Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0155
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 47 1e-05
04_04_0239 - 23843235-23843243,23843334-23844047,23844138-238442... 47 1e-05
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 47 1e-05
03_05_1146 - 30735010-30735216,30735336-30735650,30740169-307401... 43 2e-04
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 42 4e-04
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 35 0.047
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 34 0.082
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 33 0.25
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564... 32 0.44
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 30 1.3
05_07_0110 - 27747789-27747897,27748375-27748568,27748811-277488... 30 1.3
08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671 30 1.8
05_03_0382 + 13342764-13342958,13343178-13343278,13343373-133434... 30 1.8
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 30 1.8
12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403 29 2.3
07_01_0675 + 5055842-5055950,5056036-5056193,5056276-5057067,505... 29 2.3
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 29 2.3
03_02_0311 - 7320832-7321554 29 2.3
01_07_0337 + 42838260-42838344,42838972-42839084,42839652-428397... 29 2.3
09_06_0259 - 21906612-21907109 29 3.1
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 29 3.1
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 29 3.1
04_03_0964 - 21290107-21290667,21290780-21291130,21291230-212914... 29 3.1
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 29 4.1
08_02_1156 - 24760332-24761530,24762757-24763648 28 5.4
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631... 28 5.4
12_02_1285 - 27550548-27550709,27551473-27551516,27551588-275516... 28 7.1
05_01_0058 + 415145-415210,415888-415906,415971-416083,416495-41... 28 7.1
04_01_0268 - 3585907-3588086,3590167-3590326 28 7.1
09_04_0470 + 17875119-17875239,17875327-17875496,17875637-178757... 27 9.4
08_02_1024 - 23723560-23723693,23723835-23724041,23724183-237243... 27 9.4
08_02_0611 + 19317969-19318778 27 9.4
04_03_0965 - 21296608-21297165,21297332-21297682,21297781-212979... 27 9.4
02_05_1187 + 34820577-34820757,34820930-34820961,34832101-348321... 27 9.4
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYE---SGATTNQHTTEHPMQCILSRSDFDLYY 345
CD C RR+ C IC D+DLC TCYE + H+ +HPM I D +
Sbjct: 2609 CDGCSTVPILRRRWHCNICPDFDLCETCYEILDADRLPAPHSRDHPMSAIPIELD---TF 2665
Query: 346 GGE 354
GGE
Sbjct: 2666 GGE 2668
>04_04_0239 -
23843235-23843243,23843334-23844047,23844138-23844287,
23844389-23844601,23844697-23844811,23844919-23846300,
23847217-23847279
Length = 881
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 130 QRRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 291
+ S+A+ H + CD C G RYK I DYDLC TC+ N++T
Sbjct: 450 KHESMAQHTLHRWIQCDGCGVTPIAGSRYKSNIKDDYDLCNTCFSRMGNVNEYT 503
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLIC---IDYDLCATCYES-----GATTNQHTTEHPMQ 309
H V CDSC RG+RYKC C I +DLC CY + G HT +H M+
Sbjct: 234 HIGVGCDSCGMYPIRGKRYKCKDCTELIGFDLCEECYNTKSKLPGRFNQHHTPDHRME 291
>03_05_1146 -
30735010-30735216,30735336-30735650,30740169-30740191,
30740591-30740666,30740764-30740889,30740968-30741033,
30741296-30741539,30741639-30741691
Length = 369
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFDL 339
C+ C K+ R KC C D+DLC C+ GA H + HP + ++ F L
Sbjct: 53 CNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYR-VMDNLSFPL 106
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +1
Query: 151 MNRHEXVSCDSCLKNNFRGRRYKCLIC--IDYDLCATCYESGATT-----NQHTTEHPMQ 309
++ H V CD C +GRRY C C DLC C+ +G+T +HT +H M+
Sbjct: 495 LHTHVGVGCDGCGVFPIQGRRYSCKECEAPGLDLCEKCFMTGSTAEGRFDQKHTADHDME 554
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 291
H + CD C G RYK DYDLC C+ ++T
Sbjct: 425 HRWIQCDGCGVQPIVGPRYKSKTKEDYDLCDACFHRMGNEVEYT 468
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 34.3 bits (75), Expect = 0.082
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
C+SC + R +RY C D+DLC CY+ G
Sbjct: 277 CNSCSVDCSR-KRYHCRTQADFDLCCDCYDKG 307
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
C+SC + + +RY C D+DLC+ CY G
Sbjct: 286 CNSCSVDCSK-KRYHCRTQADFDLCSDCYNEG 316
>03_04_0044 +
16754638-16754676,16755472-16755598,16756325-16756451,
16756866-16757431,16757896-16758211,16758373-16758613,
16758734-16758823,16759343-16759780,16759877-16760185,
16760392-16760406
Length = 755
Score = 31.9 bits (69), Expect = 0.44
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 264 LVASSAQVVIDANQTFVSSSSKVIFQTRITADSFMAI--HFRQRTSLKKHLL 115
+V SSA +D NQ ++ SK + QT ++ D + I H R S + HL+
Sbjct: 309 VVHSSAASSVDGNQAHMAGLSKKLSQTNVSEDEHVIIPAHLRVPDSERTHLI 360
>06_03_1313 - 29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYES 267
H SC C GRR+ C C + +C CY +
Sbjct: 1265 HLQYSCSHCCTFMVSGRRWVCNECKSFYICDRCYNA 1300
>05_07_0110 -
27747789-27747897,27748375-27748568,27748811-27748888,
27749925-27750064,27750197-27750269
Length = 197
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGEPNFVTDDFAGHLTLEH 558
+ CP+C L H+ EH A CP+C+ + D H+T++H
Sbjct: 42 FACPYCYE-DHDVVSLCAHLEEEHPFEPHAAPCPICSDK-------IAKDMLNHITVQH 92
>08_02_0572 - 18842539-18842950,18843242-18843613,18844947-18845671
Length = 502
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 288
CD+C K G RY CL C D ++ C + +T H
Sbjct: 294 CDAC-KEPGDGPRYHCLTCEDLNMHKFCAHAPSTLYHH 330
>05_03_0382 +
13342764-13342958,13343178-13343278,13343373-13343459,
13343559-13343709,13343826-13344116,13346058-13346197,
13346276-13346467,13346559-13346631,13346708-13346852,
13347017-13347124,13347213-13347306,13348245-13348324,
13348665-13348738,13349236-13349253
Length = 582
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 241 DLCATCYESGATTNQHTTEHPMQCILSRSDFDLYYGGEALTLEQSQAYTCPFC 399
D A+C++ Q T ++ +C+ +R YG EA + +TCP C
Sbjct: 72 DFAASCHKIKKNNKQCTIQYCRKCLFNR------YGQEAEKVANDGTWTCPKC 118
>02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYES 267
H SC C G+R+ C C + +C CY++
Sbjct: 1367 HLQYSCSHCCTLMVSGKRWVCHQCRSFYICDKCYDA 1402
>12_01_1072 - 11106298-11106660,11109176-11109463,11109537-11110403
Length = 505
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = -1
Query: 608 IPXGSSKKEMRSLDPVXCSSVRWPAKSSVTKLGSPPGIDAH--TGQTTARVVSACSAVTC 435
+ G + D S V W A ++ PP DA TG++ + + + V
Sbjct: 146 VQVGHGFSDSEGSDGTPTSPVLWRATCRGRRMSPPPASDAEAATGRSASAPAAGANVVED 205
Query: 434 SMRPVSVKPMRLQKGHVYACDCS 366
V P+R Q+G A + S
Sbjct: 206 ERVDVVPSPIRQQEGKAPAVEAS 228
>07_01_0675 +
5055842-5055950,5056036-5056193,5056276-5057067,
5057544-5057760,5058280-5058449,5058986-5059630
Length = 696
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -1
Query: 596 SSKKEMRSLDPVXCSSVRWPAKSSVTKLGSPPGIDAHTGQTTARVVSACSAVTCSM 429
+SK R +DP C P KSS PPG + +G A VV A +A ++
Sbjct: 634 TSKGVYRVVDPAECGYA-CPIKSSAPGTSPPPG-SSPSGGAAAAVVPAAAATMAAL 687
>05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 283 QHTTEHPMQCILSRSD-FDLYYGGEALTLEQSQAYTCPFCN--RMGFTDTGLMEHVTA 447
+HT++ + SD + L G+ + Y CPFC+ + + GL++H A
Sbjct: 833 EHTSDEDPELEAYGSDTYALLEAGDIKVMNDKNMYQCPFCSDEKNDYNAHGLLQHALA 890
>03_02_0311 - 7320832-7321554
Length = 240
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 355 ALTLEQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
A E ++ +TC +C R F+ L H A + TLA
Sbjct: 71 ATAREPARVFTCNYCQRKFFSSQALGGHQNAHRRERTLA 109
>01_07_0337 +
42838260-42838344,42838972-42839084,42839652-42839729,
42839831-42840054,42840084-42840128,42840156-42840264
Length = 217
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPG 504
+ CPFC + + H+ EH T VCP+CA G
Sbjct: 37 FPCPFCY-IEVEVPFICNHLQEEHCFDTRNAVCPLCADNIG 76
>09_06_0259 - 21906612-21907109
Length = 165
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 355 ALTLEQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
A ++ +A++C +C+R F+ L H A + TLA
Sbjct: 40 AAAVDPREAFSCNYCHRKFFSSQALGGHQNAHKLERTLA 78
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 539 PAKSSVTKLGSPPGIDAHTGQTTARVVSACSA--VTCSMRPVSVKPMRLQKGHV 384
PAK S GSPPG H Q AR++++ A V P + +R ++ H+
Sbjct: 128 PAKPSPLA-GSPPGAATHLQQPAARMLASSPAKRVLSVFSPSAAGSLRRERNHL 180
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -1
Query: 539 PAKSSVTKLGSPPGIDAHTGQTTARVVSACSA--VTCSMRPVSVKPMRLQKGHV 384
PAK S GSPPG H Q AR++++ A V P + +R ++ H+
Sbjct: 128 PAKPSPLA-GSPPGAATHLQQPAARMLASSPAKRVLSVFSPSAAGSLRRERNHL 180
>04_03_0964 -
21290107-21290667,21290780-21291130,21291230-21291411,
21291505-21291631,21291956-21292168,21292627-21292755,
21292891-21293616
Length = 762
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 365 WNSHRRTRVLFVTAWVLPTL 424
WN+HR R++ V+AW L L
Sbjct: 611 WNNHRMQRIISVSAWTLAFL 630
>08_02_1034 + 23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 28.7 bits (61), Expect = 4.1
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Frame = -1
Query: 596 SSKKEMRSLDPVXCSSVRW-PAKSSVTKLGSPPGI-DAHTGQTTARVVSACSAVTCSM-- 429
SS ++ V C + W P S + G D H G+ +RV++ CS S
Sbjct: 873 SSHLNKLTIIQVVCEELEWLPFYSGDVPAATIEGREDVHKGEIISRVLNVCSYWMTSFIK 932
Query: 428 ------RPVSVKPMR-LQKGHVYACDC 369
P +VK R L KGH DC
Sbjct: 933 YSSWLENPSNVKAARFLSKGHSMLSDC 959
>08_02_1156 - 24760332-24761530,24762757-24763648
Length = 696
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 335 IYIMEEKH*HWNSHRRTRVLFVTAWVLPTLVSWSM*RRNTLTQP 466
+YI EE S+ TR++F T LP L+ W++ T+P
Sbjct: 214 VYIAEE-----GSYNATRLIFETVSALPALLDWAISNSTCGTKP 252
>05_03_0281 +
11560402-11560569,11561373-11561579,11562966-11563174,
11563261-11563309,11563611-11563673,11563799-11565472
Length = 789
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 388 CPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGEPNFVT--DDFAGHLTLEH 558
C FC + D L H++ EH C +C G+ ++ DD H +EH
Sbjct: 166 CEFCRSSFYGDNELYTHMSREHYS------CHICQRQHPGQYDYFRNYDDLERHNAMEH 218
>12_02_1285 -
27550548-27550709,27551473-27551516,27551588-27551651,
27551733-27552463,27552754-27552798,27553663-27554167
Length = 516
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +2
Query: 284 NTLPNTPCSAFFLEV----ILIYIMEEKH*HWNSHRRTRV 391
N PC AF ++ I++++ME H N RRTR+
Sbjct: 153 NNATQGPCRAFLADLTEGMIVLFVMEMLEFHENDPRRTRI 192
>05_01_0058 +
415145-415210,415888-415906,415971-416083,416495-416572,
416731-416975,417083-417188
Length = 208
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 388 CPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCA 492
CPFC + L +H+ EH VCP+CA
Sbjct: 39 CPFCY-IEVEVHFLCDHLQEEHCFDMKNAVCPICA 72
>04_01_0268 - 3585907-3588086,3590167-3590326
Length = 779
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 494 QCQVVSLISSRMTLLAILHSSTXPGLEISSLF 589
Q QV+ +S+ M L + S PGL++ SL+
Sbjct: 556 QVQVIMALSNYMAFLVAVRPSMLPGLKLRSLY 587
>09_04_0470 +
17875119-17875239,17875327-17875496,17875637-17875784,
17876491-17876697,17877550-17877656
Length = 250
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 229 CIDYDLCATCYESGATTNQHTTEHPMQCILSR 324
C D+ + C+ +GAT H +HP +LS+
Sbjct: 93 CDDFSIGVFCFPAGATLPLH--DHPQMVVLSK 122
>08_02_1024 -
23723560-23723693,23723835-23724041,23724183-23724327,
23724440-23724615,23724713-23724851
Length = 266
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 229 CIDYDLCATCYESGATTNQHTTEHPMQCILSR 324
C D+ + C+ +GAT H +HP +LS+
Sbjct: 101 CADFSMGVFCFPAGATLPLH--DHPEMVVLSK 130
>08_02_0611 + 19317969-19318778
Length = 269
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 288
CD C + G RY+C C ++DL C AT QH
Sbjct: 33 CDGCQEPGGDGPRYRCAPC-NFDLHTDCALPPATL-QH 68
>04_03_0965 -
21296608-21297165,21297332-21297682,21297781-21297965,
21298076-21298172,21298859-21299071,21299206-21299334,
21299442-21299567,21301280-21301999
Length = 792
Score = 27.5 bits (58), Expect = 9.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 365 WNSHRRTRVLFVTAWVL 415
WN+HR R++ +AW+L
Sbjct: 642 WNNHRMQRIISASAWLL 658
>02_05_1187 +
34820577-34820757,34820930-34820961,34832101-34832159,
34832772-34833183
Length = 227
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 481 DKLRQGLCQRVPPLHAP*DQCR 416
D+L Q + QRV PL P D CR
Sbjct: 7 DRLPQDVLQRVIPLETPRDACR 28
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,537,109
Number of Sequences: 37544
Number of extensions: 369968
Number of successful extensions: 907
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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