Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0153
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 426 e-120
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 426 e-120
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 318 3e-87
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 318 3e-87
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 318 3e-87
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 291 4e-79
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 291 4e-79
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 276 1e-74
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 276 1e-74
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 221 6e-58
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 199 2e-51
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 156 2e-38
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 99 4e-21
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical ... 52 6e-07
AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical... 31 0.69
Z83110-3|CAB05525.1| 251|Caenorhabditis elegans Hypothetical pr... 30 2.1
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 29 2.8
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 29 2.8
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 29 2.8
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 29 2.8
AF077545-1|AAC26306.2| 506|Caenorhabditis elegans Hypothetical ... 29 2.8
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 29 3.7
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 29 3.7
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 28 6.4
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 28 6.4
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 28 6.4
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 6.4
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 6.4
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 28 6.4
U23519-5|AAK31502.1| 201|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 28 8.5
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 426 bits (1049), Expect = e-120
Identities = 203/251 (80%), Positives = 225/251 (89%), Gaps = 1/251 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T+IKYMTDGMLLRECL+D DL YS+IMLDEAH RTIHTDVLFGLLK A +KRPELKLI+
Sbjct: 631 TIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLII 690
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGD 368
TSATLD+VKFS+YF EAPIFTIPGRTFPVE+LYT+EPE+DYL+A+ ITVMQIHL EPPGD
Sbjct: 691 TSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGD 750
Query: 369 ILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRXV 548
+L+FLTGQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+PAP G R V
Sbjct: 751 VLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKV 810
Query: 549 VIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPI-XAXGGETSRPAGRAA 725
VIATNIAETSLTIDGI+YVVDPGFVKQK+YN K+GMDSL VTPI A + S AGR
Sbjct: 811 VIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRT- 869
Query: 726 PGPGKCYRLYT 758
GPGKCYRLYT
Sbjct: 870 -GPGKCYRLYT 879
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 426 bits (1049), Expect = e-120
Identities = 203/251 (80%), Positives = 225/251 (89%), Gaps = 1/251 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T+IKYMTDGMLLRECL+D DL YS+IMLDEAH RTIHTDVLFGLLK A +KRPELKLI+
Sbjct: 631 TIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAARKRPELKLII 690
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGD 368
TSATLD+VKFS+YF EAPIFTIPGRTFPVE+LYT+EPE+DYL+A+ ITVMQIHL EPPGD
Sbjct: 691 TSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQIHLTEPPGD 750
Query: 369 ILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRXV 548
+L+FLTGQEEIDT+CE+LYERMKS+GPDVPELIILPVY ALPSEMQTRIF+PAP G R V
Sbjct: 751 VLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKRKV 810
Query: 549 VIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPI-XAXGGETSRPAGRAA 725
VIATNIAETSLTIDGI+YVVDPGFVKQK+YN K+GMDSL VTPI A + S AGR
Sbjct: 811 VIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRT- 869
Query: 726 PGPGKCYRLYT 758
GPGKCYRLYT
Sbjct: 870 -GPGKCYRLYT 879
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 318 bits (781), Expect = 3e-87
Identities = 152/252 (60%), Positives = 198/252 (78%), Gaps = 2/252 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
TV+KYMTDGMLLRE L + DL +YSV+M+DEAH RT+HTD+LFGL+K + R +LKL++
Sbjct: 456 TVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLI 515
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PG 365
+SATLDA KFS +F +APIF IPGR FPV++ YT+ PE DY+DA+++T+MQIHL +P PG
Sbjct: 516 SSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPG 575
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRX 545
DIL+FLTGQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFEP P +R
Sbjct: 576 DILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARK 635
Query: 546 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSRPAGRAA 725
VV+ATNIAETS+TIDGI YV+DPGF KQ +++++G++ L V I ++ AGRA
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK--AAANQRAGRAG 693
Query: 726 -PGPGKCYRLYT 758
GPGKC+RLYT
Sbjct: 694 RTGPGKCFRLYT 705
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 318 bits (781), Expect = 3e-87
Identities = 152/252 (60%), Positives = 198/252 (78%), Gaps = 2/252 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
TV+KYMTDGMLLRE L + DL +YSV+M+DEAH RT+HTD+LFGL+K + R +LKL++
Sbjct: 456 TVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLI 515
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PG 365
+SATLDA KFS +F +APIF IPGR FPV++ YT+ PE DY+DA+++T+MQIHL +P PG
Sbjct: 516 SSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPG 575
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRX 545
DIL+FLTGQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFEP P +R
Sbjct: 576 DILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARK 635
Query: 546 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSRPAGRAA 725
VV+ATNIAETS+TIDGI YV+DPGF KQ +++++G++ L V I ++ AGRA
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK--AAANQRAGRAG 693
Query: 726 -PGPGKCYRLYT 758
GPGKC+RLYT
Sbjct: 694 RTGPGKCFRLYT 705
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 318 bits (781), Expect = 3e-87
Identities = 152/252 (60%), Positives = 198/252 (78%), Gaps = 2/252 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
TV+KYMTDGMLLRE L + DL +YSV+M+DEAH RT+HTD+LFGL+K + R +LKL++
Sbjct: 456 TVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLI 515
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREP-PG 365
+SATLDA KFS +F +APIF IPGR FPV++ YT+ PE DY+DA+++T+MQIHL +P PG
Sbjct: 516 SSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPG 575
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRX 545
DIL+FLTGQEEI+T E L ER K+LG + ELI LPVY+ LPS++Q +IFEP P +R
Sbjct: 576 DILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARK 635
Query: 546 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSRPAGRAA 725
VV+ATNIAETS+TIDGI YV+DPGF KQ +++++G++ L V I ++ AGRA
Sbjct: 636 VVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISK--AAANQRAGRAG 693
Query: 726 -PGPGKCYRLYT 758
GPGKC+RLYT
Sbjct: 694 RTGPGKCFRLYT 705
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 291 bits (714), Expect = 4e-79
Identities = 138/252 (54%), Positives = 186/252 (73%), Gaps = 2/252 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T+IKYMTDG+LLRECL D L YS I++DEAH R+++TDVLFGLL++ + KR +LKLIV
Sbjct: 532 TIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIV 591
Query: 189 TSATLDAVKFSQYFF-EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPG 365
TSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+DA++ + IHL G
Sbjct: 592 TSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDG 651
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRX 545
DIL+F+ GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G R
Sbjct: 652 DILIFMPGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 546 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPI-XAXGGETSRPAGRA 722
++ATNIAETSLT+DGI +V+DPGF K KVYN + GMD+L + P+ A + + AGR
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 723 APGPGKCYRLYT 758
GPG+CYRLYT
Sbjct: 771 --GPGQCYRLYT 780
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 291 bits (714), Expect = 4e-79
Identities = 138/252 (54%), Positives = 186/252 (73%), Gaps = 2/252 (0%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T+IKYMTDG+LLRECL D L YS I++DEAH R+++TDVLFGLL++ + KR +LKLIV
Sbjct: 532 TIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIV 591
Query: 189 TSATLDAVKFSQYFF-EAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPG 365
TSAT+DA KF+ +F P FTIPGRTFPVE+ + + P DY+DA++ + IHL G
Sbjct: 592 TSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDG 651
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRX 545
DIL+F+ GQE+I+ CE++ E++ L + P L +LP+YS LPS++Q +IF+ AP G R
Sbjct: 652 DILIFMPGQEDIECTCEMIKEKLGELD-EAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 546 VVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPI-XAXGGETSRPAGRA 722
++ATNIAETSLT+DGI +V+DPGF K KVYN + GMD+L + P+ A + + AGR
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 723 APGPGKCYRLYT 758
GPG+CYRLYT
Sbjct: 771 --GPGQCYRLYT 780
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 276 bits (676), Expect = 1e-74
Identities = 139/258 (53%), Positives = 182/258 (70%), Gaps = 8/258 (3%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
TV+KY TDGMLLRE + L Y V++LDEAH RT+ TD+L GL+K+ V+ R ++K+++
Sbjct: 175 TVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVI 234
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPG 365
SATLDA KF +YF + P+ ++PGRTFPVE+ +T E DYL+A++ TV+QIH+ E G
Sbjct: 235 MSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEG 294
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG--- 536
DILLFLTGQEEI+ AC+ + +++LG D L +P+YS LP Q RIFEPAPP
Sbjct: 295 DILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPN 354
Query: 537 ---SRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSR 707
SR VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL V PI +
Sbjct: 355 GAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK--ASAMQ 412
Query: 708 PAGRAA-PGPGKCYRLYT 758
AGRA PGKC+RLYT
Sbjct: 413 RAGRAGRTKPGKCFRLYT 430
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 276 bits (676), Expect = 1e-74
Identities = 139/258 (53%), Positives = 182/258 (70%), Gaps = 8/258 (3%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
TV+KY TDGMLLRE + L Y V++LDEAH RT+ TD+L GL+K+ V+ R ++K+++
Sbjct: 175 TVLKYCTDGMLLREAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVI 234
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL-REPPG 365
SATLDA KF +YF + P+ ++PGRTFPVE+ +T E DYL+A++ TV+QIH+ E G
Sbjct: 235 MSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEG 294
Query: 366 DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPG--- 536
DILLFLTGQEEI+ AC+ + +++LG D L +P+YS LP Q RIFEPAPP
Sbjct: 295 DILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPN 354
Query: 537 ---SRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGETSR 707
SR VI+TNIAETSLTIDG+ +V+DPGF KQKVYN + ++SL V PI +
Sbjct: 355 GAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISK--ASAMQ 412
Query: 708 PAGRAA-PGPGKCYRLYT 758
AGRA PGKC+RLYT
Sbjct: 413 RAGRAGRTKPGKCFRLYT 430
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 221 bits (539), Expect = 6e-58
Identities = 120/262 (45%), Positives = 168/262 (64%), Gaps = 11/262 (4%)
Frame = +3
Query: 3 RXTVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKL 182
+ T +K+MTDG+LLRE L D L YS+IM+DEAH R+ +TD+L GLL++ +Q R +L++
Sbjct: 167 KDTKVKFMTDGLLLREILADPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRI 226
Query: 183 IVTSATLDAVKFSQYF----------FEAPIFTIPGRTFPVEVLYTKEPETDYLDASLIT 332
IV+SATLDA F +F A I ++ GRT PV V +TK DY +++ T
Sbjct: 227 IVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDT 286
Query: 333 VMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTR 512
V+ IH E PGDIL+FLTGQ+E++ CE L E +L + L ++P Y ALP+ Q +
Sbjct: 287 VINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNL-KNCDRLWVVPCYGALPAREQMK 345
Query: 513 IFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSL-GVTPIXAX 689
F+ P G+R VV+ATNIAE S+TI GI YV+D G+VK + ++ G+++L VT A
Sbjct: 346 AFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKAS 405
Query: 690 GGETSRPAGRAAPGPGKCYRLY 755
+ + AGR PGKCYRLY
Sbjct: 406 AEQRAGRAGRIR--PGKCYRLY 425
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical protein
T05E8.3 protein.
Length = 856
Score = 199 bits (485), Expect = 2e-51
Identities = 115/262 (43%), Positives = 157/262 (59%), Gaps = 12/262 (4%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPE----L 176
T I+YMTDG++LR+ L+ L YS +++DEAH R++H+DVL +L+Q +R E L
Sbjct: 252 TKIEYMTDGIVLRKALVSPLLDKYSCVIIDEAHERSLHSDVLMCILRQCQDQRRETNNPL 311
Query: 177 KLIVTSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLYTKEP------ETDYLDASLITVM 338
+LI+ SATL A KF YF A + + GRTFP+EV + TDY+ ++I V
Sbjct: 312 RLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVK 371
Query: 339 QIHLREPPG-DILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRI 515
+HL EP G DIL+FLTG EEI+ L E SL L+ +P+Y+AL E Q
Sbjct: 372 YVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKEA 431
Query: 516 FEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGG 695
F P G+R V+I+TNIAETS+TI GI V+D G VK K + + +D L V +
Sbjct: 432 FRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSK--A 489
Query: 696 ETSRPAGRAA-PGPGKCYRLYT 758
+ + AGRA PGKCYRLY+
Sbjct: 490 QAKQRAGRAGRDAPGKCYRLYS 511
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 156 bits (378), Expect = 2e-38
Identities = 96/264 (36%), Positives = 149/264 (56%), Gaps = 14/264 (5%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
T + ++T+G+LLR+ D L+ Y+VI+LDE H R + +D+L GLL+ KR +LKLI+
Sbjct: 180 TKLLFLTEGLLLRQMEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRDDLKLIL 239
Query: 189 TSATLDAVKFSQYFFEAPIFTIPGRTFPVEVLY--------TKEPETDYLDAS-LITVMQ 341
SAT++ F YF AP+ +PGR FP++V + + +T +D + +++
Sbjct: 240 MSATINLDLFKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILE 299
Query: 342 IHLREPP----GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQT 509
+ ++ P GD L+FL G EI ++ E +K+ IIL ++S L E Q
Sbjct: 300 LIDKQFPSTQRGDALIFLNGVAEIS----MVAEHLKNYAELTNGWIILMLHSTLSVEEQD 355
Query: 510 RIFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAX 689
++F+ AP G R +++TN+AETS+TIDGI +V+D G V + TG L T
Sbjct: 356 KVFDQAPVGIRKCILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKL--TEFWVS 413
Query: 690 GGETSRPAGRAA-PGPGKCYRLYT 758
++ GRA GPG CYRLY+
Sbjct: 414 KASANQRKGRAGRTGPGICYRLYS 437
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 98.7 bits (235), Expect = 4e-21
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPE----L 176
T I +MTDG+L++E D+ LK YSVI++DEAH R++++DVL G+L + V R + L
Sbjct: 326 TNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPL 385
Query: 177 KLIVTSATLDAVKFSQY----FFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQI 344
+L++ SATL F+ + + R FPV V + K DY+ ++ +I
Sbjct: 386 RLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRI 445
Query: 345 HLREPPGDILLFLTGQEEI 401
H PPG IL+F+TGQ E+
Sbjct: 446 HETLPPGAILVFVTGQHEV 464
Score = 88.6 bits (210), Expect = 4e-18
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +3
Query: 450 DVPELIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQ 629
D L LP+YS L Q R+F+ P G R VI+TN+AETSLTI G+ YV+D GF K+
Sbjct: 571 DCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKR 630
Query: 630 KVYNSKTGMDSLGVTPIXAXGGETSRPAGRAAP-GPGKCYRLYTGA 764
++Y+S TG+ V I G+ + AGRA G YRLY+ A
Sbjct: 631 RLYDSITGVSRFAVCRISQASGD--QRAGRAGRISAGHAYRLYSSA 674
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 85.0 bits (201), Expect = 5e-17
Identities = 54/162 (33%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Frame = +3
Query: 282 LYTKEPETDYLDASLITVMQIHLREPP--GDILLFLTGQEEIDTACEILYERMKSLGPDV 455
L+ + +D L+ + +L + P G IL+FL G E+I + + + K+ ++
Sbjct: 616 LFYGSSSNNSVDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAI-DCWKNSLKNM 674
Query: 456 PELIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIAETSLTIDGIYYVVDPGFVKQKV 635
+I+LP++S + S IF+ P +R +++ATNIAE S+TI+ + +VVD G VK+K
Sbjct: 675 KNVIVLPLHSQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKS 734
Query: 636 YNSKTGMDSLGVTPI-XAXGGETSRPAGRAAPGPGKCYRLYT 758
++ + + +L V PI + + S AGR A G C RLYT
Sbjct: 735 FDHEAKLSTLTVKPIARSNADQRSGRAGRVA--NGYCIRLYT 774
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Frame = +3
Query: 9 TVIKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIV 188
TV+ Y T G+LLR D + I++DE H R I+TD L L++ ++ RP+LK+I+
Sbjct: 274 TVLTYCTTGVLLRMLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVIL 333
Query: 189 TSATLDA--VKFSQYF--FEAPIFTIPGRTFPVEVLY 287
SAT++ FS YF + I R F V+V Y
Sbjct: 334 MSATIEGNMQLFSNYFENHSMDVIRIESRAFDVKVFY 370
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 73.7 bits (173), Expect = 1e-13
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +3
Query: 363 GDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSR 542
G +L+FL G EI T C L E + + E ILP++S L S+ Q ++F P G R
Sbjct: 660 GAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYE--ILPLHSQLTSQEQRKVFNHYP-GKR 716
Query: 543 XVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGM 656
++++TNIAETS+TID + YV+D K+++Y S M
Sbjct: 717 KIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNM 754
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/100 (32%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Frame = +3
Query: 15 IKYMTDGMLLRECLMDLDLKAYSVIMLDEAHXRTIHTDVLFGLLKQAVQKRPELKLIVTS 194
I + T G+LLR +M+ L+ S +++DE H R + TD + +L++ + +L++++ S
Sbjct: 479 IMFCTVGVLLR--MMENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYRDLRVVLMS 536
Query: 195 ATLDAVKFSQYFFE------APIFTIPGRTFPVEVLYTKE 296
AT+D F+ +F P+ T+ GRTFPV+ Y ++
Sbjct: 537 ATIDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLED 576
>AC084159-1|AAK39368.1| 223|Caenorhabditis elegans Hypothetical
protein Y73B3A.21 protein.
Length = 223
Score = 51.6 bits (118), Expect = 6e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 306 DYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYE 428
DY +++ TV+ IH E PGDIL+FLTGQ+E++ CE L E
Sbjct: 148 DYCQSAVNTVINIHKHENPGDILVFLTGQDEVEDVCEKLRE 188
>AC006708-24|AAF60413.1| 660|Caenorhabditis elegans Hypothetical
protein Y110A7A.19 protein.
Length = 660
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 354 EPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 482
EP + LL + E+ +C ILYERM+S DV E + L ++
Sbjct: 117 EPTENNLLKMISSREVKDSC-ILYERMRSENVDVSEKVQLELF 158
>Z83110-3|CAB05525.1| 251|Caenorhabditis elegans Hypothetical
protein F57C2.3 protein.
Length = 251
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 617 ARVHHVVYTVDGQRRLRDVGGDHHXPGAGGRRLEDPGLHL 498
A+VH VV T++G + LR G PGA R E H+
Sbjct: 31 AQVHSVVETINGAQMLRVWRGRKFGPGASAERRERRLFHV 70
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 558 TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGE 698
T + +T G + + P +KQ Y+ K + SLG+T I GE
Sbjct: 165 TETVKKRITFVGSPFWMAPELIKQSSYDYKADIWSLGITAIELANGE 211
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 558 TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGE 698
T + +T G + + P +KQ Y+ K + SLG+T I GE
Sbjct: 178 TETVKKRITFVGSPFWMAPELIKQSSYDYKADIWSLGITAIELANGE 224
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 558 TNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDSLGVTPIXAXGGE 698
T + +T G + + P +KQ Y+ K + SLG+T I GE
Sbjct: 180 TETVKKRITFVGSPFWMAPELIKQSSYDYKADIWSLGITAIELANGE 226
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -3
Query: 287 VQDFDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELE 174
+QD +G DG D G EE ELD E D+ELE
Sbjct: 102 IQDSEGSEDGSDGSDGGSEE---ELDDDEEELEDEELE 136
>AF077545-1|AAC26306.2| 506|Caenorhabditis elegans Hypothetical
protein H41C03.3 protein.
Length = 506
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 276 EVLYTKEPETDYLDAS-LITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPD 452
+ +Y + PETD++D ++ +++L+ G + + + ++ +C + R+ G D
Sbjct: 95 KAIYPRRPETDHIDCGRILADDKVYLQTVSGKDRVKIVENKNLNMSCSAIMNRILPSGND 154
Query: 453 VPEL 464
+ L
Sbjct: 155 LKPL 158
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 414 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIAETSLT 584
+++YE+MK+L E + PV +ALP R +P V+ + +AE+ LT
Sbjct: 339 QVIYEKMKALVVKALETGV-PVLAALPPMAADRHHIASPAAPESVIPSPIMAESELT 394
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 236 GPDLHHPRSNLPRRSLVHQGTGDGLFGRLTDHGHA-DPPEGAPGGY 370
GPD H+ PR G G G +G + +G++ P G GY
Sbjct: 127 GPDYHYHYHEAPRYGYSRYGDGYGRYGPYSGYGNSYYPSYGGYSGY 172
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 414 EILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRXVVIATNIAETSLT 584
+++YE+MK+L E + PV +ALP R +P V+ + +AE+ LT
Sbjct: 339 QVIYEKMKALVVKALETGV-PVLAALPPMAADRHHIASPAAPESVIPSPIMAESELT 394
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 534 GSRXVVIATNIAETSLTIDGIYYVVD 611
GS+ V+IAT +AE L I G+ +V++
Sbjct: 655 GSKPVLIATAVAERGLDIKGVDHVIN 680
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 534 GSRXVVIATNIAETSLTIDGIYYVVD 611
GS+ V+IAT +AE L I G+ +V++
Sbjct: 866 GSKPVLIATAVAERGLDIKGVDHVIN 891
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 534 GSRXVVIATNIAETSLTIDGIYYVVD 611
GS+ V+IAT +AE L I G+ +V++
Sbjct: 866 GSKPVLIATAVAERGLDIKGVDHVIN 891
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 534 GSRXVVIATNIAETSLTIDGIYYVVD 611
GS+ V+IAT +AE L I G+ +V++
Sbjct: 655 GSKPVLIATAVAERGLDIKGVDHVIN 680
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 534 GSRXVVIATNIAETSLTIDGIYYVVD 611
GS+ V+IAT +AE L I G+ +V++
Sbjct: 655 GSKPVLIATAVAERGLDIKGVDHVIN 680
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 534 GSRXVVIATNIAETSLTIDGIYYVVD 611
GS+ V+IAT +AE L I G+ +V++
Sbjct: 866 GSKPVLIATAVAERGLDIKGVDHVIN 891
>U23519-5|AAK31502.1| 201|Caenorhabditis elegans Hypothetical
protein F26G1.5 protein.
Length = 201
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +2
Query: 353 GAPGGYPAVPHWPR---RD*HGV*DIVRENEVL--GA-GRAGADNSAGVLCAAVRDADPD 514
GAP G+ A P HGV + V++ L G GR A+ V C +++DAD D
Sbjct: 41 GAPAGFGAQPQTQAVAGPAQHGVTNAVQDRIQLIYGVPGRRNANQKLRVCCRSLKDADVD 100
Query: 515 LR 520
R
Sbjct: 101 CR 102
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 278 FDGEGSTGDGEDRGLEEVLRELDGVERGGRDDELEF 171
FD E S DGED +E E +G + DDE F
Sbjct: 721 FDDEASESDGEDEFEDEDEEEPEGEDLEDSDDERLF 756
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,536,659
Number of Sequences: 27780
Number of extensions: 373627
Number of successful extensions: 1505
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -