Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0155
(635 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 49 3e-06
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 46 2e-05
At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identic... 46 3e-05
At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identic... 46 3e-05
At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identic... 46 3e-05
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 45 5e-05
At5g26990.1 68418.m03220 drought-responsive family protein non-c... 40 0.002
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 38 0.006
At5g49230.1 68418.m06094 drought-responsive family protein simil... 37 0.010
At4g24690.1 68417.m03534 ubiquitin-associated (UBA)/TS-N domain-... 37 0.013
At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc f... 37 0.013
At3g06760.1 68416.m00801 drought-responsive family protein simil... 36 0.023
At2g04500.1 68415.m00455 DC1 domain-containing protein contains ... 35 0.052
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 34 0.069
At1g56280.1 68414.m06469 drought-responsive family protein conta... 34 0.091
At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identic... 33 0.12
At3g05700.1 68416.m00637 drought-responsive family protein conta... 33 0.12
At1g56280.2 68414.m06470 drought-responsive family protein conta... 33 0.12
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 33 0.21
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 33 0.21
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 33 0.21
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 33 0.21
At1g67220.1 68414.m07651 zinc finger protein-related similar to ... 33 0.21
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 32 0.28
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 31 0.48
At5g40320.1 68418.m04892 DC1 domain-containing protein contains ... 31 0.48
At4g02200.2 68417.m00295 drought-responsive family protein simil... 31 0.85
At4g02200.1 68417.m00294 drought-responsive family protein simil... 31 0.85
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 29 2.6
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 29 2.6
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 29 2.6
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 29 3.4
At5g45275.1 68418.m05557 expressed protein Requires functional a... 28 4.5
At5g02360.1 68418.m00159 DC1 domain-containing protein contains ... 28 6.0
At5g02350.1 68418.m00158 DC1 domain-containing protein contains ... 28 6.0
At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B li... 27 7.9
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 27 7.9
At5g02340.1 68418.m00157 DC1 domain-containing protein contains ... 27 7.9
At3g25080.1 68416.m03133 hypothetical protein contains Pfam prof... 27 7.9
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 48.8 bits (111), Expect = 3e-06
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFDL 339
C+ C K+ R+KC +C+D+DLC C+ G N+H HP + ++ F L
Sbjct: 53 CNYCDKDLSGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYR-VMDNLSFSL 106
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYE---SGATTNQHTTEHPMQCI 315
CD C RR+ C +C D+DLC CYE + HT +HPM I
Sbjct: 2618 CDGCSTVPILRRRWHCTVCPDFDLCEACYEVLDADRLPPPHTRDHPMTAI 2667
>At4g16420.3 68417.m02486 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 486
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHP 303
+CD C K+ R KC +C D+DLC C GA H +HP
Sbjct: 46 NCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHP 89
>At4g16420.2 68417.m02485 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 483
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHP 303
+CD C K+ R KC +C D+DLC C GA H +HP
Sbjct: 46 NCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHP 89
>At4g16420.1 68417.m02484 transcriptional adaptor (ADA2b) identical
to transcriptional adaptor ADA2b [Arabidopsis thaliana]
gi|13591700|gb|AAK31320
Length = 487
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHP 303
+CD C K+ R KC +C D+DLC C GA H +HP
Sbjct: 46 NCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHP 89
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 44.8 bits (101), Expect = 5e-05
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Frame = +1
Query: 154 NRHEXVSCDSCLKNNFRGRRYKCLIC---IDYDLCATCYES-----GATTNQHTTEHPMQ 309
N H CDSC G RY+C C I YDLC CYE+ G QHT +H ++
Sbjct: 304 NVHFGAGCDSCGVYPIIGDRYRCKDCKEEIGYDLCKDCYETPSKVPGRFNQQHTPDHRLE 363
Query: 310 CILSRS 327
L+RS
Sbjct: 364 --LARS 367
>At5g26990.1 68418.m03220 drought-responsive family protein
non-consensus AT donor splice site at exon 3, AC
acceptor splice site at exon 4; similar to
drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 222
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +1
Query: 316 LSRSDFDLYYGGEALTLEQS--QAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVC 489
LSRSD + G E + E + Y CPFC+ F L H+ +H VCP+C
Sbjct: 22 LSRSDN--FLGFEEIEGEDDFREEYACPFCSDY-FDIVSLCCHIDEDHPMDAKNGVCPIC 78
Query: 490 ASMPGGEPNFVTDDFAGHLTLEH 558
A V+ D H+TL+H
Sbjct: 79 AVK-------VSSDMIAHITLQH 94
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein 2
(PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2 GI:12597460
Length = 1691
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATCY-ESGATTNQH-TTEHP 303
+C++C + G+ ++C +C DYD+C C+ G + H T HP
Sbjct: 1517 TCNACHLDIETGQGWRCEVCPDYDVCNACFSRDGGVNHPHKLTNHP 1562
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPM 306
H SC C G R+ C C + +C CYE+ + HP+
Sbjct: 1393 HLQPSCTHCCILMVSGNRWVCSQCKHFQICDKCYEA-EQRREDRERHPV 1440
>At5g49230.1 68418.m06094 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 211
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/79 (31%), Positives = 31/79 (39%)
Frame = +1
Query: 322 RSDFDLYYGGEALTLEQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMP 501
+S DLY G + + CPFC F GL H+ H VCPVC
Sbjct: 23 QSRSDLYLGDVEGEDDLKAEFMCPFCADE-FDIVGLCCHIDVNHPVEAKNGVCPVCTKKV 81
Query: 502 GGEPNFVTDDFAGHLTLEH 558
G D GH+T +H
Sbjct: 82 G-------LDIVGHITTQH 93
>At4g24690.1 68417.m03534 ubiquitin-associated (UBA)/TS-N
domain-containing protein / octicosapeptide/Phox/Bemp1
(PB1) domain-containing protein contains Pfam profiles
PF00627: Ubiquitin-associated (UBA)/TS-N domain,
PF00569: Zinc finger ZZ type domain, PF00564: PB1 domain
Length = 704
Score = 36.7 bits (81), Expect = 0.013
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHT 291
H+ + CD C G R+K + DYDLC CY +T
Sbjct: 286 HKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYSVMGNEGDYT 329
>At1g16710.1 68414.m02003 TAZ zinc finger family protein / zinc finger
(ZZ type) family protein contains Pfam profiles PF02135:
TAZ zinc finger, PF00569: Zinc finger, ZZ type
Length = 1706
Score = 36.7 bits (81), Expect = 0.013
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATCY-ESGATTNQH-TTEHP 303
+C+ C + G ++C +C DYD+C CY + G + H T HP
Sbjct: 1532 TCNVCHLDIESGLGWRCEVCPDYDVCNACYKKEGCINHPHKLTTHP 1577
Score = 33.9 bits (74), Expect = 0.091
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 160 HEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPM 306
H SC C G R+ C C D+ LC CYE+ + HP+
Sbjct: 1408 HLQHSCTHCCTLMVTGNRWVCSQCKDFQLCDGCYEA-EQKREDRERHPV 1455
>At3g06760.1 68416.m00801 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 217
Score = 35.9 bits (79), Expect = 0.023
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +1
Query: 322 RSDFDLYYGGEALTLEQSQ----AYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVC 489
+S DLY GG LE + CPFC F GL H+ EH VCPVC
Sbjct: 23 QSRSDLYLGGGYEDLEGEDDLKAEFICPFCAE-DFDIVGLCCHIDEEHPVEAKNGVCPVC 81
>At2g04500.1 68415.m00455 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 495
Score = 34.7 bits (76), Expect = 0.052
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFD 336
C +C G C++C DY LC TC + +H + SDFD
Sbjct: 334 CKAC--GTKAGYDLNCIVCDDYSLCMTCATLPSKVKHRCDDHLLSLRQGASDFD 385
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) identical
to HAC5 (GI:21105780) [Arabidopsis thaliana]; similar to
CREB-binding protein GB:S39162 from [Homo sapiens]
Length = 1670
Score = 34.3 bits (75), Expect = 0.069
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 169 VSCDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
++C C + + ++C +C DYD+C CY G
Sbjct: 1502 MACAICQQELETAQGWRCEVCPDYDVCNACYSKG 1535
>At1g56280.1 68414.m06469 drought-responsive family protein contains
an AT-AC intron 3, potentially contains a frameshift. An
alternate model provides a translation more consistent
with homologous proteins but lacks the AT-AC intron;
similar to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 200
Score = 33.9 bits (74), Expect = 0.091
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 376 QAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGEPNFVTDDFAGHLTLE 555
+ + CPFC + GL H+ EH + VCPVC+ G + G
Sbjct: 33 EEFACPFCAE-SYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHKRFTMGRKRKS 91
Query: 556 HXTGSRDLISFLDEPXGIRXGGVRRM 633
+G+ +S L + +R G ++R+
Sbjct: 92 RKSGTNSTLSLLRKE--LREGDLQRL 115
>At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 477
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 232 IDYDLCATCYESGATTNQHTTEHPMQCILSRSDFDL 339
+D+DLC C+ G N+H HP + ++ F L
Sbjct: 1 MDFDLCVECFSVGVELNRHKNSHPYR-VMDNLSFSL 35
>At3g05700.1 68416.m00637 drought-responsive family protein contains
similarity to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 181
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +1
Query: 334 DLYYGGEALTLEQS--QAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPG 504
D + G E + E+ + + CPFC+ F L H+ +H VCPVCA G
Sbjct: 26 DTFLGFEEIDGEEEFREEFACPFCSDY-FDIVSLCCHIDEDHPMEAKNGVCPVCAVRVG 83
>At1g56280.2 68414.m06470 drought-responsive family protein contains
an AT-AC intron 3, potentially contains a frameshift. An
alternate model provides a translation more consistent
with homologous proteins but lacks the AT-AC intron;
similar to drought-induced mRNA, Di19 [Arabidopsis
thaliana] gi|469110|emb|CAA55321
Length = 112
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 376 QAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPG 504
+ + CPFC + GL H+ EH + VCPVC+ G
Sbjct: 33 EEFACPFCAE-SYDIIGLCCHIDDEHTLESKNAVCPVCSLKVG 74
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
C+SC + R +RY C D+DLC C+ SG
Sbjct: 310 CNSCSADCSR-KRYHCPKQADFDLCTECFNSG 340
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
C+SC + R +RY C D+DLC C+ SG
Sbjct: 310 CNSCSADCSR-KRYHCPKQADFDLCTECFNSG 340
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
C+SC + R +RY C D+DLC C+ SG
Sbjct: 310 CNSCSADCSR-KRYHCPKQADFDLCTECFNSG 340
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
C+SC + R +RY C D+DLC C+ SG
Sbjct: 310 CNSCSADCSR-KRYHCPKQADFDLCTECFNSG 340
>At1g67220.1 68414.m07651 zinc finger protein-related similar to
SP|Q09472 E1A-associated protein p300 {Homo sapiens},
SP|Q92793 CREB-binding protein {Homo sapiens}; contains
Pfam profiles PF00569: Zinc finger ZZ type, PF00628:
PHD-finger, PF02135: TAZ zinc finger
Length = 1357
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 172 SCDSCLKNNFRGRRYKCLICIDYDLCATCYESG 270
SC C K G R+ C C + LC +CY++G
Sbjct: 1098 SCTRCSKAVLSGLRWFCEKCKNLHLCESCYDAG 1130
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 169 VSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGAT 276
++C +C K+ + CL+C DY C CY T
Sbjct: 1223 LTCTACKKDVSTTIYFPCLLCPDYRACTGCYTKNRT 1258
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from [Homo
sapiens]; contains Pfam PF02135: TAZ zinc finger profile;
contains Pfam PF00569: Zinc finger, ZZ type domain;
identical to histone acetyltransferase HAC4 (GI:14794966)
{Arabidopsis thaliana}
Length = 1456
Score = 32.3 bits (70), Expect = 0.28
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQH 288
C C + + + C +C YD+C+ CY + + H
Sbjct: 1286 CTICQQEVENSQGWHCEVCPGYDVCSACYSKDSINHSH 1323
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 31.5 bits (68), Expect = 0.48
Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Frame = +1
Query: 157 RHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFD 336
R E C+ C KN G Y CL C Y + S + ++HP+ + S S D
Sbjct: 133 RQEKTPCEVC-KNRILGSSYSCLGCELYFHVGCIHLSKEVNHPCHSDHPLMLVESESLTD 191
Query: 337 LYYGGEALTLEQSQA--YTCPFCN 402
L +Q Y C CN
Sbjct: 192 NDKKTCFLCGQQPHGILYHCSICN 215
>At5g40320.1 68418.m04892 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 594
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 NRH-EXVSCDSCLKNNFRGRRYKCLICIDYDLCATC 258
NRH E + C +C++ + Y C+ C D+ L TC
Sbjct: 315 NRHDENIRCRACVRPVYANTFYSCMQCDDFILHETC 350
>At4g02200.2 68417.m00295 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 207
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 367 EQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCA 492
E + Y CPFC+ + L H+ EH +CPVC+
Sbjct: 38 EMAVDYPCPFCSD-DYDLVELCHHIDEEHQLDANNGICPVCS 78
>At4g02200.1 68417.m00294 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 214
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 367 EQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCA 492
E + Y CPFC+ + L H+ EH +CPVC+
Sbjct: 38 EMAVDYPCPFCSD-DYDLVELCHHIDEEHQLDANNGICPVCS 78
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 364 LEQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTTLA 471
LEQ + ++C +C R ++ L H A + TLA
Sbjct: 46 LEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLA 81
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 334 DLYYGGE--ALTLEQSQAYTCPFCNRMGFTDTGLMEHVTAEH 453
D+ Y G +L E+ YTCP CN + T H+++ H
Sbjct: 228 DIEYDGRTHSLPYEKYGPYTCPKCNSVFDTSQKFAAHISSMH 269
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 283 QHTTEHPMQCILSRSDFDLYYGGE--ALTLEQSQAYTCPFCNRMGFTDTGLMEHVTAEHA 456
+ TTE+ + C + D Y G +L ++ YTCP CN + T H+++ +
Sbjct: 135 EKTTEY-IDCEENEKSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAAHMSSHYK 193
Query: 457 DTT 465
T
Sbjct: 194 SET 196
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +1
Query: 388 CPFCNRMGFTDTGLMEHVTAEHADTTLAVVCPVCASMPGGEPNFV--TDDFAGHLTLEH 558
C FC R + D L H++ EH C +C + G+ + DD H +H
Sbjct: 200 CEFCKRPFYGDNELYTHMSREH------YTCHICQRLKPGQYEYYGNYDDLEVHFRSDH 252
>At5g45275.1 68418.m05557 expressed protein Requires functional
assignment.
Length = 570
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 295 EHPMQCILSRSDFDLYY 345
EHP+ +L RSDF LYY
Sbjct: 343 EHPLSFLLCRSDFWLYY 359
>At5g02360.1 68418.m00159 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 342
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/54 (20%), Positives = 23/54 (42%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFD 336
C +C+ + G Y C+ D+ L C + + HP+ + S+++
Sbjct: 222 CQACILPIYEGSYYSCMDECDFILHEACANAPCKKHHALRPHPLTLTVITSEYE 275
>At5g02350.1 68418.m00158 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 651
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +1
Query: 163 EXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPM 306
E + C +C+ + G Y C+ D+ L C + + HP+
Sbjct: 389 ENIICQACILPIYEGNYYSCMDQCDFVLHEACANASRKKDHALHGHPL 436
>At5g59940.1 68418.m07516 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 651
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = +1
Query: 124 FFQRRSLAKMNRHEXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHP 303
F Q+ L N + CD C + Y C C ++ L TC G + EHP
Sbjct: 65 FHQQHPLFLTNGLGDLPCDLCGQKRLEAAGYSCPTC-EFKLDLTC---GINPSPPAIEHP 120
Query: 304 M 306
+
Sbjct: 121 I 121
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +1
Query: 163 EXVSCDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPM 306
E SC++C K C D+DLC +C EHP+
Sbjct: 493 ENHSCNACHKVTVH---MLCCNACDFDLCLSCASLPLKIRHRNDEHPL 537
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +1
Query: 286 HTTEHPMQCILSRSDFDLYYGGEALTLEQSQAYTCPFCNRMGFTDTGLMEHVTAEHADTT 465
H + H + I D E+ T + + ++C +C R ++ L H A + T
Sbjct: 30 HNSSHELNLIDCIDDTTSIVN-ESTTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERT 88
Query: 466 LA 471
LA
Sbjct: 89 LA 90
>At5g02340.1 68418.m00157 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 631
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +1
Query: 175 CDSCLKNNFRGRRYKCLICIDYDLCATCYESGATTNQHTTEHPMQCILSRSDFDLY-YGG 351
C +C+ + G Y C+ D+ L C + + HP+ + +D Y G
Sbjct: 361 CQACILPIYEGTYYSCMDTCDFILHEACANAPRKKHHPLHPHPLTLKVVSIGYDHYRRRG 420
Query: 352 EALTLEQSQAYTCPFC-NRMGFT 417
+ +C F + +GF+
Sbjct: 421 NYFECRACRRQSCGFVYDSLGFS 443
>At3g25080.1 68416.m03133 hypothetical protein contains Pfam profile
PF04776: Protein of unknown function (DUF626)
Length = 237
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 258 ASSAQVVIDANQTFVSSSSKV-IFQTRITADSF 163
A+S + +DA + SSS + FQT +T DSF
Sbjct: 57 AASYYITLDAMEPAADSSSSLQTFQTEVTEDSF 89
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,030,321
Number of Sequences: 28952
Number of extensions: 292644
Number of successful extensions: 817
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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