV-LRL 389
LE+ T+ N+K ++ G+P + Q + D L D+ K++ H L+L
Sbjct: 19 LEIASDKTVYNLKLICEEHFGVPVELQAIYLVDN---DDVELQDWACLKDAATHTFKLQL 75
Query: 390 RGGMQIFVKTLTGKTIT-LEVEASDTIENVKAKIQDKEGIPPDQQRL 527
F L I LE+ + T+ N+K ++ G+P + Q +
Sbjct: 76 MESAAKFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAI 122
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 180 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 359
FV G+ ITL P + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 360 ESTLHLVLR 386
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3
Query: 273 GIPPDQQRLIFAGKQLEDGRTLSDYN 350
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 32.7 bits (71), Expect = 0.30
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +3
Query: 234 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 410
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L G F
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIR--LETWNGWADF 143
Query: 411 VKTLT-GK-TITLEVEASDTIENVKAKIQDK 497
+K T G+ T TL+ S + + + AK Q +
Sbjct: 144 LKAATKGQLTPTLKHMLSISEDPLVAKYQQR 174
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +3
Query: 177 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 356
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 357 KEST 368
+++T
Sbjct: 245 QKAT 248
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = +2
Query: 272 RNSS*STASHLCWQAAGRRTHVVRLQHSKRIHTASCTASSWRHADLRENSDRKDHHFGSR 451
R SS +T SH + R+ R ++ R HT + ++ RH N+ R+ S
Sbjct: 711 RRSSNTTRSHTRRSSNTTRSLTRRSSNTTRSHTRRSSNTTRRHTRRSSNTTRRHTRRSSN 770
Query: 452 SFGHN*EREGEDPR-QRRNSS*STASHLCRQA 544
+ + R R R SS +T SH R +
Sbjct: 771 TTRSHTRRSSNTTRGHTRRSSNTTRSHTRRSS 802
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 287 STASHLCWQAAGRRTHVVRLQHSKRIHTASCTASSWRHADLRENSDRKDHHFGSRSFGHN 466
+T SH + RTH R ++ R HT + ++ HA N+ R S + +
Sbjct: 1053 TTRSHTRRSSNTTRTHTRRSSNTTRGHTRRSSNTTRSHARRSSNTTRSHTRRSSNTTRSH 1112
Query: 467 *EREGEDPRQR-RNSS*STASHLCRQ 541
R R R SS +T H RQ
Sbjct: 1113 TGRSSNTTRSHTRRSSNTTRGHTRRQ 1138
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
Frame = +2
Query: 272 RNSS*STASHLCWQAAGRRTHVVRLQHSKRIHTASCTASSWRHADLRENSDRKDHHFGSR 451
R SS +T H + R+H R ++ R HT + ++ H N+ R S
Sbjct: 1070 RRSSNTTRGHTRRSSNTTRSHARRSSNTTRSHTRRSSNTTRSHTGRSSNTTRSHTRRSSN 1129
Query: 452 SF-GHN*EREGEDPRQRRNSS*STASHLCR 538
+ GH + + R SS +T H R
Sbjct: 1130 TTRGHTRRQVTQLASHTRRSSNTTRRHTRR 1159
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 360 ESTLHLVLRLRGGM 401
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 360 ESTLHLVLRLRGGM 401
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_1963| Best HMM Match : rve (HMM E-Value=0.022)
Length = 931
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 183 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 353
+ +L G I P +++A IP DQ L F + LEDGR Y +
Sbjct: 533 LNSLVGVLIRFREHPVAIAADIEAMFMQCRVIPTDQPSLRFLWRDLEDGRRPDVYQM 589
>SB_31564| Best HMM Match : ubiquitin (HMM E-Value=0.0026)
Length = 309
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 183 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR---TLSDYNI 353
V + G+T + P +I +K KI + +QRL++ +L++ + LS++ +
Sbjct: 60 VAMMGGETTVIPYNPVMSIAELKLKISQNIRVDRLKQRLMYNDTELKENKGSGKLSEFGV 119
Query: 354 QKESTLHLVLRL 389
+T+ L++ L
Sbjct: 120 PPYATISLIVVL 131
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +3
Query: 183 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 356
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 357 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 503
+E L+ ++ G + L + L E S +++ ++DK G
Sbjct: 565 RELELYRQIKDENGTVSRIVNLEKQVNDLSGENS-SLKTTMGDVKDKVG 612
>SB_36477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 374 SCTASSWRHADLRENSDRKDHHFGSRSFGHN*EREGEDPRQRRNSS*STASHLCRQAAGK 553
S TAS + ++ R++S R+DH S+ + N + +PR S ST S +G+
Sbjct: 6 STTASYKQGSNKRKDSSRRDHSHTSK-YSSNSYEDVSEPRWTGKLSQSTPSSSASSLSGR 64
Query: 554 TDAPCQTTI 580
P + I
Sbjct: 65 NWPPSKIDI 73
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 426 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAG 539
G T E+E A +++E + I GIP D+Q L+ G
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICG 48
>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3307
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = -2
Query: 390 EDAVQDAVWILFECCSLTT--CVRLPAACQQR*DAVDQEEFLLCLGSSPS 247
E AV+D W++ + C L T L C++ +F L L S PS
Sbjct: 2493 EKAVKDGTWVVLQNCHLATSWMPTLEKLCEELNPDTTHPDFRLWLTSYPS 2542
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,790,582
Number of Sequences: 59808
Number of extensions: 436520
Number of successful extensions: 1276
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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