Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0153
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.) 260 7e-70
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 250 1e-66
SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 9e-50
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 174 8e-44
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 136 2e-32
SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21) 117 9e-27
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 6e-25
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 90 2e-18
SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22) 79 3e-15
SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26) 77 2e-14
SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09) 74 1e-13
SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96) 68 1e-11
SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_55153| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_20317| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_39573| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_9098| Best HMM Match : Rho_RNA_bind (HMM E-Value=8.9) 30 2.4
SB_12642| Best HMM Match : Pkinase (HMM E-Value=5.3e-07) 30 2.4
SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 29 3.2
SB_2642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_450| Best HMM Match : BCCT (HMM E-Value=5.2e-08) 29 4.2
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 29 4.2
SB_46137| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_22051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 29 5.5
SB_581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_56873| Best HMM Match : K-box (HMM E-Value=0.18) 29 5.5
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 29 5.5
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_48700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 28 7.3
SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 28 9.6
SB_10592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_49454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 260 bits (638), Expect = 7e-70
Identities = 133/257 (51%), Positives = 181/257 (70%), Gaps = 7/257 (2%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPE----- 173
T IKYMTDGMLLRE + D LK YSVI+LDEAH RTIHTDVLFG++K A R +
Sbjct: 149 TRIKYMTDGMLLRESIGDSLLKRYSVIILDEAHERTIHTDVLFGIVKGAQISRKDKGMLP 208
Query: 174 LKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLR 353
LK++V SATL+A +FS+YF A + I GR PVE++Y EP+ DY+ A+LIT+MQ+H
Sbjct: 209 LKIVVMSATLEAHQFSEYFGSAEVLYIEGRQHPVELMYAVEPQVDYMHAALITIMQLHQE 268
Query: 354 EP-PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAP 530
+P GDIL+FLTGQ+EI++ +++ + PD P+L++ P+++ALPS Q ++F PA
Sbjct: 269 KPLGGDILVFLTGQDEIESLSKLVSDCSLHCPPDCPQLLVCPMFAALPSSQQMQVFRPAI 328
Query: 531 PGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPI-XAXGGETSR 707
PG+R V+++TNIAETS+TI G+ YV+D G+VK K ++ KTG+D L V P+ A +
Sbjct: 329 PGARKVILSTNIAETSVTIPGVKYVIDTGYVKAKGFHPKTGLDMLRVQPVSKAQARQRLG 388
Query: 708 PAGRAAPGPGKCYRLYT 758
AGR G CYRLYT
Sbjct: 389 RAGREC--SGVCYRLYT 403
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 250 bits (611), Expect = 1e-66
Identities = 134/200 (67%), Positives = 146/200 (73%), Gaps = 22/200 (11%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T IKYMTDG LLRECL+D +LK YSVIMLDEAH R IHTDVL L ++ L I
Sbjct: 369 TKIKYMTDGFLLRECLIDPELKQYSVIMLDEAHERVIHTDVLLWLDEKGAFAVLALATIE 428
Query: 189 TSA----------------------TLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPE 302
S TL + ++APIFTIPGRTFPVE+LYTKE E
Sbjct: 429 NSKCFGHFCVLMHGTRCPDFPSMWHTLSCSYVYRRGYKAPIFTIPGRTFPVEILYTKEAE 488
Query: 303 TDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 482
+DYLDA+LITVMQIHL EPPGDIL+FLTGQEEIDTACEILYER KSLGPDVPELIILPVY
Sbjct: 489 SDYLDAALITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERTKSLGPDVPELIILPVY 548
Query: 483 SALPSEMQTRIFEPAPPGSR 542
SALPSEMQTRIF+PAPPGSR
Sbjct: 549 SALPSEMQTRIFDPAPPGSR 568
>SB_44906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 194 bits (472), Expect = 9e-50
Identities = 87/135 (64%), Positives = 114/135 (84%)
Frame = +3
Query: 18 KYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIVTSA 197
+YMTDGMLLRE L + DL +YSV+++DEAH RT+HTD+LFGL+K + RP++KLI++SA
Sbjct: 181 QYMTDGMLLREFLGEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPDIKLIISSA 240
Query: 198 TLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILL 377
TLDA KFS +F +APIF IPGR FPV++ YTK PE DYLDA+++TV+QIH+ +P GD+L+
Sbjct: 241 TLDADKFSSFFDDAPIFRIPGRRFPVDIYYTKAPEADYLDATVVTVLQIHITQPDGDVLV 300
Query: 378 FLTGQEEIDTACEIL 422
FLTGQEEI+TA IL
Sbjct: 301 FLTGQEEIETAQVIL 315
Score = 91.1 bits (216), Expect = 9e-19
Identities = 46/72 (63%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
Frame = +3
Query: 546 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSRPAGRAA 725
V++ATNIAETSLTIDGI YV+DPGF KQK YN +TGM+SL VTPI ++ AGRA
Sbjct: 313 VILATNIAETSLTIDGIIYVIDPGFCKQKSYNPRTGMESLVVTPISK--ASANQRAGRAG 370
Query: 726 -PGPGKCYRLYT 758
GKC+RLYT
Sbjct: 371 RVNAGKCFRLYT 382
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 174 bits (423), Expect = 8e-44
Identities = 95/202 (47%), Positives = 127/202 (62%), Gaps = 1/202 (0%)
Frame = +3
Query: 156 VQKRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITV 335
V +R +LKLIVTSAT+DA KF+ +F P + IPGRTFPVE+ +T+ DY+D+++
Sbjct: 700 VSRRRDLKLIVTSATMDAQKFADFFGNVPTYKIPGRTFPVEIFFTRTVMEDYVDSAVKQA 759
Query: 336 MQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRI 515
+QIHL ER+ + + P L +LP+YS LPS++Q +I
Sbjct: 760 LQIHLTPSK---------------------ERLAEV-EEAPPLAVLPIYSQLPSDLQAKI 797
Query: 516 FEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPI-XAXG 692
F+ AP G R V+ATNIAETSLT+DGI +V+D G+ K KVYN K GMD+L V PI A
Sbjct: 798 FQKAPDGVRKCVVATNIAETSLTVDGIMFVIDAGYCKLKVYNPKIGMDALQVYPISQANA 857
Query: 693 GETSRPAGRAAPGPGKCYRLYT 758
+ S AGR GPG+C+RLYT
Sbjct: 858 NQRSGRAGRT--GPGQCFRLYT 877
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 136 bits (328), Expect = 2e-32
Identities = 79/198 (39%), Positives = 115/198 (58%), Gaps = 6/198 (3%)
Frame = +3
Query: 183 IVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPET-----DYLDASLITVMQIH 347
I+TSAT++ F YF +P+ + GRTFPVEV++ + + DY+ ++ V++IH
Sbjct: 844 IITSATINPKLFQDYFGGSPVVEVSGRTFPVEVVWKQGDSSLNSGSDYVSEAIEKVLEIH 903
Query: 348 LREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPA 527
E PGD+L+FLT EID A + ++ L E+I LP++ L E Q ++F+
Sbjct: 904 RTEEPGDVLVFLTCPAEIDRAVTKVCSKVNPL-----EVICLPLHGKLLQEDQQKVFQQF 958
Query: 528 PPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSR 707
P G R VV +TN AETS+TI G+ +VVD G K+ Y K G++ L V+ I + +
Sbjct: 959 P-GKRKVVFSTNCAETSITIPGVKFVVDTGMAKEMKYEEKRGLNILEVSVISRSSADQRK 1017
Query: 708 PAGRAA-PGPGKCYRLYT 758
GRA GKCYRLYT
Sbjct: 1018 --GRAGRTDSGKCYRLYT 1033
>SB_37839| Best HMM Match : HA2 (HMM E-Value=4e-21)
Length = 422
Score = 117 bits (282), Expect = 9e-27
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 7/128 (5%)
Frame = +3
Query: 396 EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG------SRXVVIA 557
EI+ AC+ + + + +LG ++ EL +P+YS LP Q RIFE APP R V+A
Sbjct: 101 EIEEACKRIKKEVDNLGSEIGELKCIPLYSTLPPTQQQRIFEAAPPDRPNGAIGRKCVVA 160
Query: 558 TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSRPAGRAA-PGP 734
TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL V+ I + + AGRA P
Sbjct: 161 TNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVSAISRASAQ--QRAGRAGRTRP 218
Query: 735 GKCYRLYT 758
GKC+RLYT
Sbjct: 219 GKCFRLYT 226
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 111 bits (267), Expect = 6e-25
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 8/146 (5%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRP----EL 176
TVIK+MTDG++L+E D L YSV+++DEAH R+++TD+L GLL + V R +L
Sbjct: 384 TVIKFMTDGVMLKEVEKDFLLSKYSVVVIDEAHERSVYTDILIGLLSRIVPLRAKQGNKL 443
Query: 177 KLIVTSATL---DAVKFSQYFFEAPI-FTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 344
KL++ SATL D ++ F + PI + R FPV V ++K DY+ + V +I
Sbjct: 444 KLVIMSATLRVEDFTSNTKLFPDPPITIKVDSRQFPVTVHFSKRTPDDYIQEAFRKVCKI 503
Query: 345 HLREPPGDILLFLTGQEEIDTACEIL 422
H P G ILLF+TGQ EI C L
Sbjct: 504 HRTLPSGGILLFVTGQNEIHGLCRKL 529
Score = 93.9 bits (223), Expect = 1e-19
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Frame = +3
Query: 462 LIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYN 641
+ +LP+YS L S+ Q ++F+ +P G+R V+ATN+AETSLTI I YVVD G VK++ Y+
Sbjct: 597 MYVLPLYSLLSSKEQAKVFQQSPGGARLCVVATNVAETSLTIPNIKYVVDTGMVKRRYYD 656
Query: 642 SKTGMDSLGVTPIXAXGGETSRPAGRAA-PGPGKCYRLYTGA 764
TG+ S +T ++ AGRA PG CYRLY+ A
Sbjct: 657 KVTGVSSFRIT--WTSKASANQRAGRAGRVEPGHCYRLYSSA 696
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/96 (43%), Positives = 63/96 (65%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T + Y T G+LLR D L S +++DE H RT +D L +L+ + +RP+L++I+
Sbjct: 70 TRLLYCTTGILLRYFESDSTLAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLRVIL 129
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKE 296
SATLD+ FS+YF++AP+ IPGRTFPV Y ++
Sbjct: 130 MSATLDSKLFSEYFYDAPVIHIPGRTFPVHEYYLED 165
>SB_54154| Best HMM Match : HA2 (HMM E-Value=3.5e-22)
Length = 354
Score = 79.4 bits (187), Expect = 3e-15
Identities = 39/94 (41%), Positives = 61/94 (64%)
Frame = +3
Query: 15 IKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIVTS 194
I Y T G+L R + D LK+ S +++DE H R + +D L +++ + +RP+LKL++ S
Sbjct: 67 IIYCTTGVLQRWLVSDPFLKSTSHVIIDEIHERDLMSDFLLIIIRDLLPRRPDLKLVLMS 126
Query: 195 ATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKE 296
ATL+A FS YF + P+ IPG T+PV+ Y +E
Sbjct: 127 ATLNAEIFSTYFGKCPMLHIPGFTYPVKEFYIEE 160
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +3
Query: 501 MQTRIFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKV 635
+ +F+ P G R +VIATNIAETS+TID + +VVD G VK+K+
Sbjct: 197 LNMEVFDRPPLGVRKIVIATNIAETSITIDDVVFVVDCGKVKEKL 241
>SB_38249| Best HMM Match : HA2 (HMM E-Value=1.6e-26)
Length = 355
Score = 77.0 bits (181), Expect = 2e-14
Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Frame = +3
Query: 225 YFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEID 404
Y+ E + + G P+ K E D D +L+ I PG +L+FL G I
Sbjct: 2 YYLE-DVIQMLGFVPPLPEKKKKREENDEDDEALLNY--ISGLGIPGAVLIFLPGWNLIF 58
Query: 405 TACEILYERMKSLGPD--VPELIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIAETS 578
L++ +K + P P +LP++S +P E Q R+FEP P G ++++TNIAETS
Sbjct: 59 A----LHKHLK-MHPQFGTPNYRLLPLHSQIPREDQRRVFEPVPEGVTKIILSTNIAETS 113
Query: 579 LTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSR-PAGRAAPG 731
+TID + +V+D K K++ S M + E R AGR PG
Sbjct: 114 ITIDDVVFVIDSVKAKVKLFTSHNNMTNYATVWASQTNMEQRRGRAGRVRPG 165
>SB_12766| Best HMM Match : Helicase_C (HMM E-Value=5.8e-09)
Length = 185
Score = 73.7 bits (173), Expect = 1e-13
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +3
Query: 390 QEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIA 569
QEE+++A L ER + + L +LP+YS LP E Q +F+ PP +R V++ATN+A
Sbjct: 81 QEEVESAVSKLIERARGMPKGSSYLKVLPMYSGLPYEEQMLVFKRPPPNTRKVIVATNVA 140
Query: 570 ETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSRPAGRAA-PGPGKCY 746
E S+TIDGI Y +SL VT I E + AGRA GK Y
Sbjct: 141 EASITIDGIVY------------------ESLVVTEISQASAE--QRAGRAGRVRAGKAY 180
Query: 747 RLYT 758
RLYT
Sbjct: 181 RLYT 184
Score = 34.7 bits (76), Expect = 0.084
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +3
Query: 159 QKRPELKLIVTSATLDAVKFSQYF 230
+KRP+L++IV+SATLDA F +F
Sbjct: 39 KKRPDLRIIVSSATLDAEMFKDFF 62
>SB_52252| Best HMM Match : DEAD (HMM E-Value=0.96)
Length = 363
Score = 67.7 bits (158), Expect = 1e-11
Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLM-DLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLI 185
T++ Y T+G+LLR + D L + I++DE H R +D L L++ + +KL+
Sbjct: 64 TLLTYCTNGVLLRTLMQGDNSLSFITHIIVDEIHERDRFSDFLLISLRELLSFNKNIKLV 123
Query: 186 VTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKE 296
+ SA LD F +YF + P+ +PGR F V+VL+ ++
Sbjct: 124 LMSAALDIDLFVEYFGKCPVINVPGRCFDVDVLFLED 160
>SB_6014| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 513 IFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPG 617
+F+ AP G R +++TNIAETS+TIDGI ++ D G
Sbjct: 1 VFDVAPDGVRKCIVSTNIAETSITIDGIRFIADSG 35
>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 423 YERMKSLGPDVPELIILPVYS-ALPSEMQTRIFEP-APPGSRXVVIATNIAETS 578
YE +K+L PD+P L + P + A + + +P +PPG V T +A S
Sbjct: 88 YEEVKTLSPDIPALALYPSLNIANKQSLHRTLSDPGSPPGHTQVCQETEVAPAS 141
>SB_55153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = -1
Query: 385 VRNSRISPG-GSLRWICMTVISEASK*SVSGSLVYKTSTGKVRPGMVKIGASKKYCENLT 209
VR ++++ G ++ + M V + ASK ++ + V + + G RP V + ++ ++
Sbjct: 4 VRANKVTMGVARVKRVTMGV-ARASKVTMGVARVKRVTMGVARPNKVTMSVARPNKVTMS 62
Query: 208 ASSVADVTMSLSSGRFCTACFSRPNSTSVWMVR 110
+ VTMS++ T +RPN ++ + R
Sbjct: 63 VARPNKVTMSVARPNKVTMSVARPNKVTISVAR 95
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 8/48 (16%)
Frame = +3
Query: 177 KLIVTSATLDAVKFSQYFFE--------APIFTIPGRTFPVEVLYTKE 296
++++ SATL++ FS+YF AP+F + G FPV+ Y ++
Sbjct: 197 EVVLMSATLESDLFSRYFAMPIRGQLEGAPVFAVEGNIFPVQEYYLED 244
>SB_20317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 8/47 (17%)
Frame = +3
Query: 180 LIVTSATLDAVKFSQYFFE--------APIFTIPGRTFPVEVLYTKE 296
+++ SATL++ FS+YF AP+F + G FPV+ Y ++
Sbjct: 1 VVLMSATLESDLFSRYFAMPIRGQLEGAPVFAVEGNIFPVQEYYLED 47
>SB_39573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/72 (31%), Positives = 29/72 (40%)
Frame = -1
Query: 739 LPGPGAARPAGRDVSPPXAXIGVTPNESIPVFEL*TFCLTKPGSTT*YIPSMVSDVSAML 560
LPG A R AG D + P G ESIP +T S SM + +
Sbjct: 12 LPGTSAYRGAGEDETTPLIPFGPEDGESIP--------MTSTSSRMHAAHSMATRCATQT 63
Query: 559 VAITTFLEPGGA 524
A T+F+ G A
Sbjct: 64 TAETSFITEGAA 75
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 582 TIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGE 698
T G + + P +KQ Y+SK + SLG+T I GE
Sbjct: 966 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 1004
>SB_9098| Best HMM Match : Rho_RNA_bind (HMM E-Value=8.9)
Length = 208
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Frame = -3
Query: 395 FLASEEQQDIPRGLPQVDLHDRDQ*GVQIVRLRFLGVQD----FDGEGSTGDG--EDRGL 234
F+ASE++ P Q R G R RFL ++ DG GDG +D
Sbjct: 58 FIASEDRVVSPSDTAQAKSFSRRTRGQSKERQRFLSIEQCTKVIDGNNDDGDGGYDDYYY 117
Query: 233 EEVLR-ELDGVERGGRDDE 180
++ + DG + GG DD+
Sbjct: 118 DDAAAGDGDGDDDGGGDDD 136
>SB_12642| Best HMM Match : Pkinase (HMM E-Value=5.3e-07)
Length = 253
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 582 TIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGE 698
T G + + P +KQ Y+SK + SLG+T I GE
Sbjct: 32 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 70
>SB_46304| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 645
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 656 GFVGCNSYXXXXXXNIAPGRAGRTRAG 736
GF+GC SY I PG GRT G
Sbjct: 180 GFIGCISYIKVDNNTIRPGYKGRTCEG 206
>SB_2642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -3
Query: 281 DFDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELEFGALLHGLLQQTEQHVGVDG 114
D D G GD +D G++ + DGV+ G DD+ + ++ G + VG DG
Sbjct: 2 DDDDVGGDGDDDDDGVDGDGNDDDGVDDDGDDDDDDDDDVVDG-NDDDDDDVGGDG 56
>SB_450| Best HMM Match : BCCT (HMM E-Value=5.2e-08)
Length = 444
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 424 YNISHAVSISSWPVRNSRISPGGSLRWICMTVIS 323
Y ++ A+ WP+ N++ GS RW+ M ++
Sbjct: 294 YRLAIAIFFPCWPMANAKHKIDGSNRWVTMVFLA 327
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = -1
Query: 538 EPGGAGSKIRVCISDGSAE-YTGRIISSGTSGPKDFILSYNISHAVSISSWPVRNSR-IS 365
+PG + + V +++ + Y + G G KDFI+SYN +++SS V R +S
Sbjct: 28 DPGDNRNSVSVVLANTTQYVYFALHYTGGCIGVKDFIVSYNQCPKMALSSSLVELPRTVS 87
Query: 364 PGGSLRWICMTVISEASK*SVSGSLV-YKTSTGKVRPGM 251
P + + ++ + + L Y S G+ P M
Sbjct: 88 PANGSQKVKGNCVAHSQPLTDESELYGYCQSNGEWSPAM 126
>SB_46137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 9 TVIKYMTDGMLLREC-LMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQK 164
T I Y+TD L+EC L DLD Y I D A + I + + L K V++
Sbjct: 226 THIMYLTDEGKLKECTLEDLDTNTYKFIATD-AQAKNIRHNSMEQLTKADVKE 277
>SB_22051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -3
Query: 449 RPQGLHSLVQYLTRRVNLFLASEEQQDIPRGLPQVDLHDRDQ*GVQIVRLRFLGVQDFDG 270
R Q SL L ++ I R L + D HD D + LR L D DG
Sbjct: 103 RKQNKESLKVIGDHATGLCTGHDDDHLILRALAESDGHDDDH-----LILRALTESDGDG 157
Query: 269 EGSTGDGED 243
+ + GDG+D
Sbjct: 158 DDNKGDGDD 166
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 282 LYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPE 461
L T+ + A+ + Q H + D LTGQ+ D EIL E + PD+ +
Sbjct: 615 LSTRIHDESEAKANFMRSDQFHRQTAAFDRAQDLTGQKSADECMEILKEHISQRSPDIRK 674
Query: 462 LII 470
I
Sbjct: 675 TFI 677
>SB_581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 439 DFILSYNISHAVSISSWPVRNSRI 368
D+ LSY SH +I ++P+RN RI
Sbjct: 178 DWTLSYEGSHRSTICAYPLRNERI 201
>SB_56873| Best HMM Match : K-box (HMM E-Value=0.18)
Length = 214
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = -3
Query: 269 EGSTGDGEDRGLEEVLRELDGVERGGRDDELEFGALLHGLLQQTEQHVGVDGAXVRLVKH 90
+G +G+ ++G+EE+LRE D + R +LE L +Q E+ V + + + +
Sbjct: 96 DGPSGNPNNKGVEELLRENDRLR--ARIQDLERTG-LRARIQDLERAVSKNNSTCDICMY 152
Query: 89 DHRVRLQ 69
R R+Q
Sbjct: 153 GLRARIQ 159
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 568 AMLVAITTFLEPG-GAGSKIRVCISDGSAEYTGRIISSGTSGP-KDFILSYNISH 410
A+LV I+ +P A K+ + DG RI++ GP D SYN ++
Sbjct: 662 ALLVLISYGQDPSQAAADKLNAALHDGDTVTVARIVAGTQQGPLADLEASYNATY 716
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -3
Query: 440 GLHSLVQYLTRRVNLFLASEEQQDIPRGLPQVDLHDRDQ*GVQIVRLR 297
GLH L + L R N+ + +I +G ++ LHD++ +VRL+
Sbjct: 204 GLHKLRESLGRDSNVLMFKRHVANIFKGKVKIILHDKNNLKALLVRLQ 251
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 329 HGHADPPEGAPGGYP 373
H H PP G PGGYP
Sbjct: 611 HPHHPPPTGYPGGYP 625
>SB_55885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 28.3 bits (60), Expect = 7.3
Identities = 24/74 (32%), Positives = 29/74 (39%)
Frame = -1
Query: 739 LPGPGAARPAGRDVSPPXAXIGVTPNESIPVFEL*TFCLTKPGSTT*YIPSMVSDVSAML 560
LPG A R AG D + P ESIP T T SM S +
Sbjct: 12 LPGAFADRGAGDDETTPLIPFDPDDEESIP--------KTSTSLRTHAAHSMASQTAGTA 63
Query: 559 VAITTFLEPGGAGS 518
A+T+F+ G A S
Sbjct: 64 SAVTSFITEGAATS 77
>SB_48700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 603 VVDPGFVKQKVYNSKTGMDSLGVTPIXAXGG 695
V++PG V +K N +GM++L PI GG
Sbjct: 18 VLNPGRVPRKQVNVNSGMNALPFYPIKCQGG 48
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 11 CHQIHDGRHAAPRVPHGPGPEGVLG 85
C Q HDG++ P +P PG G G
Sbjct: 29 CAQGHDGKNGIPGIPGVPGKPGTPG 53
>SB_45775| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 584
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 329 HGHADPPEG---APGGYPAVPHWPRRD*HG 409
HG+ + P G P GYPA PH HG
Sbjct: 432 HGYHEAPHGYHEVPHGYPAAPHGYHEVPHG 461
>SB_10592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 290 GVQDFDGEGST-GDGEDRGLEEVLRELDGVERGGRDDELEFGALLHGLLQQTEQHVGVDG 114
G D DG+ GDG+D G ++V + DG + DD+ + ++ ++ + VDG
Sbjct: 6 GDDDDDGDDDVYGDGDDDGDDDVYGDDDGGDDDDDDDDDDGDEVMVMMMYDIYDNDDVDG 65
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 8 HCHQIHDGRHAAPRVPH 58
H +IH HAAPR PH
Sbjct: 189 HARRIHAHTHAAPRTPH 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,322,638
Number of Sequences: 59808
Number of extensions: 520680
Number of successful extensions: 2125
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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