Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0149
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.6  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   8.3  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 329 HKRKSVFNEGKEF*AELTLGKIAKNMVIS 243
           H+   ++NE  EF  E  LG    +MVIS
Sbjct: 326 HEVTEIYNENGEFTYENILGMKYLDMVIS 354


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/20 (25%), Positives = 13/20 (65%)
 Frame = +1

Query: 466 YFICWRYWNRICLFLXLNND 525
           +F+CW  +  +C++  L+ +
Sbjct: 284 FFVCWTPYYVMCIWYWLDRE 303


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 5/20 (25%), Positives = 13/20 (65%)
 Frame = +1

Query: 466 YFICWRYWNRICLFLXLNND 525
           +F+CW  +  +C++  L+ +
Sbjct: 284 FFVCWTPYYVMCIWYWLDRE 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,304
Number of Sequences: 336
Number of extensions: 3424
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)