Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0149
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.4  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.4  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.5  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   7.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   7.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   7.3  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   9.6  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -3

Query: 263 AKNMVISVIGWLWSLQSGSTNKTKPYANLNTVVTIQFDSPQCFK 132
           A  + I     LW L SG  N T+P  +   ++T    + Q  K
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQPMCS-PKLLTFDLTTSQLLK 166


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -3

Query: 263 AKNMVISVIGWLWSLQSGSTNKTKPYANLNTVVTIQFDSPQCFK 132
           A  + I     LW L SG  N T+P  +   ++T    + Q  K
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQPMCS-PKLLTFDLTTSQLLK 166


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = -3

Query: 263 AKNMVISVIGWLWSLQSGSTNKTKPYANLNTVVTIQFDSPQCFK 132
           A  + I     LW L SG  N T+P  +   ++T    + Q  K
Sbjct: 124 ASKLAIDKCDRLWVLDSGLVNNTQPMCS-PKLLTFDLTTSQLLK 166


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 1   HQGS-TPKXIDSSKLVHTDFSEEACKFTSSSVITEHGKTLRLK 126
           H+ S +P+  + S +VH++ S  A   TSS    E   T  L+
Sbjct: 731 HRDSLSPRVENRSAIVHSEASANANSSTSSEESREEKATTSLE 773


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 230 LWSLQSGSTNKTKP 189
           LW L SG  N T+P
Sbjct: 140 LWVLDSGLVNNTQP 153


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -3

Query: 158 QFDSPQCFKYLFSLNVXPCSVITLELVNLQASSEKSVCT-SFEESIXFGV 12
           +F  P+C  +LF L+    S   +     +  + K+ C  SF  +I + V
Sbjct: 112 EFMGPKCAAFLFQLSFATTSTTIVSGAMAERCNFKAYCLFSFLNTIVYCV 161


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -3

Query: 263 AKNMVISVIGWLWSLQSGSTNKTKP 189
           A  + I     LW L SG  N T+P
Sbjct: 128 AYKIAIDKFDRLWILDSGIINNTQP 152


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 230 LWSLQSGSTNKTKP 189
           LW L SG  N+T P
Sbjct: 136 LWVLDSGLVNRTVP 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,143
Number of Sequences: 438
Number of extensions: 4042
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)