Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0162
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 248 3e-66
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 248 3e-66
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 248 3e-66
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 248 3e-66
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 248 3e-66
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 248 3e-66
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 248 3e-66
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 248 3e-66
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 248 3e-66
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 248 3e-66
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 248 3e-66
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 248 3e-66
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 248 3e-66
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 242 2e-64
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 238 3e-63
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 217 4e-57
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 217 8e-57
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 217 8e-57
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 153 1e-37
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 152 2e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 152 2e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 151 3e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 151 3e-37
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 117 9e-27
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 108 3e-24
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 5e-20
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 81 7e-16
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 81 7e-16
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 69 4e-12
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 67 9e-12
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 1e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 63 2e-10
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 2e-08
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 56 3e-08
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 9e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 9e-07
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 1e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 1e-06
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 1e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 1e-06
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 50 2e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 3e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 49 3e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 49 3e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 49 3e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 49 3e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 49 3e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 49 3e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 47 1e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 45 6e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 7e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 7e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 3e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 4e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 38 0.005
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.011
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.011
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 36 0.020
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 35 0.045
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 34 0.079
At1g11970.1 68414.m01383 hypothetical protein 34 0.079
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.18
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.24
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 31 0.56
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.98
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.3
At1g20930.1 68414.m02621 cell division control protein, putative... 29 2.3
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 29 2.3
At4g13030.2 68417.m02034 expressed protein 29 3.9
At4g13030.1 68417.m02033 expressed protein 29 3.9
At1g47680.1 68414.m05297 hypothetical protein 29 3.9
At2g15680.1 68415.m01795 calmodulin-related protein, putative si... 28 5.2
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 28 6.9
At4g12810.1 68417.m02009 F-box family protein similar to F-box p... 28 6.9
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 27 9.1
At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) / polyc... 27 9.1
At1g56600.1 68414.m06509 galactinol synthase, putative similar t... 27 9.1
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 349 FAGKQL 354
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 355 EDGRTLADYNIQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 215 bits (524), Expect = 3e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 250 RRRSKTKKEFLLINSVSSLLASSWKTDARCQTTTFKKNPHCILYCVFVEACRS 408
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 349 FAGKQL 354
Score = 215 bits (524), Expect = 3e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 355 EDGRTLADYNIQKESTLHLVLRLRGGM 381
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 250 RRRSKTKKEFLLINSVSSLLASSWKTDARCQTTTFKKNPHCILYCVFVEACRS 408
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 215 bits (524), Expect = 3e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 250 RRRSKTKKEFLLINSVSSLLASSWKTDARCQTTTFKKNPHCILYCVFVEACRS 408
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 349 FAGKQL 354
Score = 215 bits (524), Expect = 3e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 355 EDGRTLADYNIQKESTLHLVLRLRGGM 381
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 250 RRRSKTKKEFLLINSVSSLLASSWKTDARCQTTTFKKNPHCILYCVFVEACRS 408
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 215 bits (524), Expect = 3e-56
Identities = 105/110 (95%), Positives = 109/110 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGGM 305
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 250 RRRSKTKKEFLLINSVSSLLASSWKTDARCQTTTFKKNPHCILYCVFVEACRS 408
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 197 FAGKQL 202
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 273 FAGKQL 278
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGGM 229
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 279 EDGRTLADYNIQKESTLHLVLRLRGG 304
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 248 bits (607), Expect = 3e-66
Identities = 121/126 (96%), Positives = 125/126 (99%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 242 bits (592), Expect = 2e-64
Identities = 119/126 (94%), Positives = 123/126 (97%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+S TI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 212 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLI 271
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 272 FAGKQL 277
Score = 237 bits (581), Expect = 4e-63
Identities = 119/126 (94%), Positives = 123/126 (97%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLI
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLI 195
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 196 FAGKQL 201
Score = 101 bits (241), Expect = 6e-22
Identities = 49/53 (92%), Positives = 50/53 (94%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 329
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGM 77
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 202 EDGRTLADYNIQKESTLHLVLRLRGGM 228
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+D NIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLAD-NIQKESTLHLVLRLRGGM 152
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 242 bits (592), Expect = 2e-64
Identities = 118/125 (94%), Positives = 123/125 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLI 196
Query: 531 FAGKQ 545
FAGKQ
Sbjct: 197 FAGKQ 201
Score = 229 bits (561), Expect = 1e-60
Identities = 110/126 (87%), Positives = 120/126 (95%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
+Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLI
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 121 FAGKQL 126
Score = 145 bits (352), Expect = 2e-35
Identities = 71/76 (93%), Positives = 73/76 (96%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 127 EDGRTLADYNIQKESTLHLVLRLRGGM 153
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 203 EDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYN+Q++STLHL+LR R GM
Sbjct: 51 EDGRTLADYNVQEDSTLHLLLRFRGGM 77
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 238 bits (582), Expect = 3e-63
Identities = 115/126 (91%), Positives = 122/126 (96%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLI
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLI 198
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 199 FAGKQL 204
Score = 226 bits (553), Expect = 1e-59
Identities = 112/126 (88%), Positives = 118/126 (93%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRL GGMQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLI
Sbjct: 215 IQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLI 274
Query: 531 FAGKQL 548
FAG+QL
Sbjct: 275 FAGEQL 280
Score = 215 bits (524), Expect = 3e-56
Identities = 105/126 (83%), Positives = 115/126 (91%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQK+S LHL LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLI
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLI 122
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 123 FAGKQL 128
Score = 134 bits (324), Expect = 5e-32
Identities = 68/77 (88%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDY 347
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I PDQQRLIFAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 348 NIQKESTLHLVLRLRGG 398
NIQKESTLHLVLRLRGG
Sbjct: 291 NIQKESTLHLVLRLRGG 307
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
+DGRTL+DYNIQKESTLHLVLRLR GM
Sbjct: 129 DDGRTLADYNIQKESTLHLVLRLRGGM 155
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRL GM
Sbjct: 205 EDGRTLADYNIQKESTLHLVLRLCGGM 231
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
+DGRTL+DY+IQK+S LHL LRLR GM
Sbjct: 53 DDGRTLADYSIQKDSILHLALRLRGGM 79
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/27 (85%), Positives = 24/27 (88%), Gaps = 1/27 (3%)
Frame = +1
Query: 550 EDGR-TLSDYNIQKESTLHLVLRLRXG 627
EDG TL+DYNIQKESTLHLVLRLR G
Sbjct: 281 EDGYYTLADYNIQKESTLHLVLRLRGG 307
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 217 bits (531), Expect = 4e-57
Identities = 108/126 (85%), Positives = 118/126 (93%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLI
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLI 122
Query: 531 FAGKQL 548
FAGKQL
Sbjct: 123 FAGKQL 128
Score = 207 bits (506), Expect = 5e-54
Identities = 105/131 (80%), Positives = 117/131 (89%), Gaps = 5/131 (3%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGK-----TITLEVEASDTIENVKAKIQDKEGIPPD 515
IQKESTLHLVLRL GGMQIFV T +GK T+TL+VE+SDTIENVKAKIQD+EG+ PD
Sbjct: 139 IQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPD 198
Query: 516 QQRLIFAGKQL 548
QRLIF G++L
Sbjct: 199 HQRLIFHGEEL 209
Score = 174 bits (424), Expect = 4e-44
Identities = 101/172 (58%), Positives = 117/172 (68%), Gaps = 8/172 (4%)
Frame = +3
Query: 75 KLIIFARSNSVLCS*LFDIQLTKRNYCIF*IIMQIFVKTLTGKTITLEVEPSDTIENVKA 254
+LI + C+ L D + K + + MQIFVK GK ITLEV SDTI++VKA
Sbjct: 362 RLIFLGKELKDGCT-LADYSIQKESTLHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKA 420
Query: 255 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL---- 422
KIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT
Sbjct: 421 KIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSG 480
Query: 423 ---TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-GRRTHL 566
T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L G RT L
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLL 532
Score = 172 bits (419), Expect = 2e-43
Identities = 93/133 (69%), Positives = 101/133 (75%), Gaps = 7/133 (5%)
Frame = +3
Query: 171 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 329
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 330 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 509
RTL DYNIQK ST+H + RGGMQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIK 588
Query: 510 PDQQRLIFAGKQL 548
PDQQ LIF G+QL
Sbjct: 589 PDQQMLIFFGQQL 601
Score = 169 bits (410), Expect = 2e-42
Identities = 92/128 (71%), Positives = 101/128 (78%), Gaps = 2/128 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSD 344
MQIFVKTLT K I LEVE DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 345 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 524
Y+IQKESTLHLVL GMQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ
Sbjct: 379 YSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQI 434
Query: 525 LIFAGKQL 548
L+F G QL
Sbjct: 435 LLFRGGQL 442
Score = 167 bits (405), Expect = 8e-42
Identities = 92/133 (69%), Positives = 101/133 (75%), Gaps = 7/133 (5%)
Frame = +3
Query: 171 MQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 335
M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP D RLIFAGK LE GRT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 336 LSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI--P 509
L+ YNIQK STL+LV R R GMQIFVKTLT K I LEVE+ DTIENVKA +QDKEGI
Sbjct: 298 LAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQ 357
Query: 510 PDQQRLIFAGKQL 548
P+ QRLIF GK+L
Sbjct: 358 PNLQRLIFLGKEL 370
Score = 164 bits (398), Expect = 6e-41
Identities = 96/153 (62%), Positives = 109/153 (71%), Gaps = 13/153 (8%)
Frame = +3
Query: 171 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 329
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 330 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVEASDTIENVKAKIQD 494
RTL+DY I+ STL L LRLRG M IFVK L TG+ LEVE+SDTI+NVKAK+QD
Sbjct: 215 RTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQD 274
Query: 495 KEGIPPDQQRLIFAGKQL-GRRTHLVRLQYSKG 590
KE IP D RLIFAGK L G RT L KG
Sbjct: 275 KERIPMDLHRLIFAGKPLEGGRT-LAHYNIQKG 306
Score = 116 bits (278), Expect = 2e-26
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI PDQQ LIF G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 351 IQKESTLHLVLRLR 392
I K+STL+LVLRLR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 54.0 bits (124), Expect = 9e-08
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM*FHIQS 648
EDG TL+DYNIQKESTLHLVLRLR GM +Q+
Sbjct: 53 EDGLTLADYNIQKESTLHLVLRLRGGMQIFVQT 85
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRL GM
Sbjct: 129 EDGRTLADYNIQKESTLHLVLRLCGGM 155
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
+DGRTL DYNI+ ESTLHL +R GM
Sbjct: 443 QDGRTLGDYNIRNESTLHLFFHIRHGM 469
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
E GRTL+ YNIQK STL+LV R R GM
Sbjct: 293 EGGRTLAHYNIQKGSTLYLVTRFRCGM 319
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLR 621
EDG TL DY+I K+STL+LVLRLR
Sbjct: 602 EDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLR 621
+DG TL+DY+IQKESTLHLVL ++
Sbjct: 371 KDGCTLADYSIQKESTLHLVLGMQ 394
Score = 35.9 bits (79), Expect = 0.026
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
ED RTL+DY I+ STL L LRLR M
Sbjct: 212 EDNRTLADYGIRNRSTLCLALRLRGDM 238
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 559 RTLSDYNIQKESTLHLVLRLRXGM*FHIQS 648
RTL DYNIQK ST+H + R GM I++
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGGMQIFIKT 558
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 217 bits (529), Expect = 8e-57
Identities = 103/126 (81%), Positives = 116/126 (92%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 531 FAGKQL 548
+AGKQL
Sbjct: 121 YAGKQL 126
Score = 102 bits (244), Expect = 3e-22
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = +3
Query: 177 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 356
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 357 KESTLHLVLRLRGGM 401
S LHLVL LRGG+
Sbjct: 139 GGSVLHLVLALRGGL 153
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 553 DGRTLSDYNIQKESTLHLVLRLRXGM 630
D +T DY I+ S LHLVL LR G+
Sbjct: 128 DDKTAKDYAIEGGSVLHLVLALRGGL 153
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 217 bits (529), Expect = 8e-57
Identities = 103/126 (81%), Positives = 116/126 (92%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 530
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 531 FAGKQL 548
+AGKQL
Sbjct: 121 YAGKQL 126
Score = 104 bits (250), Expect = 5e-23
Identities = 47/74 (63%), Positives = 60/74 (81%)
Frame = +3
Query: 177 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 356
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 357 KESTLHLVLRLRGG 398
S LHLVL LRGG
Sbjct: 139 GGSVLHLVLALRGG 152
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 553 DGRTLSDYNIQKESTLHLVLRLRXG 627
D +T DYNI+ S LHLVL LR G
Sbjct: 128 DDKTAKDYNIEGGSVLHLVLALRGG 152
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 153 bits (370), Expect = 1e-37
Identities = 80/106 (75%), Positives = 85/106 (80%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 488
IQKESTLHLVLRLRGG K KT T + T + VK +
Sbjct: 61 IQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 100 bits (240), Expect = 8e-22
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 152 bits (368), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGM 401
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 100 bits (240), Expect = 8e-22
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR G+
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGI 77
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 152 bits (368), Expect = 2e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGGM 401
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 100 bits (240), Expect = 8e-22
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXGM 630
EDGRTL+DYNIQKESTLHLVLRLR G+
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGGI 77
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 100 bits (240), Expect = 8e-22
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 151 bits (367), Expect = 3e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 351 IQKESTLHLVLRLRGG 398
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 100 bits (240), Expect = 8e-22
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 50
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRLRXG 627
EDGRTL+DYNIQKESTLHLVLRLR G
Sbjct: 51 EDGRTLADYNIQKESTLHLVLRLRGG 76
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 117 bits (281), Expect = 9e-27
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 347
+M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DY
Sbjct: 85 VMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADY 144
Query: 348 NIQKESTLHLVLRL 389
NIQ +S LHL+ RL
Sbjct: 145 NIQNDSILHLIKRL 158
Score = 86.6 bits (205), Expect = 1e-17
Identities = 58/135 (42%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Frame = +3
Query: 192 LTGKT-ITLEVEPSDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 359
+ GKT I LEV+ S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 360 ESTLHLVL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 503
T+ L + GG M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+G
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQG 120
Query: 504 IPPDQQRLIFAGKQL 548
IP DQQRLIF GKQL
Sbjct: 121 IPVDQQRLIFKGKQL 135
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 550 EDGRTLSDYNIQKESTLHLVLRL 618
EDG TL+DYNIQ +S LHL+ RL
Sbjct: 136 EDGLTLADYNIQNDSILHLIKRL 158
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 108 bits (260), Expect = 3e-24
Identities = 67/142 (47%), Positives = 85/142 (59%), Gaps = 15/142 (10%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK----------- 314
IM IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 49 IMMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSI 108
Query: 315 --QLEDGRTLSDYNIQKESTLHLVLRLRGG--MQIFVKTLTGKTITLEVEASDTIENVKA 482
++ D D I E T LVLRL M+IFV T+ KT LEV+ SDTI+ +K+
Sbjct: 109 NLEVADSSDTIDLKINGEPTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKS 168
Query: 483 KIQDKEGIPPDQQRLIFAGKQL 548
I D+ G P DQQ L G +L
Sbjct: 169 MIHDQGGPPVDQQDLNHLGTKL 190
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 165 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 344
++M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 345 YNIQKESTL 371
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 31.9 bits (69), Expect = 0.42
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI------PPDQQRLIFAGKQLEDGR 332
M I +KTL GK I LEVE S ++K + + PD ++ + GR
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGR 60
Query: 333 TLSDYNIQKESTLHLV--------------LRLRGGMQIFVKTLTGKTITLEV-EASDTI 467
T + Y ++ T+ + RL +I +KT+ GK+I LEV ++SDTI
Sbjct: 61 T-NTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTI 119
Query: 468 E 470
+
Sbjct: 120 D 120
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 351 IQKESTLHLVLRLRGG 398
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 67.3 bits (157), Expect = 9e-12
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQL 50
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 553 DGRTLSDYNIQKESTLHLVLRLRXG 627
D T YN+++ S LHLVL LR G
Sbjct: 52 DDLTAKHYNLERGSVLHLVLALRGG 76
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 81.0 bits (191), Expect = 7e-16
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = +3
Query: 189 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 365
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 366 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 539
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 540 KQL 548
++L
Sbjct: 160 EKL 162
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 183 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 356
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 357 KESTLHLVLR 386
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 81.0 bits (191), Expect = 7e-16
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = +3
Query: 189 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 365
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 366 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 539
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 540 KQL 548
++L
Sbjct: 160 EKL 162
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +3
Query: 183 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQ 356
VKT GK VE I VK +I K G + PD+Q +++ G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 357 KESTLHLVLR 386
+S LHL++R
Sbjct: 175 DDSVLHLLVR 184
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 68.5 bits (160), Expect = 4e-12
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Frame = +3
Query: 189 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 365
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 366 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFA 536
LHLV+RL I V+T+ GK L VE S + VK +I KE GIP D + L
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLD 156
Query: 537 GKQL 548
G++L
Sbjct: 157 GEEL 160
Score = 44.4 bits (100), Expect = 7e-05
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Frame = +3
Query: 27 VKIRCFSTPFCFI*KTKLIIFARSNSVLCS*LFDIQLT--KRNYCIF*I--IMQIFVKTL 194
VK+R S F+ K KL+ R S S + D L K + + + + I V+T+
Sbjct: 57 VKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTV 116
Query: 195 TGKTITLEVEPSDTIENVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 365
GK L VE S + VK +I KE GIP D + L G++L+D R ++D ++
Sbjct: 117 DGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDN 175
Query: 366 TLHLVL 383
+HL++
Sbjct: 176 VIHLLI 181
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 67.3 bits (157), Expect = 9e-12
Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +3
Query: 189 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 365
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 366 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAG 539
LHLVL+L + + V T GK V+ + +K +I ++ +G P D Q ++F G
Sbjct: 100 VLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKG 159
Query: 540 KQL 548
++L
Sbjct: 160 EKL 162
Score = 35.9 bits (79), Expect = 0.026
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 177 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYN 350
+ V T GK V+ + +K +I ++ +G P D Q ++F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 351 IQKESTLHLVLR--LRGGMQIFVKTLTGKTITLE 446
S +HL+++ + ++ T TGK LE
Sbjct: 173 KDGNSVIHLLVKKSVEDTVKREEDTATGKDSLLE 206
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 351 IQKESTLHLVLR 386
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVL 73
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +3
Query: 171 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 347
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 348 NIQKESTLHLVLRLR 392
+I+++++L LV R++
Sbjct: 155 SIEQDASLQLVARMQ 169
Score = 54.4 bits (125), Expect = 7e-08
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Frame = +3
Query: 228 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 407
++++E +K + D + + Q+ + + + E+ R+LS S RL QI
Sbjct: 42 AESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL----QI 97
Query: 408 FVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGRRTHL 566
FV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL R L
Sbjct: 98 FVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSL 151
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 344
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 345 YNIQKESTLHLVL 383
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLGRRTHL 566
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L T L
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTL 58
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 55.6 bits (128), Expect = 3e-08
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 347
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 348 NIQKESTLHLVLRLRGGMQIFVKTLTG 428
Q ++T++LVL LRGG F L G
Sbjct: 67 --QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQL 548
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQI 59
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 341
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 342 DYNIQKESTLHLVLRLRGG 398
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 542
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGK 48
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +3
Query: 165 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 344
+ + + V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 345 YNIQKESTLHLV 380
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 411 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
V+ G ++ T+E+ K I +P +QQRLI+ G+ L
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRIL 67
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 341
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 342 DYNIQKESTLHLVL 383
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLGRRT 560
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L T
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDET 57
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 341
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 342 DYNIQKESTLHLVL 383
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLGRRT 560
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L T
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDET 57
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 183 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 362
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 363 STLHLV 380
T+H+V
Sbjct: 82 HTIHMV 87
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 411 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
++ G +++ T+E+ K + +P +QQRLI+ G+ L
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRIL 67
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 351 IQKESTLHL 377
I ES L L
Sbjct: 61 ILFESRLLL 69
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 315 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 479
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 480 AKIQDKEGIPP 512
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 284
+M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 48 MMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVE-ASDTIE 470
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 347
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 348 NIQKESTLHLVLRLRGG 398
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQL 548
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQI 59
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 341
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 342 DYNIQKESTLHLVL 383
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLGRRTHLV 569
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L T LV
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 341
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 342 DYNIQKESTLHLVL 383
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLGRRTHLV 569
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L T LV
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 341
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 342 DYNIQKESTLHLVL 383
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLGRRTHLV 569
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L T LV
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 341
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 342 DYNIQKESTLHLVL 383
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLGRRTHLV 569
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L T LV
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 344
+++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSD
Sbjct: 10 LIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSD 69
Query: 345 YNIQKESTLHLV 380
Y++++ TL+LV
Sbjct: 70 YHVEEGHTLYLV 81
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 351 IQKESTLHLVL 383
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGRRTHLVRL 575
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++G L L
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSAL 59
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 351 IQKESTL 371
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 351 IQKESTLHL 377
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 347
M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 348 NIQKESTLHLV 380
N+Q S +HL+
Sbjct: 721 NVQPNSLVHLI 731
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 350
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 351 IQKESTLHLVL----RLRGGMQIF 410
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVL 50
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 347
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 348 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 443
N+Q S +HL LR + + + + L G+ +L
Sbjct: 560 NVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +3
Query: 198 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 377
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 378 VLR--LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 488
+ L G +K + + I+ V SD ++ K +
Sbjct: 604 MASQGLHQGEGPILKEASIRPISRTV-VSDKVDQRKPSV 641
Score = 34.7 bits (76), Expect = 0.060
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 426 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGRRTHLVRLQYSKG 590
GK+I L V T++++K+++Q + P Q+LIF GK L + L + G
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSG 598
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 341
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 342 DYNIQKESTLHLVL 383
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 347
++++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 1 MIKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 60
Query: 348 NIQKESTLHL 377
I+ S + L
Sbjct: 61 QIRHNSRILL 70
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVL 51
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 347
++ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 35 MISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 94
Query: 348 NIQKESTLHL 377
I+ S + L
Sbjct: 95 QIRHNSRILL 104
Score = 35.5 bits (78), Expect = 0.034
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVL 85
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 326
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 35.5 bits (78), Expect = 0.034
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 539
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQG 47
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 539
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 311
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 399 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 539
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 171 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 311
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 228 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 398
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 393 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIF 533
G ++FV+T TG + LE++ SD VK K+Q P ++ L F
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTF 85
Score = 34.7 bits (76), Expect = 0.060
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 174 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 335
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 34.3 bits (75), Expect = 0.079
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 213 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 326
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 441 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ 545
L +EA+ T +K + G+ P QQRL+F GK+
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKE 117
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.079
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 192 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 287
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 168 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 326
++ + V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 78 LISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 411 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLGRRTHL 566
V T++ + + ++A+ T +K I GI +QRL+F GK+ R +L
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKEREDREYL 134
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 32.7 bits (71), Expect = 0.24
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 213 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 377
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I KE++ L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKIL 72
Query: 378 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 482
R + GK+I E E + + VKA
Sbjct: 73 SCRQAAPEE-------GKSIMAEEERARRLSRVKA 100
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 441 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQL 548
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKIL 50
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 31.5 bits (68), Expect = 0.56
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +3
Query: 177 IFVKTLTGKTITLEVEP-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 326
+F+ GKT++++V P S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 327 GRTLSDYNIQKESTLHLVLRLRGGMQ 404
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 324 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 500
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 228 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 368
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 369 LHLVLRL 389
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g20930.1 68414.m02621 cell division control protein, putative
cdc2MsF [Medicago sativa] gi|1806146|emb|CAA65982
Length = 315
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 489 QDKEGIPPDQQRLIFAGKQLGRRTHLVRL 575
+D+EG+PP R I + L R H+VRL
Sbjct: 51 EDEEGVPPTTLREISILRMLARDPHIVRL 79
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 29.5 bits (63), Expect = 2.3
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +3
Query: 201 KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 371
KTI + E EP D T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 372 HLVLRLRGGMQIFVKTLTGKTITLEVEASD--TIENVKAKIQDKEGIPPDQQR 524
+V GG GK + +EA D + K I+++E ++R
Sbjct: 160 QMVEGSMGG-----GVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRER 207
>At4g13030.2 68417.m02034 expressed protein
Length = 479
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 517 NSVSSLQASSWEDGRTLSDYNIQKESTLHLV 609
N + S SW D + LSDYNI K +++ LV
Sbjct: 81 NEILSYTPGSWSDVK-LSDYNIPKTTSIMLV 110
>At4g13030.1 68417.m02033 expressed protein
Length = 481
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 517 NSVSSLQASSWEDGRTLSDYNIQKESTLHLV 609
N + S SW D + LSDYNI K +++ LV
Sbjct: 83 NEILSYTPGSWSDVK-LSDYNIPKTTSIMLV 112
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 222 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 377
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At2g15680.1 68415.m01795 calmodulin-related protein, putative
similar to calmodulin-related protein 2, touch-induced
SP:P25070 from [Arabidopsis thaliana]
Length = 187
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 387 DAVQDAVWILFECCSLTTCVRLPAACQQR*DA-VDQEEFLLCLGSS 253
+ V +W L E CSL C R+ A D V+ EEF+ + S+
Sbjct: 140 EEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNMEEFIKMMSSN 185
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 27.9 bits (59), Expect = 6.9
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +3
Query: 297 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 476
L+ AG LE + + +++ ++ L +V R G + VKT G + +V T+ +
Sbjct: 455 LVGAGLLLESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDWTTVTKM 514
Query: 477 KAKIQDKEGIP-----PDQQRLIFAGKQLGRRTHLV 569
+ + IP PDQ L+ Q R +V
Sbjct: 515 SLFNNEIKNIPDDPEFPDQTNLVTLFLQNNRLVDIV 550
>At4g12810.1 68417.m02009 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]
Length = 382
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 268 KKEFLLINSVSSLLASSWKTDARCQTTTFKKNPHCILYCVFVE 396
+K++L++ ++SSL K D R + +N CI+ VF E
Sbjct: 166 RKDYLVVWNISSLFGYHKKGDDRWKVFKPLENERCIIAMVFKE 208
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites at
intron 18
Length = 1606
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 398 ASTKTQYKMQCGFFLNVVV*QRASVFQLLASKDETLLIRRNSFFVLDLRLHILNCVR 228
A+ QYK+ ++ QR L++KDE + R+ + L H +NC+R
Sbjct: 1434 ATICAQYKIAVTLLREILRLQRVQGASALSAKDEMARLSRHLASLPLLAKHRINCIR 1490
>At2g23380.1 68415.m02792 curly leaf protein (CURLY LEAF) /
polycomb-group protein identical to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 902
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 323 RRTHVVRLQHSKRIHTASCTASSWRHADLRENSDRKDHHFGSRSFGHN*EREGEDPRQRR 502
+R S I + SC+ S +H D + + H S + G + R+ P +
Sbjct: 428 KRQKKTEASDSDSIASGSCSPSDAKHKDNEDATSSSQKHVKSGNSGKS--RKNGTPAEVS 485
Query: 503 NSS*STASHLCR--QAAGKTDAP 565
N+S +C+ + A + DAP
Sbjct: 486 NNSVKDDVPVCQSNEVASELDAP 508
>At1g56600.1 68414.m06509 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]
Length = 335
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 323 RRTHVVRLQHSKRIHTASCTASSWRHADLRENSDRKD 433
R + L K +H + A WR EN DR+D
Sbjct: 243 RHPENIELDQVKVVHYCAAGAKPWRFTGEEENMDRED 279
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,486,268
Number of Sequences: 28952
Number of extensions: 301996
Number of successful extensions: 1139
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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