Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0155
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.6  

>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -1

Query: 626 RTPPXRIPXGSSKKEMRSLDPVXCSSVRWPAKSSVTKL 513
           + PP   P  SS   + S DP   SS      SS+  L
Sbjct: 213 KIPPAEFPTTSSSSALESPDPASRSSCLGSNTSSMLSL 250


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 371 SHRRTRVLFVTAWVLPTLVS 430
           S +R RVL + AW+L  L S
Sbjct: 157 SWKRARVLVMLAWLLSILFS 176


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = +1

Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHAD 459
           + CP CN+       L +HV   + +
Sbjct: 375 FACPICNKRFMRSDHLAKHVKTHNGN 400


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 2   FAWKFLL*TLY 34
           F W FLL TLY
Sbjct: 278 FGWSFLLFTLY 288


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 2   FAWKFLL*TLY 34
           F W FLL TLY
Sbjct: 204 FGWSFLLFTLY 214


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +1

Query: 265 SGATTNQHTTEHPMQC 312
           +GAT   HTT +   C
Sbjct: 72  NGATCQDHTTHYTCHC 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,762
Number of Sequences: 336
Number of extensions: 3636
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)