Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0146
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    25   0.54 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    25   0.54 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    25   0.71 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    25   0.71 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   6.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   6.6  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 289 GTSLQPTPQLISVPIALPGVKPGDPQPTVQ 378
           GT L P+P +    ++ PG   G+  P +Q
Sbjct: 82  GTQLMPSPTVSGSEMSSPGAGSGNLSPQIQ 111


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 289 GTSLQPTPQLISVPIALPGVKPGDPQPTVQ 378
           GT L P+P +    ++ PG   G+  P +Q
Sbjct: 82  GTQLMPSPTVSGSEMSSPGAGSGNLSPQIQ 111


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 270 CPVAGRRHQFAAHSSTHLRAYSVAR 344
           CPV  RR   ++  +TH+R +S  R
Sbjct: 52  CPVCDRRFSQSSSVTTHMRTHSGER 76


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 270 CPVAGRRHQFAAHSSTHLRAYSVAR 344
           CPV  RR   ++  +TH+R +S  R
Sbjct: 308 CPVCDRRFSQSSSVTTHMRTHSGER 332


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 381  TGAQSESTTNSATTEISYANTHTGITEWAPS 473
            T   ++STT+ +TT      + T   EW P+
Sbjct: 1342 TAKPAQSTTSVSTTTSWNPGSTTNYPEWQPT 1372


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 350 NLVIRNQRCKYRCSIRIYYKLSN 418
           NL++  Q C Y   +R+ Y+L N
Sbjct: 191 NLLMELQYCHYLNILRVRYQLLN 213


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 350 NLVIRNQRCKYRCSIRIYYKLSN 418
           NL++  Q C Y   +R+ Y+L N
Sbjct: 191 NLLMELQYCHYLNILRVRYQLLN 213


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,938
Number of Sequences: 336
Number of extensions: 3912
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)