BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0148
(337 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022215-1|AAY54631.1| 420|Drosophila melanogaster IP12392p pro... 27 8.0
AE014297-3775|AAN14047.1| 420|Drosophila melanogaster CG31436-P... 27 8.0
>BT022215-1|AAY54631.1| 420|Drosophila melanogaster IP12392p
protein.
Length = 420
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 19 LLRDSNMKPFYINYF*LIYTNIITIQPNNRWRQQRDLHNNY 141
+L D + + F L+Y+ + ++P +RW DL N Y
Sbjct: 287 MLLDFQISNLFPLTFDLLYSIYMLLEPEHRWNNWDDLINYY 327
>AE014297-3775|AAN14047.1| 420|Drosophila melanogaster CG31436-PA
protein.
Length = 420
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 19 LLRDSNMKPFYINYF*LIYTNIITIQPNNRWRQQRDLHNNY 141
+L D + + F L+Y+ + ++P +RW DL N Y
Sbjct: 287 MLLDFQISNLFPLTFDLLYSIYMLLEPEHRWNNWDDLINYY 327
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,483,001
Number of Sequences: 53049
Number of extensions: 102959
Number of successful extensions: 163
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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