Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0156
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 456 e-128
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 456 e-128
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 235 e-106
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 295 3e-80
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 246 1e-65
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 246 1e-65
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 210 8e-55
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 130 8e-31
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 94 9e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 94 9e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 94 9e-20
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 94 1e-19
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 94 1e-19
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 2e-08
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 1e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 9e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 44 9e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 39 0.003
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 36 0.042
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 35 0.074
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 35 0.074
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.40
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 30 1.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 30 2.1
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 30 2.1
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 30 2.1
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 30 2.1
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.8
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.8
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 456 bits (1123), Expect = e-128
Identities = 214/255 (83%), Positives = 227/255 (89%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTS ADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIG 549
FEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIG
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIG 182
Query: 550 YNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPT 729
YNP AV FVPISG++GDNMLE S+ MPWF GW VER E A K L+EALD+ + P RPT
Sbjct: 183 YNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPT 242
Query: 730 DKPLRLXLQDVYKIG 774
D+PLRL LQDVYKIG
Sbjct: 243 DRPLRLPLQDVYKIG 257
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 456 bits (1123), Expect = e-128
Identities = 214/255 (83%), Positives = 227/255 (89%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTS ADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIG 549
FEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIG
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIG 182
Query: 550 YNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPT 729
YNP AV FVPISG++GDNMLE S+ MPWF GW VER E A K L+EALD+ + P RPT
Sbjct: 183 YNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPT 242
Query: 730 DKPLRLXLQDVYKIG 774
D+PLRL LQDVYKIG
Sbjct: 243 DRPLRLPLQDVYKIG 257
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 235 bits (576), Expect(2) = e-106
Identities = 108/115 (93%), Positives = 112/115 (97%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVA 354
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTS ADCAVL+VA
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 168 bits (408), Expect(2) = e-106
Identities = 77/110 (70%), Positives = 87/110 (79%)
Frame = +1
Query: 445 LIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNPSAVAFVPISGWHGDNMLEPSTK 624
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 625 MPWFXGWXVERXESKADXKCLIEALDAXLAPARPTDKPLRLXLQDVYKIG 774
MPWF GW VER E A K L+EALD+ + P RPTD+PLRL LQDVYKIG
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIG 223
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 295 bits (723), Expect = 3e-80
Identities = 143/169 (84%), Positives = 150/169 (88%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTS ADCAVL+VA GTGE
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGE 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIK 516
FEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I+
Sbjct: 123 FEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQ 168
Score = 45.2 bits (102), Expect = 5e-05
Identities = 31/88 (35%), Positives = 38/88 (43%)
Frame = +2
Query: 509 KSRXKYPHTSRRLATTHLLSLSCPFLDGTETTCWSLQPKCLGSXDGXWSVXKAKLTENAS 688
+S + P +SRR T L D TETTC C GS DG + K L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 689 LKLSMPXWHLPAPLTSPCVXPCKTYTKS 772
+L P H A LT V + T+S
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRS 239
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 246 bits (602), Expect = 1e-65
Identities = 123/253 (48%), Positives = 173/253 (68%), Gaps = 1/253 (0%)
Frame = +1
Query: 16 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 195
K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 196 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFE 375
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTS AD A+L+V A TGEFE
Sbjct: 228 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFE 287
Query: 376 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYI-KKIGY 552
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G+
Sbjct: 288 TGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGF 345
Query: 553 NPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPTD 732
S FVP+SG+ G+N+++ ++ W+ D CL+E +D+ +AP P+D
Sbjct: 346 --SKPKFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSD 390
Query: 733 KPLRLXLQDVYKI 771
PLR+ + DV K+
Sbjct: 391 GPLRIGISDVLKV 403
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 246 bits (602), Expect = 1e-65
Identities = 123/253 (48%), Positives = 173/253 (68%), Gaps = 1/253 (0%)
Frame = +1
Query: 16 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 195
K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 196 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFE 375
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTS AD A+L+V A TGEFE
Sbjct: 246 EERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFE 305
Query: 376 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYI-KKIGY 552
G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G+
Sbjct: 306 TGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGF 363
Query: 553 NPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPTD 732
S FVP+SG+ G+N+++ ++ W+ D CL+E +D+ +AP P+D
Sbjct: 364 --SKPKFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSD 408
Query: 733 KPLRLXLQDVYKI 771
PLR+ + DV K+
Sbjct: 409 GPLRIGISDVLKV 421
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 210 bits (513), Expect = 8e-55
Identities = 93/195 (47%), Positives = 137/195 (70%), Gaps = 1/195 (0%)
Frame = +1
Query: 16 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 195
K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 196 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFE 375
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G + AD AVL+++A GEFE
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFE 226
Query: 376 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYN 555
G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G+N
Sbjct: 227 TGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFN 286
Query: 556 PSA-VAFVPISGWHG 597
P + +VP SG G
Sbjct: 287 PKTDITYVPCSGLTG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 130 bits (315), Expect = 8e-31
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 190 LKAER 204
LK +
Sbjct: 63 LKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 94.3 bits (224), Expect = 9e-20
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
R K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG + + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 370 FEAGISKNGQTREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKK 543
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 544 IGY 552
GY
Sbjct: 200 FGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 94.3 bits (224), Expect = 9e-20
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
R K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG + + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 370 FEAGISKNGQTREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKK 543
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 544 IGY 552
GY
Sbjct: 201 FGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 94.3 bits (224), Expect = 9e-20
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 2/183 (1%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
R K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG + + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 370 FEAGISKNGQTREHALLAFTLGV--KQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKK 543
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 544 IGY 552
GY
Sbjct: 201 FGY 203
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 93.9 bits (223), Expect = 1e-19
Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Frame = +1
Query: 7 ARXKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 180
A K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 40 ATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE--------------- 82
Query: 181 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAG 360
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTS D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 361 TGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIK 540
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 541 KIGYNPSAVAFV 576
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 93.9 bits (223), Expect = 1e-19
Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 2/192 (1%)
Frame = +1
Query: 7 ARXKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 180
A K ++N+ IGH+D GK+T T + + G K KF++
Sbjct: 40 ATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE--------------- 82
Query: 181 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAG 360
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTS D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 361 TGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIK 540
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 541 KIGYNPSAVAFV 576
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/148 (31%), Positives = 67/148 (45%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGIS 387
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 388 KNGQTREHALLAFTLGVKQLIVXVNKMD 471
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 57.2 bits (132), Expect = 1e-08
Identities = 47/148 (31%), Positives = 65/148 (43%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGIS 387
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 388 KNGQTREHALLAFTLGVKQLIVXVNKMD 471
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/113 (34%), Positives = 53/113 (46%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 1e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 151 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSX 327
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 328 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMD 471
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 1e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 31 IVVIGHVDSGKST 69
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.4 bits (100), Expect = 9e-05
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 3/199 (1%)
Frame = +1
Query: 25 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 204
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 205 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAG 381
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 382 ISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGY--N 555
I QT EH LLA ++I+ +NK D E + + E +V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 556 PSAVAFVPISGWHGDNMLE 612
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 44.4 bits (100), Expect = 9e-05
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 180
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 181 LDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLI 348
L+K E +G T+++ K + + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 349 VAAGTG 366
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 180
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 181 LDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLI 348
L+K E +G T+++ K + + + + +ID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 349 VAAGTG 366
V +G
Sbjct: 141 VDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 259 YVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 438
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 439 KQLIVXVNKMDSTEPPYSEPRFEEI 513
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 22 HI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 198
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 199 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIV 351
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +1
Query: 22 HI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 198
HI N+ ++ HVD GK++ L+ I R G +Y +D +
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSRED 63
Query: 199 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIV 351
E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 64 EQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 35.5 bits (78), Expect = 0.042
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +1
Query: 25 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 198
+ + V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 199 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--XADCAVLIVAAG 360
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 361 TGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIK 540
+ GI+ TREH L L + + V + KMD + ++I +VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNI-PMFVLITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 541 KIG 549
K G
Sbjct: 334 KAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.074
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 34.7 bits (76), Expect = 0.074
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.40
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 268 IIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 447
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 448 IVXVNKMDSTEPPYSEPR 501
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 464 LFTXTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 336
LF T+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 527 PHTSRRLATTHLLSLSCPFLD 589
PH SR T + L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 527 PHTSRRLATTHLLSLSCPFLD 589
PH SR T + L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 527 PHTSRRLATTHLLSLSCPFLD 589
PH SR T + L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 527 PHTSRRLATTHLLSLSCPFLD 589
PH SR T + L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 106 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 106 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 25 INIVVIGHVDSGKSTTT 75
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 262 VTIIDAPGHRDFI--KNMITGTSXADCAVLIVAA 357
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.135 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,665,701
Number of Sequences: 27780
Number of extensions: 341357
Number of successful extensions: 1033
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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