Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0152
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02150.1 68417.m00287 importin alpha-2 subunit identical to i... 168 3e-42
At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMP... 161 3e-40
At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMP... 161 3e-40
At1g02690.2 68414.m00220 importin alpha-2 subunit, putative simi... 160 1e-39
At1g02690.1 68414.m00219 importin alpha-2 subunit, putative simi... 160 1e-39
At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMP... 157 5e-39
At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMP... 157 5e-39
At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2) sim... 151 6e-37
At5g49310.1 68418.m06102 importin alpha-1 subunit, putative simi... 144 5e-35
At3g05720.1 68416.m00640 importin alpha-1 subunit, putative simi... 124 8e-29
At5g03070.1 68418.m00255 armadillo/beta-catenin repeat family pr... 83 2e-16
At5g52000.1 68418.m06453 importin alpha-1 subunit, putative simi... 76 3e-14
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 41 0.001
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 41 0.001
At2g44900.1 68415.m05589 armadillo/beta-catenin repeat family pr... 39 0.004
At3g60350.1 68416.m06749 armadillo/beta-catenin repeat family pr... 38 0.007
At4g12710.1 68417.m01995 armadillo/beta-catenin repeat family pr... 38 0.009
At5g19820.1 68418.m02355 PBS lyase HEAT-like repeat-containing p... 37 0.016
At4g31890.1 68417.m04532 armadillo/beta-catenin repeat family pr... 37 0.016
At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family pr... 35 0.047
At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family pr... 35 0.047
At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family pr... 34 0.083
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 34 0.11
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 34 0.11
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 33 0.14
At1g27910.1 68414.m03420 U-box domain-containing protein contain... 33 0.14
At1g51350.1 68414.m05775 armadillo/beta-catenin repeat family pr... 33 0.19
At3g49570.1 68416.m05417 expressed protein 31 0.77
At3g44800.1 68416.m04826 meprin and TRAF homology domain-contain... 30 1.4
At3g46510.1 68416.m05049 armadillo/beta-catenin repeat family pr... 30 1.8
At3g31910.1 68416.m04037 hypothetical protein 30 1.8
At3g05760.1 68416.m00647 expressed protein 29 2.4
At5g38400.1 68418.m04642 hypothetical protein 29 3.1
At1g02570.1 68414.m00208 expressed protein 29 3.1
At5g42340.1 68418.m05155 armadillo/beta-catenin repeat family pr... 29 4.1
At1g75370.1 68414.m08754 SEC14 cytosolic factor, putative / phos... 29 4.1
At5g66200.1 68418.m08339 armadillo/beta-catenin repeat family pr... 28 5.5
At5g04640.1 68418.m00470 MADS-box family protein SLM3 MADS-box p... 28 5.5
At4g36860.2 68417.m05227 LIM domain-containing protein low simil... 28 5.5
At3g20490.1 68416.m02595 expressed protein 28 5.5
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 28 5.5
At2g02560.1 68415.m00195 TIP120 protein, putative similar to TBP... 28 5.5
At1g01110.1 68414.m00014 expressed protein contains Prosite PS00... 28 5.5
At3g49580.1 68416.m05418 expressed protein 28 7.2
At2g48120.1 68415.m06024 pale cress protein (PAC) identical to P... 28 7.2
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 7.2
At5g24660.1 68418.m02914 expressed protein 27 9.5
At3g46600.2 68416.m05059 scarecrow transcription factor family p... 27 9.5
At3g46600.1 68416.m05058 scarecrow transcription factor family p... 27 9.5
At3g18290.1 68416.m02326 zinc finger protein-related weak alignm... 27 9.5
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 27 9.5
At2g13320.1 68415.m01468 expressed protein anf genefinder 27 9.5
>At4g02150.1 68417.m00287 importin alpha-2 subunit identical to
importin alpha-2 subunit (Karyopherin alpha-2 subunit)
(KAP alpha) SP:O04294 from [Arabidopsis thaliana]
Length = 531
Score = 168 bits (409), Expect = 3e-42
Identities = 88/177 (49%), Positives = 118/177 (66%), Gaps = 5/177 (2%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRR---NVPISYSTDEEEIDKNLATTDLDELVMN 376
D +E RRRR + VE+RKNKREE LQK+R ++ +T + E D + A D L
Sbjct: 21 DAEEGRRRREDNLVEIRKNKREENLQKKRFTSSMAFGSATGQTEQDLSSANQLKDNLPAM 80
Query: 377 AAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFETA 550
A +E+ +QL A RKLLS ++NPPI+E++ +G++P + + LSR D P LQFE A
Sbjct: 81 VAGIWSEDSNSQLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDDFPKLQFEAA 140
Query: 551 WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
WALTNIASGTS TN ++ +GAVP+F+QLL S E+V + AVWALGN+ GD P RD
Sbjct: 141 WALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQAVWALGNVAGDSPKCRD 197
Score = 42.3 bits (95), Expect = 3e-04
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 392 NPEAQLAAVQQCRKLLS--CDKNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTN 565
N +L+ ++ LS C PP LP+L + + D L + WAL+
Sbjct: 213 NENTKLSMLRNATWTLSNFCRGKPPPAFEQTQPALPVLERLVQSMDEEVLT-DACWALSY 271
Query: 566 IASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNII-GD 703
++ ++ + V+ AG VP +QLL +V A+ +GNI+ GD
Sbjct: 272 LSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRTIGNIVTGD 318
>At1g09270.2 68414.m01036 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 161 bits (392), Expect = 3e-40
Identities = 87/198 (43%), Positives = 126/198 (63%), Gaps = 12/198 (6%)
Frame = +2
Query: 164 QAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTD 319
+A+ R ++K G D DE RRRR + VE+RKNKRE++L K+R +P+ D
Sbjct: 8 RAELRKKIYKT-GVDADEARRRREDNLVEIRKNKREDSLLKKRREGMMLQQQLPLGAGLD 66
Query: 320 EEE----IDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGI 487
+ ++K L + ++ +++P+AQL A Q RKLLS +++PPIDE+I AG+
Sbjct: 67 GPQTAAAVEKRLEGIPM---MVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGV 123
Query: 488 LPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCD 667
+P + L R D+P LQFE AWALTN+ASGTS T V+ GAVP+F++LL S ++V +
Sbjct: 124 IPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVRE 183
Query: 668 XAVWALGNIIGDGPVLRD 721
AVWALGN+ GD P R+
Sbjct: 184 QAVWALGNVAGDSPNCRN 201
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/106 (24%), Positives = 52/106 (49%)
Frame = +2
Query: 389 ENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNI 568
++P + A++ +++ D + +I +G+LP L L++ +++ E W ++NI
Sbjct: 303 QSPTVLIPALRTVGNIVTGDDSQT-QFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNI 361
Query: 569 ASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDG 706
+G Q VV AG + + LL + ++ A WA+ N G
Sbjct: 362 TAGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEAAWAISNATSGG 407
Score = 37.1 bits (82), Expect = 0.012
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Frame = +2
Query: 269 EETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCD 448
E T Q R+ + I S +E+ K + V ++P+ Q A + S
Sbjct: 98 EATTQFRKLLSIERSPPIDEVIK---AGVIPRFVEFLGRHDHPQLQFEAAWALTNVAS-G 153
Query: 449 KNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV-PV 625
+ +I G +PI + L+ A + + + WAL N+A + N V++ GA+ P+
Sbjct: 154 TSDHTRVVIEQGAVPIFVKLLTSASDDVRE-QAVWALGNVAGDSPNCRNLVLNYGALEPL 212
Query: 626 FLQLLMSPHENVCDXAVWALGNIIGDGP 709
QL + ++ A W L N P
Sbjct: 213 LAQLNENSKLSMLRNATWTLSNFCRGKP 240
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 491 PILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDX 670
P+L Q L+ ++ W L+N G + V A+P+ QL+ E V
Sbjct: 211 PLLAQ-LNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKP-ALPILRQLIYLNDEEVLTD 268
Query: 671 AVWALGNIIGDGP 709
A WAL + + DGP
Sbjct: 269 ACWAL-SYLSDGP 280
>At1g09270.1 68414.m01035 importin alpha-1 subunit, putative (IMPA4)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 538
Score = 161 bits (392), Expect = 3e-40
Identities = 87/198 (43%), Positives = 126/198 (63%), Gaps = 12/198 (6%)
Frame = +2
Query: 164 QAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRN--------VPISYSTD 319
+A+ R ++K G D DE RRRR + VE+RKNKRE++L K+R +P+ D
Sbjct: 8 RAELRKKIYKT-GVDADEARRRREDNLVEIRKNKREDSLLKKRREGMMLQQQLPLGAGLD 66
Query: 320 EEE----IDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGI 487
+ ++K L + ++ +++P+AQL A Q RKLLS +++PPIDE+I AG+
Sbjct: 67 GPQTAAAVEKRLEGIPM---MVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIKAGV 123
Query: 488 LPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCD 667
+P + L R D+P LQFE AWALTN+ASGTS T V+ GAVP+F++LL S ++V +
Sbjct: 124 IPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVRE 183
Query: 668 XAVWALGNIIGDGPVLRD 721
AVWALGN+ GD P R+
Sbjct: 184 QAVWALGNVAGDSPNCRN 201
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/106 (24%), Positives = 52/106 (49%)
Frame = +2
Query: 389 ENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNI 568
++P + A++ +++ D + +I +G+LP L L++ +++ E W ++NI
Sbjct: 303 QSPTVLIPALRTVGNIVTGDDSQT-QFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNI 361
Query: 569 ASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDG 706
+G Q VV AG + + LL + ++ A WA+ N G
Sbjct: 362 TAGNKLQIEAVVGAGIILPLVHLLQNAEFDIKKEAAWAISNATSGG 407
Score = 37.1 bits (82), Expect = 0.012
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 1/148 (0%)
Frame = +2
Query: 269 EETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPEAQLAAVQQCRKLLSCD 448
E T Q R+ + I S +E+ K + V ++P+ Q A + S
Sbjct: 98 EATTQFRKLLSIERSPPIDEVIK---AGVIPRFVEFLGRHDHPQLQFEAAWALTNVAS-G 153
Query: 449 KNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV-PV 625
+ +I G +PI + L+ A + + + WAL N+A + N V++ GA+ P+
Sbjct: 154 TSDHTRVVIEQGAVPIFVKLLTSASDDVRE-QAVWALGNVAGDSPNCRNLVLNYGALEPL 212
Query: 626 FLQLLMSPHENVCDXAVWALGNIIGDGP 709
QL + ++ A W L N P
Sbjct: 213 LAQLNENSKLSMLRNATWTLSNFCRGKP 240
Score = 31.9 bits (69), Expect = 0.44
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +2
Query: 491 PILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDX 670
P+L Q L+ ++ W L+N G + V A+P+ QL+ E V
Sbjct: 211 PLLAQ-LNENSKLSMLRNATWTLSNFCRGKPPTPFEQVKP-ALPILRQLIYLNDEEVLTD 268
Query: 671 AVWALGNIIGDGP 709
A WAL + + DGP
Sbjct: 269 ACWAL-SYLSDGP 280
>At1g02690.2 68414.m00220 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 539
Score = 160 bits (388), Expect = 1e-39
Identities = 86/178 (48%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRRNV---PISYSTDEEEIDKNLAT-TDLDELVM 373
D DE RRRR + VE+RKNKREE LQK+R P S ++ +L T T L+ +
Sbjct: 21 DADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQ 80
Query: 374 NAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFET 547
A +E+ + QL A R+LLS ++NPPI+E++ +G++P + Q LSR D LQFE
Sbjct: 81 MIAGVMSEDRDLQLEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEA 140
Query: 548 AWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
AWALTNIASGTS T ++ +GAVP+F++LL S E V + AVWALGN+ GD P RD
Sbjct: 141 AWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCRD 198
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 449 KNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVF 628
K P E LP L + L D L + +WAL+ ++ GT+ + V+ AG +P
Sbjct: 236 KPQPAFEQQTKAALPALERLLHSTDEEVLT-DASWALSYLSDGTNEKIQTVIDAGVIPRL 294
Query: 629 LQLLMSPHENVCDXAVWALGNII-GD 703
+QLL P +V A+ +GNI+ GD
Sbjct: 295 VQLLAHPSPSVLIPALRTIGNIVTGD 320
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 551 WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDG 706
W L+N G + A+P +LL S E V A WAL + + DG
Sbjct: 227 WTLSNFCRGKPQPAFEQQTKAALPALERLLHSTDEEVLTDASWAL-SYLSDG 277
>At1g02690.1 68414.m00219 importin alpha-2 subunit, putative similar
to importin alpha-2 subunit (Karyopherin alpha-2
subunit) (KAP alpha) SP:O04294 from [Arabidopsis
thaliana]
Length = 538
Score = 160 bits (388), Expect = 1e-39
Identities = 86/178 (48%), Positives = 115/178 (64%), Gaps = 6/178 (3%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRRNV---PISYSTDEEEIDKNLAT-TDLDELVM 373
D DE RRRR + VE+RKNKREE LQK+R P S ++ +L T T L+ +
Sbjct: 21 DADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMASQPGQDFSSSLPTETRLENIQQ 80
Query: 374 NAAN--AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFET 547
A +E+ + QL A R+LLS ++NPPI+E++ +G++P + Q LSR D LQFE
Sbjct: 81 MIAGVMSEDRDLQLEATASFRRLLSIERNPPINEVVQSGVVPHIVQFLSRDDFTQLQFEA 140
Query: 548 AWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
AWALTNIASGTS T ++ +GAVP+F++LL S E V + AVWALGN+ GD P RD
Sbjct: 141 AWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEVREQAVWALGNVAGDSPKCRD 198
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 455 PPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQ 634
P ++ AA LP L + L D L + +WAL+ ++ GT+ + V+ AG +P +Q
Sbjct: 239 PAFEQTKAA--LPALERLLHSTDEEVLT-DASWALSYLSDGTNEKIQTVIDAGVIPRLVQ 295
Query: 635 LLMSPHENVCDXAVWALGNII-GD 703
LL P +V A+ +GNI+ GD
Sbjct: 296 LLAHPSPSVLIPALRTIGNIVTGD 319
>At3g06720.2 68416.m00797 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 157 bits (382), Expect = 5e-39
Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 5/177 (2%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY-----STDEEEIDKNLATTDLDELV 370
D +E RRRR + VE+RK+KREE+L K+R + S +DK L + L ++V
Sbjct: 21 DAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDS--LKDMV 78
Query: 371 MNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFETA 550
+ ++P QL + Q RKLLS +++PPI+E+I+AG++P + L + D PA+QFE A
Sbjct: 79 AGVWS-DDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAA 137
Query: 551 WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
WALTNIASGTS T V+ AVP+F+QLL SP ++V + AVWALGN+ GD P RD
Sbjct: 138 WALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRD 194
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Frame = +2
Query: 383 NAENPEAQLAAVQQCRKLLS--C--DKNPPIDELIAAGILPILXQCLSRADNPALQFETA 550
N N A+L+ ++ LS C P D++ A LP L + + D L +
Sbjct: 207 NQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPA--LPALERLIHSDDEEVLT-DAC 263
Query: 551 WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNII-GD 703
WAL+ ++ GT+ + V+ AG VP ++LL+ +V A+ +GNI+ GD
Sbjct: 264 WALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGD 315
>At3g06720.1 68416.m00796 importin alpha-1 subunit, putative (IMPA1)
similar to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 532
Score = 157 bits (382), Expect = 5e-39
Identities = 83/177 (46%), Positives = 116/177 (65%), Gaps = 5/177 (2%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISY-----STDEEEIDKNLATTDLDELV 370
D +E RRRR + VE+RK+KREE+L K+R + S +DK L + L ++V
Sbjct: 21 DAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDS--LKDMV 78
Query: 371 MNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFETA 550
+ ++P QL + Q RKLLS +++PPI+E+I+AG++P + L + D PA+QFE A
Sbjct: 79 AGVWS-DDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAA 137
Query: 551 WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
WALTNIASGTS T V+ AVP+F+QLL SP ++V + AVWALGN+ GD P RD
Sbjct: 138 WALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRD 194
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Frame = +2
Query: 383 NAENPEAQLAAVQQCRKLLS--C--DKNPPIDELIAAGILPILXQCLSRADNPALQFETA 550
N N A+L+ ++ LS C P D++ A LP L + + D L +
Sbjct: 207 NQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPA--LPALERLIHSDDEEVLT-DAC 263
Query: 551 WALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNII-GD 703
WAL+ ++ GT+ + V+ AG VP ++LL+ +V A+ +GNI+ GD
Sbjct: 264 WALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGD 315
>At4g16143.1 68417.m02447 importin alpha-2, putative (IMPA-2)
similar to importin alpha 2 [Capsicum annuum]
GI:13752562; contains Pfam profiles PF01749: Importin
beta binding domain, PF00514:
Armadillo/beta-catenin-like repeat; non-consensus GG
donor splice site at exon 1 and 6; CT acceptor splice
site at exon 2
Length = 444
Score = 151 bits (365), Expect = 6e-37
Identities = 82/179 (45%), Positives = 113/179 (63%), Gaps = 7/179 (3%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEID-----KNLATTDLDEL- 367
D +E RRRR + VE+RK+KREE+LQK+R + + + L L+ L
Sbjct: 21 DAEEGRRRREDNMVEIRKSKREESLQKKRREGLQANQLPQFAPLLFLLHQLLEKKLESLP 80
Query: 368 -VMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFE 544
++ +++ QL A Q RKLLS +++PPI+E+I AG++P + L+R D P LQFE
Sbjct: 81 AMVGGVWSDDRSLQLEATTQFRKLLSIERSPPIEEVIDAGVVPRFVEFLTREDYPQLQFE 140
Query: 545 TAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
AWALTNIASGTS T V+ GAVP+F+QLL S ++V + AVWALGN+ GD P RD
Sbjct: 141 AAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDSPRCRD 199
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +2
Query: 455 PPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQ 634
PP D++ A LP L + + D L + WAL+ ++ GT+ + V+ AG VP ++
Sbjct: 240 PPFDQVRPA--LPALERLIHSTDEEVLT-DACWALSYLSDGTNDKIQSVIEAGVVPRLVE 296
Query: 635 LLMSPHENVCDXAVWALGNII-GD 703
LL +V A+ ++GNI+ GD
Sbjct: 297 LLQHQSPSVLIPALRSIGNIVTGD 320
>At5g49310.1 68418.m06102 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 519
Score = 144 bits (349), Expect = 5e-35
Identities = 77/179 (43%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Frame = +2
Query: 206 DVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAAN 385
D +E RRRR + VE+RK+KR E L K+R V + D L + D E ++ AN
Sbjct: 21 DAEEGRRRREDFLVEIRKSKRNENLMKKRRVKVLPP------DYKLISNDPFESLLEIAN 74
Query: 386 ------AENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFET 547
+++P QL + R +LS D++PP D +I +G++P + L + DNP LQFE
Sbjct: 75 MITGVFSDDPSLQLEYTTRFRVVLSFDRSPPTDNVIKSGVVPRFVEFLKKDDNPKLQFEA 134
Query: 548 AWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRDF 724
AWALTNIASG S T V+ G VP+F+QLL SP ++V + A+W LGN+ GD RDF
Sbjct: 135 AWALTNIASGASEHTKVVIDHGVVPLFVQLLASPDDDVREQAIWGLGNVAGDSIQCRDF 193
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 470 LIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 649
+I G+LP+L L++ ++ E W ++NI +G Q V+ A +P + L
Sbjct: 320 VINCGVLPVLADLLTQNHMRGIRREACWTISNITAGLEEQIQSVIDANLIPSLVNLAQHA 379
Query: 650 HENVCDXAVWALGNI-IGDGP 709
++ A+WA+ N +G P
Sbjct: 380 EFDIKKEAIWAISNASVGGSP 400
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +2
Query: 470 LIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 649
L + +P+L Q + A L+ T W L+N G + +V +PV +L+ S
Sbjct: 195 LNSGAFIPLLHQLNNHATLSILRNAT-WTLSNFFRGKPSPPFDLVKH-VLPVLKRLVYSD 252
Query: 650 HENVCDXAVWALGNI 694
E V A WAL N+
Sbjct: 253 DEQVLIDACWALSNL 267
>At3g05720.1 68416.m00640 importin alpha-1 subunit, putative similar
to importin alpha subunit (Karyopherin alpha subunit)
(KAP alpha) SP:O22478 from [Lycopersicon esculentum]
Length = 528
Score = 124 bits (298), Expect = 8e-29
Identities = 70/168 (41%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Frame = +2
Query: 221 RRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANAENPE 400
RRRR + VE+RK KREE+L K+R + +S + +D+ L ++ ++ +
Sbjct: 24 RRRREDDMVEIRKAKREESLLKKRREALPHSPSADSLDQKL---------ISCIWSDERD 74
Query: 401 AQLAAVQQCRKLLSCDK-NPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASG 577
+ A Q R LL + N ++E+I AG++P + L+ D+P LQFE AWALTNIASG
Sbjct: 75 LLIEATTQIRTLLCGEMFNVRVEEVIQAGLVPRFVEFLTWDDSPQLQFEAAWALTNIASG 134
Query: 578 TSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPVLRD 721
TS T V+ GAV + ++LL SP++ V + VWALGNI GD P RD
Sbjct: 135 TSENTEVVIDHGAVAILVRLLNSPYDVVREQVVWALGNISGDSPRCRD 182
>At5g03070.1 68418.m00255 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 483
Score = 83.0 bits (196), Expect = 2e-16
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Frame = +2
Query: 152 MATD-QAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTD-EE 325
MA D A NR K++ +V RRR+ VTV K +RE ++ +R + + D E+
Sbjct: 1 MADDGSASNRRDPIKSSVGNVAGQRRRKQAVTVA--KERRELLVRAKRLCRVGTNGDVED 58
Query: 326 EIDKNLATTDLDELVMNAANAENPEAQLAAVQ---------------QCRKLLSCDKNPP 460
+ +N D ++ ++ A +++ E +AVQ + R+LLS + PP
Sbjct: 59 ALVENEMMVDEEQPILEAQASKSVEELKSAVQYQGKGAMQKRVTALRELRRLLSKSEFPP 118
Query: 461 IDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFL-QL 637
++ + AG +P+L QCLS E+AW LTNIA+G +T ++ A+P+ + L
Sbjct: 119 VEAALRAGAIPLLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALL--PALPLLIAHL 176
Query: 638 LMSPHENVCDXAVWALGNIIGDGPVLRD 721
V + WA+GN+ G+G LR+
Sbjct: 177 GEKSSAPVAEQCAWAIGNVAGEGEDLRN 204
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 461 IDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAV-PVFLQL 637
ID L + L +L CL R+++ L+ E AW L+NIA+G S + +++H+ V P+ L++
Sbjct: 302 IDRLATSSSLQLLIPCL-RSEHRVLKKEAAWVLSNIAAG-SIEHKRMIHSTEVMPLLLRI 359
Query: 638 LMSPHENVCDXAVWALGNI 694
L + ++ + LGN+
Sbjct: 360 LSTSPFDIRKEVAYVLGNL 378
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/115 (25%), Positives = 51/115 (44%)
Frame = +2
Query: 365 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFE 544
L++ + +P+ QL C ++ K L+ A LP+L L + + +
Sbjct: 130 LLVQCLSFGSPDEQLLESAWCLTNIAAGKPEETKALLPA--LPLLIAHLGEKSSAPVAEQ 187
Query: 545 TAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGP 709
AWA+ N+A N ++ GA+P +++ + A WAL N+I GP
Sbjct: 188 CAWAIGNVAGEGEDLRNVLLSQGALPPLARMIFPDKGSTVRTAAWALSNLI-KGP 241
>At5g52000.1 68418.m06453 importin alpha-1 subunit, putative similar
to importin alpha-1 subunit (Karyopherin alpha-1
subunit, KAP alpha) [Arabidopsis thaliana]
SWISS-PROT:Q96321
Length = 441
Score = 75.8 bits (178), Expect = 3e-14
Identities = 44/124 (35%), Positives = 69/124 (55%)
Frame = +2
Query: 353 DLDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPA 532
++ + +++ +++P QL +V + R++ S I +I +G++P L Q L P
Sbjct: 9 EVSDDIIDGLWSDDPPLQLESVTKIRRITS---QRDISCVIRSGVVPRLVQLLKNQVFPK 65
Query: 533 LQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIGDGPV 712
LQ+E AWALTNIA VV+ AVPV +QL+ SP + V + A+W L N+ G
Sbjct: 66 LQYEVAWALTNIAVDNPGV---VVNNNAVPVLIQLIASPKDYVREQAIWTLSNVAGHSIH 122
Query: 713 LRDF 724
RDF
Sbjct: 123 YRDF 126
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 470 LIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSP 649
+I +G LPI+ L+R ++ W ++NI +GT Q V+ A +P+ + L
Sbjct: 250 VINSGALPIISNMLTRNHENKIKKCACWVISNITAGTKEQIQSVIDANLIPILVNLAQDT 309
Query: 650 HENVCDXAVWALGNIIGDG 706
+ AVWA+ N+ +G
Sbjct: 310 DFYMKKEAVWAISNMALNG 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 461 IDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLL 640
I +I AG +P L Q L + +P + + + +G QT V+++GA+P+ +L
Sbjct: 205 IQSVIEAGFVPKLVQIL-QLPSPVVLVPALLTIGAMTAGNHQQTQCVINSGALPIISNML 263
Query: 641 MSPHEN-VCDXAVWALGNI 694
HEN + A W + NI
Sbjct: 264 TRNHENKIKKCACWVISNI 282
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +2
Query: 488 LPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCD 667
+P+L Q ++ + ++ + W L+N+A + + V+++G + L+LL +
Sbjct: 91 VPVLIQLIA-SPKDYVREQAIWTLSNVAGHSIHYRDFVLNSGVLMPLLRLLYK--DTTLR 147
Query: 668 XAVWALGNIIGDGP 709
A WAL N+ P
Sbjct: 148 IATWALRNLCRGKP 161
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +2
Query: 368 VMNAANAENPEA-QLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFE 544
+++ AE E Q+ A+ Q ++LS + +P+L L+ NP +
Sbjct: 125 ILSGLRAEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDIMLL 184
Query: 545 TAWALTNIASGTSAQTNKVVHAGAVPVFL-QLLMSPHENVCDXAVWALGNIIGDGP 709
A ALT++ + VVH GAV + +LL + ++ + ++ AL I + P
Sbjct: 185 AARALTHLCDVLPSSCAAVVHYGAVSCLVARLLTIEYMDLAEQSLQALKKISQEHP 240
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12
(TRIP12) {Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +2
Query: 368 VMNAANAENPEA-QLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFE 544
+++ AE E Q+ A+ Q ++LS + +P+L L+ NP +
Sbjct: 198 ILSGLRAEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPDIMLL 257
Query: 545 TAWALTNIASGTSAQTNKVVHAGAVPVFL-QLLMSPHENVCDXAVWALGNIIGDGP 709
A ALT++ + VVH GAV + +LL + ++ + ++ AL I + P
Sbjct: 258 AARALTHLCDVLPSSCAAVVHYGAVSCLVARLLTIEYMDLAEQSLQALKKISQEHP 313
>At2g44900.1 68415.m05589 armadillo/beta-catenin repeat family
protein / F-box family protein contains similarity to
F-box protein FBL2 GI:6010699 from [Rattus norvegicus];
contains Pfam profiles PF00514:
Armadillo/beta-catenin-like repeat, PF00646: F-box
domain
Length = 930
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +2
Query: 467 ELIAAGILPILXQCLSRADNPALQFETAWALTNIAS-GTSAQTNKVV--HAGAVPVFLQL 637
E+ AG + L +Q + A AL N+A+ G S N V AGA+ +QL
Sbjct: 559 EVAKAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQL 618
Query: 638 LMSPHENVCDXAVWALGNIIGD 703
SPHE V A AL N+ D
Sbjct: 619 TKSPHEGVRQEAAGALWNLSFD 640
>At3g60350.1 68416.m06749 armadillo/beta-catenin repeat family
protein / F-box family protein contains Pfam profiles
PF00514: Armadillo/beta-catenin-like repeat, PF00646:
F-box domain; similar to F-box protein FBL2 (GI:6010699)
[Rattus norvegicus]
Length = 928
Score = 37.9 bits (84), Expect = 0.007
Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +2
Query: 467 ELIAAGILPILXQCLSRADNPALQFETAWALTNIAS-GTSAQTNKVV--HAGAVPVFLQL 637
E+ AG + L Q + A AL N+A+ G S N V AGA+ +QL
Sbjct: 550 EVARAGGVHALVMLARNCKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQL 609
Query: 638 LMSPHENVCDXAVWALGNIIGD 703
SPHE V A AL N+ D
Sbjct: 610 TQSPHEGVKQEAAGALWNLAFD 631
>At4g12710.1 68417.m01995 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 402
Score = 37.5 bits (83), Expect = 0.009
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 320 EEEIDKNLATTDLDELVMNAANA---ENPEAQLAAVQQCRKLL--SCDKNPPIDELIAAG 484
EEE N T + L+++ + + + ++ A ++ RKLL S K+ +L AG
Sbjct: 31 EEETTTNTWKTTKELLILHLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAG 90
Query: 485 ILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVC 664
++P L L + N + + AL N+A ++V AGAVP +Q+L + ++
Sbjct: 91 VIPPLVPMLF-SSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASLR 149
Query: 665 DXAVWAL 685
+ A A+
Sbjct: 150 ELATAAI 156
>At5g19820.1 68418.m02355 PBS lyase HEAT-like repeat-containing
protein contains Pfam profile: PF03130 PBS lyase
HEAT-like repeat
Length = 1116
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/110 (23%), Positives = 48/110 (43%)
Frame = +2
Query: 365 LVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFE 544
+V++ + +P + AA+ +L S D P + +LP L + NP +Q
Sbjct: 423 MVLSQFQSPHPRVRWAAINAIGQL-STDLGPDLQNQHHERVLPALAAAMDDFQNPRVQAH 481
Query: 545 TAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNI 694
A A+ N + + + G V L LL + + V + A+ AL ++
Sbjct: 482 AASAVLNFSENCTPEILSPYLDGVVSKLLVLLQNGKQMVQEGALTALASV 531
>At4g31890.1 68417.m04532 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 518
Score = 36.7 bits (81), Expect = 0.016
Identities = 26/99 (26%), Positives = 43/99 (43%)
Frame = +2
Query: 404 QLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTS 583
++ A + R L D + L G +P L + + Q + +AL N+ G
Sbjct: 160 KITAASEVRLLAKEDSEARVT-LAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLGIGND 218
Query: 584 AQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNIIG 700
A +V AGAV L+L+ SP+ + A + N +G
Sbjct: 219 ANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLG 257
>At2g05810.2 68415.m00627 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 35.1 bits (77), Expect = 0.047
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 482 GILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 661
G+ ++ C R+ + +Q A A++NIA+ +T + GA+PV +QLL+S +V
Sbjct: 286 GVTVLIEAC--RSGSKQVQEHIAGAISNIAAVEEIRTT-LAEEGAIPVLIQLLISGSSSV 342
Query: 662 CDXAVWALGNIIGDGPVLRD 721
+ + I G RD
Sbjct: 343 QEKTANFISLISSSGEYYRD 362
>At2g05810.1 68415.m00626 armadillo/beta-catenin repeat family
protein weak similarity to CCLS 65 [Silene latifolia]
GI:2570102; contains Pfam profile PF00514:
Armadillo/beta-catenin-like repeat
Length = 580
Score = 35.1 bits (77), Expect = 0.047
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 482 GILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 661
G+ ++ C R+ + +Q A A++NIA+ +T + GA+PV +QLL+S +V
Sbjct: 286 GVTVLIEAC--RSGSKQVQEHIAGAISNIAAVEEIRTT-LAEEGAIPVLIQLLISGSSSV 342
Query: 662 CDXAVWALGNIIGDGPVLRD 721
+ + I G RD
Sbjct: 343 QEKTANFISLISSSGEYYRD 362
>At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family protein
contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 834
Score = 34.3 bits (75), Expect = 0.083
Identities = 25/97 (25%), Positives = 47/97 (48%)
Frame = +2
Query: 356 LDELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRADNPAL 535
+ LV + + +PE + AAV + K++S I L + G + L + L + +
Sbjct: 723 IPSLVEQMSFSSSPETKEAAVLELNKIVSEGVPESIQTLASQGGIEPLVKLLEERNERCV 782
Query: 536 QFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 646
+ + L N+ + T ++ AGAVPV +++MS
Sbjct: 783 EASLS-VLYNLTMDSENHT-AIIRAGAVPVLRRIVMS 817
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +2
Query: 482 GILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 661
G +P L + L +D+ +Q A AL +A N++V A+P + +L S +
Sbjct: 199 GGIPPLVELLEFSDSK-VQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLGSEDAAI 257
Query: 662 CDXAVWALGNIIGDGPVLR 718
AV +GN++ P ++
Sbjct: 258 HYEAVGVIGNLVHSSPHIK 276
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +2
Query: 467 ELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 646
E++ AG L + LS P Q E A L AS S +V GAV +++L S
Sbjct: 278 EVLTAGALQPVIGLLSSCC-PESQREAALLLGQFASTDSDCKVHIVQRGAVRPLIEMLQS 336
Query: 647 PHENVCDXAVWALGNIIGD 703
P + + + +ALG + D
Sbjct: 337 PDVQLKEMSAFALGRLAQD 355
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +2
Query: 482 GILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 661
G +P L + L +D+ +Q A AL +A N++V A+P + +L S +
Sbjct: 198 GGIPPLVELLEFSDSK-VQRAAAGALRTLAFKNDDNKNQIVECNALPTLILMLGSEDAAI 256
Query: 662 CDXAVWALGNIIGDGPVLR 718
AV +GN++ P ++
Sbjct: 257 HYEAVGVIGNLVHSSPHIK 275
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/79 (31%), Positives = 37/79 (46%)
Frame = +2
Query: 467 ELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 646
E++ AG L + LS P Q E A L AS S +V GAV +++L S
Sbjct: 277 EVLTAGALQPVIGLLSSCC-PESQREAALLLGQFASTDSDCKVHIVQRGAVRPLIEMLQS 335
Query: 647 PHENVCDXAVWALGNIIGD 703
P + + + +ALG + D
Sbjct: 336 PDVQLKEMSAFALGRLAQD 354
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +2
Query: 473 IAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPH 652
+ GI P++ L + +Q A AL ++ +++V A+P + +L S
Sbjct: 195 VEGGIAPLVE--LLNFPDVKVQRAAAGALRTVSFRNDENKSQIVELNALPTLVLMLQSQD 252
Query: 653 ENVCDXAVWALGNIIGDGPVLR 718
V A+ A+GN++ P ++
Sbjct: 253 STVHGEAIGAIGNLVHSSPDIK 274
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 467 ELIAAGILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMS 646
E+I AG L + LS Q E A + A+ S + GA+ +++L S
Sbjct: 276 EVIRAGALQPVIGLLSSTCLET-QREAALLIGQFAAPDSDCKVHIAQRGAITPLIKMLES 334
Query: 647 PHENVCDXAVWALGNIIGD 703
E V + + +ALG + D
Sbjct: 335 SDEQVVEMSAFALGRLAQD 353
>At1g27910.1 68414.m03420 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 768
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Frame = +2
Query: 362 ELVMNAANAENPEAQLAAVQQCRKLLSCDKNPPIDELIAAGILPILXQCLSRA---DNPA 532
EL+ + + + V+Q R LL D+ I + G + L Q L A +N +
Sbjct: 425 ELLTTLTDVDTLRKKCRVVEQIRVLLKDDEEARI-LMGENGCVEALLQFLGSALNENNAS 483
Query: 533 LQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVW 679
Q A AL N+A + ++ +G +P+ ++L +PH + A++
Sbjct: 484 AQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIY 532
>At1g51350.1 68414.m05775 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 666
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +2
Query: 485 ILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVH-------AGAVPVFLQLLM 643
IL + + L +A + + + LTN+ASGT V+ AG+ L+ L
Sbjct: 537 ILDTVGRQLRKAPQAQMAIQGMYVLTNVASGTELHKEAVMEQLFPQAKAGSENFMLKFLQ 596
Query: 644 SPHENVCDXAVWALGNII 697
S + AVW + N+I
Sbjct: 597 SDESQLRSAAVWTIINLI 614
>At3g49570.1 68416.m05417 expressed protein
Length = 97
Score = 31.1 bits (67), Expect = 0.77
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 197 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL 367
A ++V+E+RRR E+ E+ + K+E RR V + EE + LA +++ L
Sbjct: 11 AAEEVEELRRRNGELEREMEEMKKEMVQLWRRTVVAEEA--EERLCSQLAELEVESL 65
>At3g44800.1 68416.m04826 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein
Length = 564
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +2
Query: 95 SLFLCVITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREE 274
++ L +I T C+ + Q + + KN+G VD + R+ EVT + K +E
Sbjct: 454 NVLLNLIETMCMSPQNLSIADLGQTEQALTYLKNSGFKVDWLERKLEEVT----EKKIQE 509
Query: 275 TLQKRRNVPISYSTDEEEIDKNLATTDLDELV 370
+ K R + EE D +D + L+
Sbjct: 510 HIGKSRMQGLEEDLKEELKDLKQKCSDTEALL 541
>At3g46510.1 68416.m05049 armadillo/beta-catenin repeat family
protein / U-box domain-containing family protein
contains Pfam domain, PF00514:
Armadillo/beta-catenin-like repeats and Pfam, PF04564:
U-box domain
Length = 660
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 524 NPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENVCDXAVWALGNI 694
NP Q A + +A + + AGA+P+ + LL +P + + +V AL N+
Sbjct: 365 NPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNL 421
>At3g31910.1 68416.m04037 hypothetical protein
Length = 399
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +2
Query: 203 KDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAA 382
K V + ++E + +K+ +E L+KR + + S EE++K+L ++ E +AA
Sbjct: 311 KKVTDFIEEKDEEISKKKKDTLKEDLEKRSVLDVQLSNRIEEVEKDL--KEMKESKPDAA 368
Query: 383 NAENPE 400
+ N E
Sbjct: 369 TSRNDE 374
>At3g05760.1 68416.m00647 expressed protein
Length = 202
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 203 KDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLA 346
+D+DE R++ E EL++ +RE+ +K++ + +E E+D +A
Sbjct: 144 QDLDERIRKQQEEEEELKRQRREKKKEKKKGKVVE---EEPEMDPEVA 188
>At5g38400.1 68418.m04642 hypothetical protein
Length = 151
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = +2
Query: 149 KMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEE 328
K A AK RM+V+K + K + +R+++ + + L + K+E+T + NV + EE+
Sbjct: 35 KHARMTAKARMNVYKESMKPLPP-KRKKSLMIISLMR-KKEDTQDDQNNVTVVEKEKEEK 92
>At1g02570.1 68414.m00208 expressed protein
Length = 431
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -3
Query: 653 HEVTSRAEGIQVLHRHGLLCLFVQTFRKLCLLKPKRSRTVTLDCQPSK 510
H ++ + E VLH H +C V + C KR+ + T+ P K
Sbjct: 237 HSLSGKPE-CSVLHSHLYICWIVLFIAQACAFGIKRTMSTTMSINPDK 283
>At5g42340.1 68418.m05155 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein low similarity
to immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200, GI:14582198;
contains Pfam profiles PF04564: U-box domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 656
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 599 VVHAGAVPVFLQLLMSPHENVCDXAVWALGNI 694
+ +AGA+P+ +QLL P + + AV L N+
Sbjct: 413 IANAGAIPLLVQLLSYPDSGIQENAVTTLLNL 444
>At1g75370.1 68414.m08754 SEC14 cytosolic factor, putative /
phosphatidylinositol transfer-like protein, putative
similar to phosphatidylinositol transfer-like protein
III (GI:14486705) [Lotus japonicus]; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminu
Length = 612
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = +2
Query: 137 ASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYST 316
+S DK + K +G +V+EM + V ELR K + R ISY T
Sbjct: 370 SSCDKPSFSGIKASDTSTAESGSEVEEMASPK--VNRELRVPKLTPVCEDIRGTAISYPT 427
Query: 317 DEEEIDKNLATTDLD 361
D E D + +D
Sbjct: 428 DSSEYDSPMVDKVVD 442
>At5g66200.1 68418.m08339 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 651
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/80 (25%), Positives = 33/80 (41%)
Frame = +2
Query: 482 GILPILXQCLSRADNPALQFETAWALTNIASGTSAQTNKVVHAGAVPVFLQLLMSPHENV 661
G++P+L L + P Q A AL + ++H GA VF ++L V
Sbjct: 190 GVVPLLK--LLKEGKPEGQENAARAL-GLLGRDPESVEHMIHGGACSVFGKVLKEGPMKV 246
Query: 662 CDXAVWALGNIIGDGPVLRD 721
WA ++ + P +D
Sbjct: 247 QAVVAWATSELVSNHPKCQD 266
>At5g04640.1 68418.m00470 MADS-box family protein SLM3 MADS-box
protein, S.latifolia, EMBL:SLSLM3
Length = 322
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 161 DQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKN 340
++ ++ M KD+ +++ +R+ +K T QK+ P S S + + +KN
Sbjct: 103 EELRDAMDSMSKMLKDLKDLQNQRDCEEDVKKKGVLHGTHQKQTFNPESCSVNFDGFNKN 162
Query: 341 LATTDLDELVMNAANAE 391
DLDE+ + AE
Sbjct: 163 TEEFDLDEIFDYVSTAE 179
>At4g36860.2 68417.m05227 LIM domain-containing protein low
similarity to LIM-domain protein [Branchiostoma
floridae] GI:3360516, DRAL/Slim3/FHL2 [Homo sapiens]
GI:7209525; contains Pfam profile PF00412: LIM domain
Length = 547
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +2
Query: 113 ITTYCVETASTDKMATDQAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 292
I Y ET D D+ + M A ++ E RR E K + E L++
Sbjct: 71 IIEYKSETEEDDDDDEDEDEEYMRAQLEAAEE--EERRVAQAQIEEEEKRRAEAQLEETE 128
Query: 293 NVPISYSTDEEEIDKNLATTDLDELVMNA 379
+ +EEE+ ++ A + DEL+ A
Sbjct: 129 KLLAKARLEEEEMRRSKAQLEEDELLAKA 157
>At3g20490.1 68416.m02595 expressed protein
Length = 458
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -2
Query: 411 ANCASGFSALAAFITSSSRSVVARFLSISSSS 316
A+ ASG S++A+ SSRS + RF + S S
Sbjct: 149 ASAASGISSVASLFQMSSRSPLRRFQLLDSDS 180
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = -1
Query: 472 ELINRRVFITREQFSALLHSSQLCFRVFCVGSVHHQLIKVGG---SEVLVDLLLIGRIAN 302
+L+ + FI +F LL + + VFC ++HH I G + +++I + N
Sbjct: 497 QLMKQNAFIYVFKFVQLLLVALITMTVFCRTTMHHNTIDDGNIYLGSLYFSMVII--LFN 554
Query: 301 GHI-TPFLKCFLSFVFS*LDCDFIPSPAH 218
G P L L ++ D F PS A+
Sbjct: 555 GFTEVPMLVAKLPVLYKHRDLHFYPSWAY 583
>At2g02560.1 68415.m00195 TIP120 protein, putative similar to
TBP-interacting protein TIP120 GI:1799570 from [Rattus
norvegicus]
Length = 1219
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 605 HAGAVPVFLQLLMSPHENVCDXAVWALGNI 694
HAG + ++ SP E + A +ALGNI
Sbjct: 851 HAGIETIVIESFQSPFEEIKSAASYALGNI 880
>At1g01110.1 68414.m00014 expressed protein contains Prosite
PS00165: Serine/threonine dehydratases
pyridoxal-phosphate attachment site
Length = 364
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 498 RMGSIPAAMSSSIGGFLSHESSFLHCCTAAN 406
R S + S GG L +S++ CCT +N
Sbjct: 317 RSPSFKSVAGSHFGGMLEQQSNYSSCCTESN 347
>At3g49580.1 68416.m05418 expressed protein
Length = 94
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 197 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL 367
A +++DE+RRR E++ E+ + K E +R V + EE++ LA +++ L
Sbjct: 11 AAEEMDELRRRNIELSREVAEMKTEMIKLWQRTVVAEEA--EEQLCSQLAELEVESL 65
>At2g48120.1 68415.m06024 pale cress protein (PAC) identical to PAC
[Arabidopsis thaliana] gi|1483213|emb|CAA65334
Length = 313
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 212 DEMRRRRNEVTVELRKNKREETLQKRRNV 298
DE + R+ E T ELR+ +REE ++ R +
Sbjct: 61 DEWQARQREKTKELRRMQREEEEEEERKI 89
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 164 QAKNRMHVFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNL 343
Q K R V + ++ E +RR E + KREE + KRR + EE+++ +
Sbjct: 538 QRKEREEVERKR-REEQERKRREEEARKREEERKREEEMAKRREQE-RQRKEREEVERKI 595
>At5g24660.1 68418.m02914 expressed protein
Length = 94
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 197 AGKDVDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDEL 367
A +VDE+RR+ E+ + + K+ E LQ R ++ EE + LA + + L
Sbjct: 11 AASEVDELRRKNGEMEKAVEEMKK-EMLQLWRRTQVAEEA-EERLCSQLAELEAESL 65
>At3g46600.2 68416.m05059 scarecrow transcription factor family
protein scarecrow-like 11 - Arabidopsis thaliana,
EMBL:AF036307
Length = 453
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +2
Query: 209 VDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 388
VDE+ + EV + +KN + E +K+ + S++ + K+ D+ L+M A A
Sbjct: 31 VDELAEKFEEVLLVCQKNDQGEATEKKTR-HVKGSSNRYKQQKSDQPVDMRNLLMQCAQA 89
Query: 389 ENPEAQLAAVQQCRKL 436
Q A ++ +++
Sbjct: 90 VASFDQRRAFEKLKEI 105
>At3g46600.1 68416.m05058 scarecrow transcription factor family
protein scarecrow-like 11 - Arabidopsis thaliana,
EMBL:AF036307
Length = 583
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +2
Query: 209 VDEMRRRRNEVTVELRKNKREETLQKRRNVPISYSTDEEEIDKNLATTDLDELVMNAANA 388
VDE+ + EV + +KN + E +K+ + S++ + K+ D+ L+M A A
Sbjct: 161 VDELAEKFEEVLLVCQKNDQGEATEKKTR-HVKGSSNRYKQQKSDQPVDMRNLLMQCAQA 219
Query: 389 ENPEAQLAAVQQCRKL 436
Q A ++ +++
Sbjct: 220 VASFDQRRAFEKLKEI 235
>At3g18290.1 68416.m02326 zinc finger protein-related weak alignment
to Pfam profiles: PF00097 Zinc finger, C3HC4 type (RING
finger) (2 copies)
Length = 1254
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 185 VFKNAGKDVDEMRRRRNEVTVELRKNKREETLQKRR 292
+FK KD+ R +NE+ E+RK ++ TL RR
Sbjct: 923 LFKPGWKDI--FRMNQNELEAEIRKVYQDSTLDPRR 956
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 472 HSCWNTPHPXSVPFEG*QSSVTVRDRLGFNKHSFRNVCTNKQSSPCRCSTCIPSA 636
H+C P P +PF G SS T R + + + T+ SS R S + SA
Sbjct: 135 HTC---PGPRKLPFMGFLSSSTTRKEAKTTRPNKAHPSTSSSSSSSRWSNLLSSA 186
>At2g13320.1 68415.m01468 expressed protein anf genefinder
Length = 129
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 143 TDKMATDQAKNRMHVF---KNAGKDVDEMRRRRNEVTVELRKNKRE 271
TD++A + + + K G++ +E RRRRN++ E R+ +R+
Sbjct: 85 TDRLAAEAGEEELRRLLENKRRGREEEE-RRRRNQIEEEERRRRRK 129
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,609,716
Number of Sequences: 28952
Number of extensions: 331180
Number of successful extensions: 1143
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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