Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0150
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 245 5e-65
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 245 5e-65
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 245 5e-65
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 245 5e-65
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 245 5e-65
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 244 1e-64
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 211 9e-55
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 211 9e-55
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 134 2e-31
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 134 2e-31
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 43 4e-04
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 43 4e-04
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 41 0.002
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 41 0.002
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 245 bits (600), Expect = 5e-65
Identities = 127/225 (56%), Positives = 144/225 (64%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ RVRLL+ GHSCYRPR G KR S GC VDAN+SVL LV++ KG
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD +PRRLGPKRASK R L+NL KE+D LPA + N K APK
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKD---NKKATSKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RL+TPV LQ + A+YAKLL RKK+S
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKES 221
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 245 bits (600), Expect = 5e-65
Identities = 127/225 (56%), Positives = 144/225 (64%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ RVRLL+ GHSCYRPR G KR S GC VDAN+SVL LV++ KG
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD +PRRLGPKRASK R L+NL KE+D LPA + N K APK
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKD---NKKATSKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RL+TPV LQ + A+YAKLL RKK+S
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKES 221
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 245 bits (600), Expect = 5e-65
Identities = 127/225 (56%), Positives = 144/225 (64%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ RVRLL+ GHSCYRPR G KR S GC VDAN+SVL LV++ KG
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD +PRRLGPKRASK R L+NL KE+D LPA + N K APK
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKD---NKKATSKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RL+TPV LQ + A+YAKLL RKK+S
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKES 221
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 245 bits (600), Expect = 5e-65
Identities = 127/225 (56%), Positives = 144/225 (64%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ RVRLL+ GHSCYRPR G KR S GC VDAN+SVL LV++ KG
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD +PRRLGPKRASK R L+NL KE+D LPA + N K APK
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKD---NKKATSKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RL+TPV LQ + A+YAKLL RKK+S
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKES 221
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 245 bits (600), Expect = 5e-65
Identities = 127/225 (56%), Positives = 144/225 (64%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ RVRLL+ GHSCYRPR G KR S GC VDAN+SVL LV++ KG
Sbjct: 60 GFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPK 545
+IPGLTD +PRRLGPKRASK R L+NL KE+D LPA + N K APK
Sbjct: 120 DIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKD---NKKATSKAPK 176
Query: 546 IXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
I RL+TPV LQ + A+YAKLL RKK+S
Sbjct: 177 IQRLITPVVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKES 221
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 244 bits (596), Expect = 1e-64
Identities = 125/218 (57%), Positives = 141/218 (64%)
Frame = +3
Query: 27 PGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXG 206
P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQG PMK G
Sbjct: 11 PATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQG 69
Query: 207 VLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTD 386
VLT+ RVRLL+ GHSCYRPR G KR S GC VDAN+SVL LV++ KG +IPGLTD
Sbjct: 70 VLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTD 129
Query: 387 GNVPRRLGPKRASKXRXLFNLIKENDXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVTP 566
+PRRLGPKRASK R L+NL KE+D LPA + N K APKI RL+TP
Sbjct: 130 TTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRRPLPAKD---NKKATSKAPKIQRLITP 186
Query: 567 VXLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAXRKKDS 680
V LQ + A+YAKLL RKK+S
Sbjct: 187 VVLQRKHRRIALKKKRQIASKEASADYAKLLVQRKKES 224
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 211 bits (515), Expect = 9e-55
Identities = 108/193 (55%), Positives = 123/193 (63%)
Frame = +3
Query: 102 MGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGX 281
MG AD LGDEWKG LR+AGGNDKQG PMK GVLT+ RVRLL+ GHSCYRPR G
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 282 XKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPRRLGPKRASKXRXLFNLIKEN 461
KR S GC VDAN+SVL LV++ KG +IPGLTD +PRRLGPKRASK R L+NL KE+
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 462 DXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEA 641
D LPA + N K APKI RL+TPV LQ + A
Sbjct: 121 DVRRFVVRRPLPAKD---NKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 642 EYAKLLAXRKKDS 680
+YAKLL RKK+S
Sbjct: 178 DYAKLLVQRKKES 190
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 211 bits (515), Expect = 9e-55
Identities = 108/193 (55%), Positives = 123/193 (63%)
Frame = +3
Query: 102 MGAEXXADXLGDEWKGXVLRVAGGNDKQGXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGX 281
MG AD LGDEWKG LR+AGGNDKQG PMK GVLT+ RVRLL+ GHSCYRPR G
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 282 XKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPRRLGPKRASKXRXLFNLIKEN 461
KR S GC VDAN+SVL LV++ KG +IPGLTD +PRRLGPKRASK R L+NL KE+
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 462 DXXXXXXXXXLPAXEGXXNAKPRHNAPKIXRLVTPVXLQXXXXXXXXXXXXXXXXXSSEA 641
D LPA + N K APKI RL+TPV LQ + A
Sbjct: 121 DVRRFVVRRPLPAKD---NKKATSKAPKIQRLITPVVLQRKHRRIALKKKRQIASKEASA 177
Query: 642 EYAKLLAXRKKDS 680
+YAKLL RKK+S
Sbjct: 178 DYAKLLVQRKKES 190
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 134 bits (323), Expect = 2e-31
Identities = 75/153 (49%), Positives = 92/153 (60%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ R+RLL HSC+ PR + K + V+AN+S L LV++ K
Sbjct: 60 GFPMKQGVLTHGRLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS 118
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKEND 464
P RLGP R+S ++ L +E+D
Sbjct: 119 ----------PCRLGPVRSSNISKIYYLCEEDD 141
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 134 bits (323), Expect = 2e-31
Identities = 75/153 (49%), Positives = 92/153 (60%)
Frame = +3
Query: 6 MKVXRFVPGNGYAXKLFEVVDEHKLXIFYXKRMGAEXXADXLGDEWKGXVLRVAGGNDKQ 185
MK+ P G KLFEVVDEHKL +FY KRMG AD LGDEWKG LR+AGGNDKQ
Sbjct: 1 MKLNVSYPATG-CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQ 59
Query: 186 GXPMKXGVLTNSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAX 365
G PMK GVLT+ R+RLL HSC+ PR + K + V+AN+S L LV++ K
Sbjct: 60 GFPMKQGVLTHGRLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS 118
Query: 366 EIPGLTDGNVPRRLGPKRASKXRXLFNLIKEND 464
P RLGP R+S ++ L +E+D
Sbjct: 119 ----------PCRLGPVRSSNISKIYYLCEEDD 141
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 43.2 bits (97), Expect = 4e-04
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +3
Query: 216 NSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNV 395
N R+RLL HSC+ PR + K + V+AN+S L LV++ K
Sbjct: 5 NRRLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 396 PRRLGPKRASKXRXLFNLIKEND 464
P RLGP R+S ++ L +E+D
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD 76
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 43.2 bits (97), Expect = 4e-04
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +3
Query: 216 NSRVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNV 395
N R+RLL HSC+ PR + K + V+AN+S L LV++ K
Sbjct: 5 NRRLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 396 PRRLGPKRASKXRXLFNLIKEND 464
P RLGP R+S ++ L +E+D
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD 76
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +3
Query: 222 RVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPR 401
R+RLL HSC+ PR + K + V+AN+S L LV++ K P
Sbjct: 21 RLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 402 RLGPKRASKXRXLFNLIKEND 464
RLGP R+S ++ L +E+D
Sbjct: 70 RLGPVRSSNISKIYYLCEEDD 90
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 41.1 bits (92), Expect = 0.002
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +3
Query: 222 RVRLLMSXGHSCYRPRXDGXXKRXSXXGCXVDANLSVLXLVIVXKGAXEIPGLTDGNVPR 401
R+RLL HSC+ PR + K + V+AN+S L LV++ K P
Sbjct: 19 RLRLLKKI-HSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 402 RLGPKRASKXRXLFNLIKEND 464
RLGP R+S ++ L +E+D
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD 88
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,123,629
Number of Sequences: 53049
Number of extensions: 320870
Number of successful extensions: 563
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -