Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0156
(774 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 384 e-107
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 384 e-107
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 384 e-107
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 384 e-107
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 204 4e-53
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 201 5e-52
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 110 9e-25
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 99 3e-21
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 57 1e-08
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 57 1e-08
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 53 2e-07
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 3e-07
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 52 4e-07
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 48 7e-06
At5g13650.2 68418.m01585 elongation factor family protein contai... 43 3e-04
At5g13650.1 68418.m01584 elongation factor family protein contai... 43 3e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 41 8e-04
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 41 8e-04
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 8e-04
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 40 0.002
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 40 0.002
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 37 0.013
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 37 0.013
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 36 0.023
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.5
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.5
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.6
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 29 3.4
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 28 7.9
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 28 7.9
At1g49040.2 68414.m05499 stomatal cytokinesis defective / SCD1 p... 28 7.9
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 28 7.9
At1g02730.1 68414.m00226 cellulose synthase family protein simil... 28 7.9
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 384 bits (944), Expect = e-107
Identities = 186/255 (72%), Positives = 207/255 (81%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIG 549
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI EVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 550 YNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPT 729
YNP + FVPISG+ GDNM+E ST + W+ G L+EALD P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 730 DKPLRLXLQDVYKIG 774
DKPLRL LQDVYKIG
Sbjct: 231 DKPLRLPLQDVYKIG 245
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 384 bits (944), Expect = e-107
Identities = 186/255 (72%), Positives = 207/255 (81%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIG 549
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI EVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 550 YNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPT 729
YNP + FVPISG+ GDNM+E ST + W+ G L+EALD P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 730 DKPLRLXLQDVYKIG 774
DKPLRL LQDVYKIG
Sbjct: 231 DKPLRLPLQDVYKIG 245
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 384 bits (944), Expect = e-107
Identities = 186/255 (72%), Positives = 207/255 (81%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIG 549
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI EVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 550 YNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPT 729
YNP + FVPISG+ GDNM+E ST + W+ G L+EALD P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 730 DKPLRLXLQDVYKIG 774
DKPLRL LQDVYKIG
Sbjct: 231 DKPLRLPLQDVYKIG 245
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 384 bits (944), Expect = e-107
Identities = 186/255 (72%), Positives = 207/255 (81%)
Frame = +1
Query: 10 RXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 189
+ K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDK
Sbjct: 3 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62
Query: 190 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGE 369
LKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTS ADCAVLI+ + TG
Sbjct: 63 LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122
Query: 370 FEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIG 549
FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI EVSSY+KK+G
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182
Query: 550 YNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPT 729
YNP + FVPISG+ GDNM+E ST + W+ G L+EALD P RP+
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPS 230
Query: 730 DKPLRLXLQDVYKIG 774
DKPLRL LQDVYKIG
Sbjct: 231 DKPLRLPLQDVYKIG 245
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 204 bits (499), Expect = 4e-53
Identities = 99/251 (39%), Positives = 155/251 (61%), Gaps = 1/251 (0%)
Frame = +1
Query: 19 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 198
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 199 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEA 378
ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G + AD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 379 GISK-NGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYN 555
G GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK V S+++ +
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFK 415
Query: 556 PSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLAPARPTDK 735
S++ ++P+S N++ + R S CL++A+D+ +P R K
Sbjct: 416 DSSLTWIPLSAMENQNLVAAPSD---------NRLSSWYQGPCLLDAVDSVKSPDRDVSK 466
Query: 736 PLRLXLQDVYK 768
PL + + D +
Sbjct: 467 PLLMPICDAVR 477
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 201 bits (490), Expect = 5e-52
Identities = 105/257 (40%), Positives = 154/257 (59%), Gaps = 3/257 (1%)
Frame = +1
Query: 7 ARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 186
A K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 96 ANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMD 155
Query: 187 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
+ ER +G T+++ FET TI+DAPGH+ ++ NMI+G S AD VL+++A G
Sbjct: 156 TNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKG 215
Query: 367 EFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKI 546
EFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI+ ++ ++K
Sbjct: 216 EFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKAS 275
Query: 547 GYNPSA-VAFVPISGWHGDNMLEPSTK--MPWFXGWXVERXESKADXKCLIEALDAXLAP 717
GYN V F+PISG G NM + + PW+ G E LD+ P
Sbjct: 276 GYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG------------PSFFEVLDSIEIP 323
Query: 718 ARPTDKPLRLXLQDVYK 768
R + P R+ + D +K
Sbjct: 324 PRDPNGPFRMPIIDKFK 340
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 110 bits (265), Expect = 9e-25
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Frame = +1
Query: 1 KWARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 180
K+ R K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116
Query: 181 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAG 360
+D ER RGITI+ A ++ET + +D PGH D++KNMITG + D A+L+V+
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 361 TGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIK 540
G QT+EH LLA +GV ++V +NK D + E ++ EV +
Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVD---DAELLELVELEVRELLS 226
Query: 541 KIGYNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKC--LIEALDAXL- 711
+N +PI +E T+ P V+R ++K K L++A+D +
Sbjct: 227 SYEFNGDD---IPIISGSALLAVETLTENP-----KVKRGDNKWVDKIYELMDAVDDYIP 278
Query: 712 APARPTDKPLRLXLQDVYKI 771
P R T+ P L ++DV+ I
Sbjct: 279 IPQRQTELPFLLAVEDVFSI 298
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 99.1 bits (236), Expect = 3e-21
Identities = 79/257 (30%), Positives = 119/257 (46%), Gaps = 1/257 (0%)
Frame = +1
Query: 4 WARXKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 183
+ R K H+N+ IGHVD GK+T T + K E GK +
Sbjct: 61 FTRNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEI 105
Query: 184 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGT 363
DK E++RGITI A ++ET+K + +D PGH D++KNMITG + D +L+V+
Sbjct: 106 DKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPD 165
Query: 364 GEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKK 543
G QT+EH LLA +GV L+ +NK+D + P E E+ S+ K
Sbjct: 166 GPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKF 218
Query: 544 IGYNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALDAXLA-PA 720
G + + +S G N + +A K L++A+D + P
Sbjct: 219 PGDDIPIIRGSALSALQGTN----------------DEIGRQAILK-LMDAVDEYIPDPV 261
Query: 721 RPTDKPLRLXLQDVYKI 771
R DKP + ++DV+ I
Sbjct: 262 RVLDKPFLMPIEDVFSI 278
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGIS 387
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 388 KNGQTREH 411
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/128 (32%), Positives = 61/128 (47%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGIS 387
+GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176
Query: 388 KNGQTREH 411
+ Q R +
Sbjct: 177 VDRQMRRY 184
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 52.8 bits (121), Expect = 2e-07
Identities = 47/152 (30%), Positives = 70/152 (46%)
Frame = +1
Query: 16 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 195
K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140
Query: 196 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFE 375
E+ERGITI A K+ + IID PGH DF + D A+ + +
Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLF-----DSV 195
Query: 376 AGISKNGQTREHALLAFTLGVKQLIVXVNKMD 471
AG+ +T A GV + I VNKMD
Sbjct: 196 AGVEPQSETVWRQ--ADKYGVPR-ICFVNKMD 224
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/113 (31%), Positives = 53/113 (46%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI ++ HVD GK+T HLI GG + GK F +D L E+
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 52.0 bits (119), Expect = 4e-07
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 208 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFE 375
RGITI + + +E + + + +ID PGH DF + + + A+L+V A G E
Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VE 190
Query: 376 AGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYI 537
A QT + LA + ++I +NK+D P +EP E++ E+ I
Sbjct: 191 A------QTLANVYLALENNL-EIIPVLNKIDL---PGAEP--EKVLREIEEVI 232
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 48.0 bits (109), Expect = 7e-06
Identities = 54/177 (30%), Positives = 76/177 (42%), Gaps = 9/177 (5%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N +I H+D GKST L+ G I K G G +Y LDKL +RE
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKL--QRE 109
Query: 208 RGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAG 360
RGIT+ E S Y + +ID PGH DF + S A+L+V A
Sbjct: 110 RGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAA 169
Query: 361 TGEFEAGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSS 531
G QT + LAF + ++ +NK+D P ++P E +K ++ S
Sbjct: 170 QG-------VQAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP--ERVKAQLKS 213
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 42.7 bits (96), Expect = 3e-04
Identities = 46/159 (28%), Positives = 66/159 (41%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGIS 387
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 185
Query: 388 KNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRF 504
QTR A G ++V VNK+D P + P F
Sbjct: 186 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 42.7 bits (96), Expect = 3e-04
Identities = 46/159 (28%), Positives = 66/159 (41%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 208 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGIS 387
RGITI V IID PGH DF + + D +L+V + G
Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 184
Query: 388 KNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRF 504
QTR A G ++V VNK+D P + P F
Sbjct: 185 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/95 (25%), Positives = 45/95 (47%)
Frame = +1
Query: 247 TSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 426
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 427 TLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSS 531
+ +K +I+ NK+D + + E I+ +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/95 (25%), Positives = 45/95 (47%)
Frame = +1
Query: 247 TSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 426
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 427 TLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSS 531
+ +K +I+ NK+D + + E I+ +++
Sbjct: 178 MMRLKHIIILQNKIDLINEKAATEQHEAIQKFITN 212
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/91 (26%), Positives = 45/91 (49%)
Frame = +1
Query: 259 YVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 438
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 439 KQLIVXVNKMDSTEPPYSEPRFEEIKXEVSS 531
K +I+ NK+D + + + E+I+ +++
Sbjct: 174 KDIIIIQNKIDLIQENEAIKQHEDIQRFITN 204
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 195
N+ VI HVD GKST T L+ G I + + + A E +G + K + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 196 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIV 351
E ++ + ++Y + +ID+PGH DF + D A+++V
Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 241 FETSKY----YVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTRE 408
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 409 HALLAFTLGVKQLIVXVNKMD 471
H + +K +I+ NK+D
Sbjct: 166 HLAAVEIMQLKHIIILQNKID 186
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.1 bits (82), Expect = 0.013
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 208 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 37.1 bits (82), Expect = 0.013
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Frame = +1
Query: 28 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 207
N+ ++GH+ GK+ L+ + + K EK KY D E+E
Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187
Query: 208 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTG 366
R I+I + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 36.3 bits (80), Expect = 0.023
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Frame = +1
Query: 262 VTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 441
+T +D PGH F + G + D VL+VAA G QT E A + V
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321
Query: 442 QLIVXVNKMDSTEPPYSEPRFEEIKXEVSS---YIKKIGYNPSAV 567
++V +NK D P + P E++K +++S ++ IG N AV
Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTSEGIELEDIGGNVQAV 361
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 268 IIDAPGHRDFIKNMITGTSXADCAVLIV 351
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 268 IIDAPGHRDFIKNMITGTSXADCAVLIV 351
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 268 IIDAPGHRDFIKNMITGTSXADCAVLIV 351
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 262 VTIIDAPGHRDFIKNMITGTSXADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 441
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 442 QLIVXVNKMD 471
I+ +NK+D
Sbjct: 611 -FIIALNKVD 619
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Frame = +1
Query: 187 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSXADCAVLIVA 354
K+ A GIT I +K +D PGH F G D A+++VA
Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584
Query: 355 AGTG 366
A G
Sbjct: 585 ADDG 588
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +1
Query: 271 IDAPGHRDFIKNMITGTSXADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 447
I GH D+ + T +C + L+V TG F +KNG R+ LG +
Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285
Query: 448 IVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYN 555
+ +DS E +E++ E S+ K++G N
Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 472 STEPPYSEPRFEEIKXEVSSYIKKIGYNPSAVAFVPIS 585
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 472 STEPPYSEPRFEEIKXEVSSYIKKIGYNPSAVAFVPIS 585
+TE + P+ E K E+S++I IG+ V F P S
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At1g49040.2 68414.m05499 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 909
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 403 REHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNP--SAVAFV 576
RE +L + ++ L + + K+ S E P S + I + S + IG + +
Sbjct: 541 RERMVLDIQVKLQGLWLRLLKLGSDEDPLSSFEYGTILALIESDAEGIGGSGFIECIREH 600
Query: 577 PISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALD 702
SGWHG E + V R S++D + +AL+
Sbjct: 601 LYSGWHGQLSEEQFIAVKELLKMAVGRAASRSDLSTVRDALE 642
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 403 REHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFEEIKXEVSSYIKKIGYNP--SAVAFV 576
RE +L + ++ L + + K+ S E P S + I + S + IG + +
Sbjct: 541 RERMVLDIQVKLQGLWLRLLKLGSDEDPLSSFEYGTILALIESDAEGIGGSGFIECIREH 600
Query: 577 PISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKCLIEALD 702
SGWHG E + V R S++D + +AL+
Sbjct: 601 LYSGWHGQLSEEQFIAVKELLKMAVGRAASRSDLSTVRDALE 642
>At1g02730.1 68414.m00226 cellulose synthase family protein similar
to cellulose synthase catalytic subunit [gi:13925881]
from Nicotiana alata, cellulose synthase-4 [gi:9622880]
from Zea mays
Length = 1181
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +1
Query: 505 EEIKXEVSSYIKKIGYNPSAVAFVPISGWHGDNMLEPSTKMPWFXGWXVERXESKADXKC 684
EE++ + +G NP VP + W D P T W G E S+ D
Sbjct: 532 EELRAKKKQMEMMMGNNPQETVIVPKATWMSDGSHWPGT---WSSG---ETDNSRGDHAG 585
Query: 685 LIEALDAXLAPARPTDKPL 741
+I+A+ LAP P +P+
Sbjct: 586 IIQAM---LAP--PNAEPV 599
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,903,008
Number of Sequences: 28952
Number of extensions: 323218
Number of successful extensions: 935
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1726528800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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