Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0155
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical pr... 100 1e-21
AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein ( Cae... 58 7e-09
AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin ... 58 7e-09
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 50 1e-06
AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical ... 48 6e-06
U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascula... 41 6e-04
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 36 0.018
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 36 0.032
AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical ... 36 0.032
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 30 1.2
Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 29 3.7
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 28 6.4
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 28 6.4
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 28 6.4
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 28 6.4
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 28 6.4
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 28 6.4
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 27 8.5
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 27 8.5
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 27 8.5
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 27 8.5
>L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical
protein ZK652.6a protein.
Length = 575
Score = 100 bits (239), Expect = 1e-21
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQ--------HTTEHPMQCI 315
HE VSCD C F G RYKCL C DYDLC +C+ + +Q H HPMQ I
Sbjct: 9 HEGVSCDGCAFTAFAGNRYKCLRCSDYDLCFSCFTTKNYGDQQTIADIPIHDESHPMQLI 68
Query: 316 LSRSDFDLYYGGEALTLEQSQ---AYTCPFCNRMGFTDTGLMEHVTAEHADTT-LAVVCP 483
LS DFDL Y G+ + ++TCP+CN G T+ HV ++H + +V+CP
Sbjct: 69 LSSVDFDLVYQGDPTRHYDERKIVSFTCPYCNITGLTERQFGTHVLSQHPEAPGYSVICP 128
Query: 484 VC 489
+C
Sbjct: 129 LC 130
>AJ131742-1|CAA10498.1| 590|Caenorhabditis elegans protein (
Caenorhabditis elegansmRNA for dystrobrevin. ).
Length = 590
Score = 57.6 bits (133), Expect = 7e-09
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 136 RSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQ 309
R + N + V CD+C +F G RYKC C +Y LC +C+ G T+ H+ EH M+
Sbjct: 251 RMASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMK 308
>AF098989-4|AAK18956.2| 590|Caenorhabditis elegans Dystrobrevin
homolog protein 1 protein.
Length = 590
Score = 57.6 bits (133), Expect = 7e-09
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 136 RSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQ 309
R + N + V CD+C +F G RYKC C +Y LC +C+ G T+ H+ EH M+
Sbjct: 251 RMASVSNVYHPVVCDACQVRSFTGFRYKCQRCANYQLCQSCFWRGRTSQNHSNEHEMK 308
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 133 RRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQ 309
R +++ +H C+ C G RY+CL C + DLC C+ S T H T HPMQ
Sbjct: 3293 RLVISESTKHAS-KCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHRTNHPMQ 3350
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 133 RRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQ 309
R +++ +H C+ C G RY+CL C + DLC C+ S T H T HPMQ
Sbjct: 3293 RLVISESTKHAS-KCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHRTNHPMQ 3350
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +1
Query: 133 RRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQ 309
R +++ +H C+ C G RY+CL C + DLC C+ S T H T HPMQ
Sbjct: 3293 RLVISESTKHAS-KCNVCKMFPIIGIRYRCLTCFNCDLCQNCFFSQRTAKSHRTNHPMQ 3350
>AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical
protein Y32B12A.1 protein.
Length = 177
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 291
H V CDSC G R+KC IC DYD+C++C E+ QHT
Sbjct: 130 HPIVRCDSCY-TTITGHRFKCTICTDYDICSSC-EARNAHAQHT 171
>U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical
protein C06G3.6 protein.
Length = 498
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1
Query: 133 RRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
+ S HE SCD C ++ G R+KC IC +YDLC TC +G
Sbjct: 183 KNSFKNKEVHE-ASCDKC-QDLIIGHRFKCAICYNYDLCETCEAAG 226
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATC 258
SCD+CL + G R+KCL C DYDLC C
Sbjct: 183 SCDACL-GDIIGHRFKCLECADYDLCEKC 210
>Z82055-5|CAB04847.1| 229|Caenorhabditis elegans Hypothetical
protein T26H2.5 protein.
Length = 229
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 154 NRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 288
N CDSC GRRYKC +C D+D+C C E+ + QH
Sbjct: 139 NSEFYAKCDSC-GTQIAGRRYKCTMCADFDICERC-EAKSVHLQH 181
>AF078787-7|AAC26954.2| 518|Caenorhabditis elegans Vegf (vascular
endothelial growthfactor) receptor family protein 2
protein.
Length = 518
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/55 (45%), Positives = 26/55 (47%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFDL 339
CD C RYKC IC DYDLC C N H H M ILS SD +L
Sbjct: 452 CDECKAECNWNNRYKCTICADYDLCRQC----EAKNLH-ANHAMLRILS-SDTEL 500
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 36.3 bits (80), Expect = 0.018
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCL-ICIDYDLCATCY 261
C SC F G RY C IC DY +CATC+
Sbjct: 99 CASCGSKVFPGLRYVCPEICPDYGICATCF 128
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 35.5 bits (78), Expect = 0.032
Identities = 43/163 (26%), Positives = 60/163 (36%), Gaps = 8/163 (4%)
Frame = +1
Query: 100 RPFWCQQVFFQRRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATT 279
RPF C+ R + + RH+ + DS + +KC C C+ +T
Sbjct: 78 RPFVCKVCGKAFRQASTLCRHKIIHTDS--------KPHKC------KTCGKCFNRSSTL 123
Query: 280 NQHTTEH----PMQCILSRSDFDLY--YGGEALTLEQSQAYTCPFCNRMGFTDTGLMEHV 441
N H H P C + F Y LT E ++ ++C C+R L H+
Sbjct: 124 NTHVRIHQGFKPFVCEICGKGFHQNGNYKNHRLTHEDTKKFSCSICSRAFHQSYNLAFHM 183
Query: 442 TA--EHADTTLAVVCPVCASMPGGEPNFVTDDFAGHLTLEHXT 564
EH T C VC+ G NF D HL H T
Sbjct: 184 FTHEEHKPFT----CHVCSK--GFCRNF---DLKKHLRKMHMT 217
>AC024772-1|AAF60536.2| 242|Caenorhabditis elegans Hypothetical
protein Y40C5A.1 protein.
Length = 242
Score = 35.5 bits (78), Expect = 0.032
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATC 258
H C +C + G RY CL C DYD+C C
Sbjct: 161 HHDTPCRNCFRI-IVGSRYHCLQCPDYDICGDC 192
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Frame = +1
Query: 370 QSQAYTCPFCNRMGFTDTGLMEH----VTAEHADTTLAVVC----PVCASMPGGEP---- 513
+S Y CP CNR L H +A+HA LA + P CAS P P
Sbjct: 313 KSGVYQCPNCNRNLANARNLQRHRQTCGSAQHAAPQLAAMLQRSPPPCASAPPVAPPTAP 372
Query: 514 --NFVTDDFAGHLTLEHXTGSRDLISFLDEP 600
+F + G+LTL + + S S L P
Sbjct: 373 STSFQHHNSTGNLTLSYSSSSSRHQSSLYSP 403
>Z82279-1|CAB05259.2| 321|Caenorhabditis elegans Hypothetical
protein R03C1.1 protein.
Length = 321
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = -1
Query: 557 CSSVRWPAKSSVTKLGSPPGIDAHTGQTTARVVSACSAVTCSMRPVSVKPMR--LQKGHV 384
CS + PA S + +GS DA A ++A S T M ++ +Q
Sbjct: 49 CSCAKGPADGSSSSIGSGVQYDAPQSADIANQLTAMSQQTTGMSGARCGCIQIVIQGAPQ 108
Query: 383 YACDCSNVNASP 348
Y C C + + +P
Sbjct: 109 YNCQCGDQSGNP 120
>Z81556-2|CAB04525.2| 445|Caenorhabditis elegans Hypothetical
protein F58G1.2 protein.
Length = 445
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 388 CPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVC 489
CPFC++ D H+T +H + V C C
Sbjct: 231 CPFCDKRFRNDISFNNHLTKKHPECAEFVQCLHC 264
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCP 483
Y CP+C+ G +HV H + CP
Sbjct: 112 YRCPYCDDAYMEPAGYQQHVQQRHPGLSATYGCP 145
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 353 KH*HWNSHRRTRVLFVTAWVLPTLV 427
K+ W S +T++L V +W+LP ++
Sbjct: 133 KYLKWQSPTKTQLLIVMSWLLPAII 157
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 353 KH*HWNSHRRTRVLFVTAWVLPTLV 427
K+ W S +T++L V +W+LP ++
Sbjct: 133 KYLKWQSPTKTQLLIVMSWLLPAII 157
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 353 KH*HWNSHRRTRVLFVTAWVLPTLV 427
K+ W S +T++L V +W+LP ++
Sbjct: 133 KYLKWQSPTKTQLLIVMSWLLPAII 157
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 353 KH*HWNSHRRTRVLFVTAWVLPTLV 427
K+ W S +T++L V +W+LP ++
Sbjct: 133 KYLKWQSPTKTQLLIVMSWLLPAII 157
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 353 KH*HWNSHRRTRVLFVTAWVLPTLV 427
K+ W S +T++L V +W+LP ++
Sbjct: 133 KYLKWQSPTKTQLLIVMSWLLPAII 157
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 353 KH*HWNSHRRTRVLFVTAWVLPTLV 427
K+ W S +T++L V +W+LP ++
Sbjct: 133 KYLKWQSPTKTQLLIVMSWLLPAII 157
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 265 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 293
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 269 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 297
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 265 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 293
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 269 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 297
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 269 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 297
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 265 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 293
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 382 YTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
+ CPFC + T L +H+T +HAD + A
Sbjct: 269 HICPFCGKSYTQQTYLQKHMT-KHADRSKA 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,076,367
Number of Sequences: 27780
Number of extensions: 331588
Number of successful extensions: 824
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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