Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0150
(775 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 237 2e-61
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 231 1e-59
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 226 5e-58
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 171 1e-41
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 166 6e-40
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 159 9e-38
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 136 8e-31
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 134 3e-30
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 130 5e-29
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 118 2e-25
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 113 6e-24
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 112 1e-23
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 89 9e-17
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 87 3e-16
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 83 6e-15
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 48 2e-04
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 45 0.002
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 44 0.004
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 44 0.004
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 44 0.004
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 41 0.030
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 39 0.12
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 38 0.28
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 36 0.85
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 36 1.1
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 36 1.5
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 35 2.0
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 34 4.5
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 34 4.5
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 237 bits (581), Expect = 2e-61
Identities = 123/223 (55%), Positives = 141/223 (63%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G A K FEV+D+HKL FY KRMGAE AD LGDEWKG V ++AGGNDKQ
Sbjct: 1 MKLNVSFPATG-AQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLTN+RVRLL+ GHSCYRPR G KR S GC VD NLS L L++V KG
Sbjct: 60 GFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD V RRLGPKRAS R L+NL KE+D LP +G KPR APK
Sbjct: 120 DIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDG---KKPRTKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKK 674
I RL+TPV LQ +EAEY K+L R++
Sbjct: 177 IQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRR 219
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 231 bits (566), Expect = 1e-59
Identities = 128/225 (56%), Positives = 140/225 (62%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KL EV DE KL FY KRM E AD LG+EWKG V+R++GGNDKQ
Sbjct: 1 MKLNISFPATG-CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ RVRLL+S GHSCYRPR G KR S GC VDANLSVL LVIV KG
Sbjct: 60 GFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD VPRRLGPKRAS+ R LFNL KE+D L EG KPR APK
Sbjct: 120 DIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEG---KKPRTKAPK 175
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RLVTP LQ AEYAKLLA R K++
Sbjct: 176 IQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEA 220
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 226 bits (552), Expect = 5e-58
Identities = 118/225 (52%), Positives = 135/225 (60%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KL E+ DE K+ FY KRM E + LGDEWKG V R+ GGNDKQ
Sbjct: 1 MKLNISYPVTG-CQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK G++TN RVRLL+S GHSCYRPR G KR S GC VD+ LSVL LVIV KG
Sbjct: 60 GFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQ 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD +PRRLGPKR K R +FNL KE+D LP EG K + APK
Sbjct: 120 DIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEG---KKAKSKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RLVTPV LQ A+YAKLLA R K++
Sbjct: 177 IQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLAKRAKEA 221
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 171 bits (417), Expect = 1e-41
Identities = 91/179 (50%), Positives = 108/179 (60%)
Frame = +3
Query: 42 AXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNS 221
A K E+ D+ K IF+ KRMG AD LG+E+KG VL++ GGNDKQG PM+ GVL
Sbjct: 12 AQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQGFPMRQGVLFKG 71
Query: 222 RVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPR 401
RVR+LM GH YRPR DG KR S GC V ++ VL L +V KGA EI GLTD NVPR
Sbjct: 72 RVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 131
Query: 402 RLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVTPVXLQ 578
RLGPKR +K R LF K+ D + + K R APKI RLVT L+
Sbjct: 132 RLGPKRLTKLRRLFG-FKKADGVAIVQKNLIRRTWTTKDGKKRQKAPKIQRLVTESRLR 189
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 166 bits (403), Expect = 6e-40
Identities = 90/211 (42%), Positives = 113/211 (53%)
Frame = +3
Query: 42 AXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNS 221
A K E+ D+ K IF K+MG E D LGDE+KG V ++AGGNDK G PMK GV+
Sbjct: 12 AQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDGFPMKQGVMVRG 71
Query: 222 RVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPR 401
RVRLL+S GHSC+ R G KR S GC V ++ VL L IV KG EI GLT +PR
Sbjct: 72 RVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPR 131
Query: 402 RLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVTPVXLQX 581
+LGPKRA+ + LF L KE+D + K R PKI RL+TP +
Sbjct: 132 KLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFK-TAKGKDRTKCPKIQRLITPERILR 190
Query: 582 XXXXXXXXXXXXXXXXSSEAEYAKLLAXRKK 674
+++ EY K L+ KK
Sbjct: 191 KKVYKAEKTQRYVKTNAAKEEYEKFLSEWKK 221
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 159 bits (385), Expect = 9e-38
Identities = 86/172 (50%), Positives = 101/172 (58%)
Frame = +3
Query: 48 KLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRV 227
K E+ DE KL F KR+G D +G+E+ G V R+ GGNDKQG PM GVLTN+RV
Sbjct: 55 KSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPMMQGVLTNNRV 114
Query: 228 RLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPRRL 407
RLL G CYRPR G +R S GC V +LS L L +V KG EIPGLTD V ++L
Sbjct: 115 RLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKL 174
Query: 408 GPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVT 563
GPKRA+K R LFNL K +D + N K R PKI RLVT
Sbjct: 175 GPKRATKIRKLFNLDKTDDVRKYVIGRAI-----SKNGKNRFIKPKIQRLVT 221
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 136 bits (328), Expect = 8e-31
Identities = 66/148 (44%), Positives = 88/148 (59%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
M++ P NG + ++ D L Y KR+G + + LG ++KG + R+ GG DKQ
Sbjct: 1 MRITLAYPENG-TQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GV+T R+RLL+ G SCYRPR DG KR + GC + +S L V++ KG
Sbjct: 60 GFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNL 449
EI GLT VPRR GPKRAS R +F +
Sbjct: 120 EIDGLTTTAVPRRFGPKRASTLRAMFGI 147
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 134 bits (323), Expect = 3e-30
Identities = 75/153 (49%), Positives = 92/153 (60%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ R+RLL HSC+ PR + K + V+AN+S L LV++ K
Sbjct: 60 GFPMKQGVLTHGRLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS 118
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKEND 464
P RLGP R+S ++ L +E+D
Sbjct: 119 ----------PCRLGPVRSSNISKIYYLCEEDD 141
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 130 bits (313), Expect = 5e-29
Identities = 65/152 (42%), Positives = 91/152 (59%)
Frame = +3
Query: 9 KVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQG 188
K+ P G K F+ +E F KR+G E A LGDE+KG +L++ GG DK G
Sbjct: 1 KINVAYPATGRIKK-FDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDG 59
Query: 189 XPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXE 368
PM GV TN+RVRLL+ + CY+P +G +R + G V ++SVL ++V KG E
Sbjct: 60 FPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGE 119
Query: 369 IPGLTDGNVPRRLGPKRASKXRXLFNLIKEND 464
I G+T+ +P R GP+RAS R LFNL +++D
Sbjct: 120 IEGVTNDALPMRAGPQRASHFRKLFNLSQKDD 151
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 118 bits (284), Expect = 2e-25
Identities = 62/136 (45%), Positives = 76/136 (55%)
Frame = +3
Query: 42 AXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNS 221
A K + D K + RM +E LG+E+ G R+ GGND QG PM GVL +
Sbjct: 18 ANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVLKSQ 77
Query: 222 RVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPR 401
R RLL+ G CY R +G KR S GC V +L L +V+V G +PGLTD VP+
Sbjct: 78 RARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPK 137
Query: 402 RLGPKRASKXRXLFNL 449
RL PKRASK R LF L
Sbjct: 138 RLVPKRASKIRRLFGL 153
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 113 bits (271), Expect = 6e-24
Identities = 70/140 (50%), Positives = 77/140 (55%)
Frame = +3
Query: 159 RVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLX 338
R GGNDKQG VL RVR+LM GH YRPR DG KR S GC V ++ VL
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 339 LVIVXKGAXEIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXN 518
L +V KGA EI GLTD NVPRRLGPKR +K R LF K + P G
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADRVISSEEHG--PQRYG--- 170
Query: 519 AKPRHNAPKIXRLVTPVXLQ 578
K R APKI RLVT L+
Sbjct: 171 -KKRQKAPKIQRLVTESRLR 189
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 112 bits (269), Expect = 1e-23
Identities = 75/226 (33%), Positives = 105/226 (46%), Gaps = 3/226 (1%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXI-FYXKRMGAEXXADXLGDEWKGXVLRVAGGNDK 182
MK+ P NG K FE+ DE + R+G E G E+KG + R+ GG+DK
Sbjct: 1 MKLNIAYPRNG-TVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDK 59
Query: 183 QGXPMKXGVLTNSRVRLLMSXGHSCYRP--RXDGXXKRXSXXGCXVDANLSVLXLVIVXK 356
G PM GVL +SRV LL+ G + G +R + GC + ++++++ + I
Sbjct: 60 DGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKV 119
Query: 357 GAXEIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHN 536
G I G+TD PRRLGPKRASK R LFNL + D + K R
Sbjct: 120 GDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRVV----KSGKKDRLK 175
Query: 537 APKIXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKK 674
APKI RL+TP + EY +L+A ++
Sbjct: 176 APKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRR 221
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 89.4 bits (212), Expect = 9e-17
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Frame = +3
Query: 51 LFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVR 230
+FE+ +++ + Y K++G + LG+E++G ++ + GG+D QG PM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 231 LLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPRRLG 410
L+S G + YR R G +R S G V + VL L+I+ G EI GLT+
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHL 119
Query: 411 PKRASKXRXLFNLIKENDXXXXXXXXXLPA--XEGXXNAKPRHNAPKIXR 554
P++ K R +F + E L + + K RHN ++ R
Sbjct: 120 PRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRHNGKRMKR 169
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 87.4 bits (207), Expect = 3e-16
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Frame = +3
Query: 57 EVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVRLL 236
E+ DE KL I Y K++ ++ +G EW + + GG DKQG PMK G+L+ SRV++L
Sbjct: 17 EIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPSRVKIL 76
Query: 237 MSXGHSCYR--PRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPRRLG 410
+ G + R G R S GC V +SVL + ++ ++ +T+ N + L
Sbjct: 77 LKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLT 135
Query: 411 PKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVTPVXLQ 578
KR+S R + L K +D AK N KI RL+TP+ +Q
Sbjct: 136 HKRSSNLRKVLCLTKTDDIRKHYIKI----------AKDFKNKVKIQRLITPIKIQ 181
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 83.4 bits (197), Expect = 6e-15
Identities = 40/78 (51%), Positives = 50/78 (64%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KL E DE K FY K M +E AD LG+EWKG ++R++GGNDKQ
Sbjct: 1 MKLNISFPATG-CQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLM 239
G PMK VLT+ R+ LL+
Sbjct: 60 GFPMKQDVLTHDRIHLLL 77
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKEND 464
+IPGLTD PR +GPKRAS+ R LFNL KE+D
Sbjct: 81 DIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDD 113
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWK 146
MK+ P G KL EV DE KL FY KRM E AD LG+EWK
Sbjct: 1 MKLNISFPATG-CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 44.8 bits (101), Expect = 0.002
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +3
Query: 30 GNGYAXKLFEV-VDEHKLXIFYXKRMGAEXXADXLGDEW-KGXVLRVAGGNDKQGXPMKX 203
G + K F++ ++ F KR+G A LG E KG L + GG+D+ G PM+
Sbjct: 127 GEVFRTKAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRP 186
Query: 204 GVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIV 350
+ + R L+S G + PR G +R + G + ++ + IV
Sbjct: 187 DIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISEDIVQINTKIV 234
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +3
Query: 156 LRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVL 335
L++ GG DK G PM+ V RV++L+S G +RPR G ++ + G + N+ +
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQV 119
Query: 336 XLVIV 350
+ IV
Sbjct: 120 NMKIV 124
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/87 (29%), Positives = 45/87 (51%)
Frame = +3
Query: 99 RMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDG 278
++G E LG KG LR+ GG+DK G PMK V R + L++ G + ++P G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGG-TGFKPTKKG 86
Query: 279 XXKRXSXXGCXVDANLSVLXLVIVXKG 359
+R + G + ++S + + + +G
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSERG 113
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/68 (32%), Positives = 36/68 (52%)
Frame = +3
Query: 156 LRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVL 335
L++ GG D+ G PM+ + +R RLL+S G +RP+ G KR G + ++ +
Sbjct: 50 LKITGGTDRDGFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQI 108
Query: 336 XLVIVXKG 359
V+V G
Sbjct: 109 NTVVVKHG 116
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 41.1 bits (92), Expect = 0.030
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +3
Query: 222 RVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPR 401
R+RLL HSC+ PR + K + V+AN+S L LV++ K P
Sbjct: 19 RLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 402 RLGPKRASKXRXLFNLIKEND 464
RLGP R+S ++ L +E+D
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD 88
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 39.1 bits (87), Expect = 0.12
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +3
Query: 123 DXLGDEWKGXV-LRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSX 299
+ G E+ V L + GG DK G PM+ + RVR+L+S G +RP+ G ++ +
Sbjct: 49 ELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTV 107
Query: 300 XGCXVDANLSVLXLVIV 350
G + + + + +V
Sbjct: 108 RGNTISPEIVQVNVKLV 124
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 37.9 bits (84), Expect = 0.28
Identities = 27/106 (25%), Positives = 46/106 (43%)
Frame = +3
Query: 63 VDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMS 242
VD F + +GA +G + G + + GG+D G PM+ V + + +L+
Sbjct: 21 VDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDLMEVLLE 78
Query: 243 XGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGL 380
G + + P DG KR + G V ++ L + I G + L
Sbjct: 79 GG-AGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGEEPVAEL 123
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 36.3 bits (80), Expect = 0.85
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +3
Query: 156 LRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVL 335
L++ GG+D G PM+ V+ ++ ++L+S G + P +G +R + G + + +
Sbjct: 150 LKITGGSDNSGFPMRFDVIGAAKRKILLS-GPPGFYPNENGERRRKTIRGNTISQEIVQI 208
Query: 336 XLVIV 350
+IV
Sbjct: 209 NTIIV 213
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 35.9 bits (79), Expect = 1.1
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 1/119 (0%)
Frame = +3
Query: 51 LFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVR 230
L EV + KL FY K M E + +E N + MK VL + RV
Sbjct: 15 LTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSMKQEVLIHFRVH 63
Query: 231 LLMSXGHS-CYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPRR 404
LL++ HS Y+P S V +S+L +VI+ G +IPG T P+R
Sbjct: 64 LLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQTKRWAPKR 121
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 35.5 bits (78), Expect = 1.5
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +3
Query: 102 MGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMSXG 248
+G+E A LG E K +R+ GG+DK G PM+ V +R +L+S G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRG 84
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 35.1 bits (77), Expect = 2.0
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 147 GXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXG 305
G ++ GG D G PM GV + R ++L++ G + PR G +R S G
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRG 206
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 33.9 bits (74), Expect = 4.5
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Frame = -3
Query: 464 IIFFDKVEQXXXXXXXXXXXTAGYISISQSRNFXGTLXHNNKXQDREI-GVNXTSTX*XT 288
+IFF + E+ + I ++R+ L N++ Q + G + T+ +
Sbjct: 100 VIFFGQSEELTNLARTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATTARLAS 159
Query: 287 -FXLSIXARSVT*VAX*HQKTNXAVCQDAXFHRXSLLVVAASDTKYXALPFI 135
F L+ + A H++ + V Q A H +LLVV D + +LPF+
Sbjct: 160 AFTLASAVAAEAARALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 33.9 bits (74), Expect = 4.5
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 147 GXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANL 326
G L + GG+D G PM + + R+L+S G + PR G +R + G + ++
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRGNTITHDI 204
Query: 327 SVLXLVIV 350
+ VIV
Sbjct: 205 VQINTVIV 212
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,745,118
Number of Sequences: 1657284
Number of extensions: 6592751
Number of successful extensions: 10965
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10947
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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