Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0153
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   6.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.3  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 42  LRECLMDLDLKAYSVIMLDEAHXRTIHTDVL 134
           L E +MD+ L  + +  +  +H   +H D+L
Sbjct: 342 LGENMMDMSLTRHQISSMGHSHAHPMHHDML 372


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 42  LRECLMDLDLKAYSVIMLDEAHXRTIHTDVL 134
           L E +MD+ L  + +  +  +H   +H D+L
Sbjct: 342 LGENMMDMSLTRHQISSMGHSHAHPMHHDML 372


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 285 YTKEPETDYLDASLITVMQIHLRE 356
           Y  +PE D L    I V++ HL E
Sbjct: 137 YIADPEVDSLMVQAIQVLRFHLLE 160


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 604  WWTLASLNRKSTTR 645
            WWT  +  R +TTR
Sbjct: 1051 WWTTTTTRRTTTTR 1064


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 2   PXHCHQIHDGRHAAPR 49
           P H H+ HD R A+ R
Sbjct: 259 PRHFHEEHDTRRASSR 274


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 688 AAAKHRARPGGPHPGRASATGCTXER 765
           A A      GGP  GRA+A G    R
Sbjct: 58  ARASSATTMGGPRYGRAAAQGMPYPR 83



 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 PDLRAGAPRLQEXGDRHQHRG 571
           PD+R G     E   +HQH G
Sbjct: 11  PDMRNGGVVSAEHPHQHQHYG 31


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 509 PDLRAGAPRLQEXGDRHQHRG 571
           PD+R G     E   +HQH G
Sbjct: 11  PDMRNGGVVSAEHPHQHQHYG 31


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 411 CEILYERMKSLGPDVPELII 470
           CE+L E   S+  +VP LII
Sbjct: 424 CELLIEGTTSILINVPSLII 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,577
Number of Sequences: 336
Number of extensions: 3633
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)