Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0160
         (773 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.        29   9.4  
AY122246-1|AAM52758.1| 1124|Drosophila melanogaster SD03724p pro...    29   9.4  
AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA...    29   9.4  

>U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.
          Length = 2210

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 126 SDPLTEF-MLSRNTDLCGTANKKRKGLPKERRRQKHSSST*NVQVQVTPLRKTHFLEFLG 302
           S+PL +F MLS +       +    G  K R ++  S+ + +      PL+K H+L   G
Sbjct: 685 SEPLVDFAMLSASASGTPNGSGSSNGNTKRRHKKSQSNDSSSPDDHKLPLKKRHYLLTPG 744

Query: 303 KK 308
           ++
Sbjct: 745 ER 746


>AY122246-1|AAM52758.1| 1124|Drosophila melanogaster SD03724p
           protein.
          Length = 1124

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 126 SDPLTEF-MLSRNTDLCGTANKKRKGLPKERRRQKHSSST*NVQVQVTPLRKTHFLEFLG 302
           S+PL +F MLS +       +    G  K R ++  S+ + +      PL+K H+L   G
Sbjct: 701 SEPLVDFAMLSASASGTPNGSGSSNGNTKRRHKKSQSNDSSSPDDHKLPLKKRHYLLTPG 760

Query: 303 KK 308
           ++
Sbjct: 761 ER 762


>AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA
           protein.
          Length = 2217

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 126 SDPLTEF-MLSRNTDLCGTANKKRKGLPKERRRQKHSSST*NVQVQVTPLRKTHFLEFLG 302
           S+PL +F MLS +       +    G  K R ++  S+ + +      PL+K H+L   G
Sbjct: 692 SEPLVDFAMLSASASGTPNGSGSSNGNTKRRHKKSQSNDSSSPDDHKLPLKKRHYLLTPG 751

Query: 303 KK 308
           ++
Sbjct: 752 ER 753


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,291,361
Number of Sequences: 53049
Number of extensions: 620395
Number of successful extensions: 1606
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)