Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0146
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    28   0.39 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    28   0.39 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.68 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   2.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   2.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   6.4  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   6.4  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   8.4  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 27.9 bits (59), Expect = 0.39
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 366 TNGANTGAQSESTTNSATTEISYANTHTGITEWAPSINRSLTRSAS 503
           ++  N  A SES   S  +EI+  NTH   +  + S+N S   S+S
Sbjct: 487 SSSGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSS 532


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 27.9 bits (59), Expect = 0.39
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 366 TNGANTGAQSESTTNSATTEISYANTHTGITEWAPSINRSLTRSAS 503
           ++  N  A SES   S  +EI+  NTH   +  + S+N S   S+S
Sbjct: 488 SSSGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSS 533


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.1 bits (57), Expect = 0.68
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 512 GCITCRSGERAVNTWSPFCNPCMGIC 435
           GC  C   ER     +P C+P  G+C
Sbjct: 440 GCQPCNCDERGSLDNTPSCDPVTGVC 465


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 280 LDGGTSLQPTPQLISVPIALPGVKPGDP 363
           LDGG +L    QL++ PI L  ++  DP
Sbjct: 615 LDGGFTLPFYKQLLNKPITLSDIEDVDP 642


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 436 QIPIQGLQNGLQVLTALSPDLQVIQPSQTRTHDSEHNQP 552
           Q P Q L +  Q    LSP LQ  Q  Q ++   +  QP
Sbjct: 377 QQPRQSLPHRKQTQLQLSPRLQQQQQQQQQSQQQQQQQP 415


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +3

Query: 360 SATNGANTGAQSESTTNSATTEISYANTHTGITEWAPSINRSLTRSASYTA 512
           SAT  +   ++S++   S T E + A + +   +  PS+ +SL  +AS  A
Sbjct: 346 SATRMSRGRSRSQTKRYSQTVESTNAPSRSPGPDEEPSVYKSLAEAASKMA 396


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +3

Query: 468 PSINRSLTRSASYTAFTNSN 527
           P +NRS++++   ++FT+SN
Sbjct: 295 PMLNRSMSQTPKSSSFTDSN 314


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 612 FIRTIYNNLLVRCYEYL 562
           F   IYNNLL  C  YL
Sbjct: 15  FELVIYNNLLYACRSYL 31


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,822
Number of Sequences: 2352
Number of extensions: 16477
Number of successful extensions: 114
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)