Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0145
         (726 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O97428 Cluster: CG4944-PA, isoform A; n=9; Neoptera|Rep...    52   1e-05
UniRef50_Q86G66 Cluster: Putative beta thymosin; n=1; Dermacento...    41   0.036
UniRef50_Q7PRR8 Cluster: ENSANGP00000012542; n=4; Endopterygota|...    41   0.036
UniRef50_O17389 Cluster: Tetra thymosin (Four thymosin repeat pr...    36   1.0  

>UniRef50_O97428 Cluster: CG4944-PA, isoform A; n=9; Neoptera|Rep:
           CG4944-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 129

 Score = 52.4 bits (120), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 44/90 (48%)
 Frame = +2

Query: 89  LPKVATVPEESARRLXDHAVXXTSTPMMKIXLPSAENXATENTQXSLFDGIEKFDSSQLK 268
           LPKVA   +          +   ST   KI LP+AE+ A E TQ S+F+GI  F+ + LK
Sbjct: 11  LPKVAENLKSQLEGFNQDKLKNAST-QEKIILPTAEDVAAEKTQQSIFEGITAFNQNNLK 69

Query: 269 HTETPRRTRFRSKTLSMRRTKRTGSLNGXE 358
           HTET  +     K    +  ++   + G E
Sbjct: 70  HTETNEKNPLPDKEAIEQEKEKNQFIAGIE 99



 Score = 34.3 bits (75), Expect = 3.1
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 173 KIXLPSAENXATENTQXSLFDGIEKFDSSQLKHTETPRRTRFRSK 307
           K  LP  E    E  +     GIE FD+ +LKHTET  +    +K
Sbjct: 76  KNPLPDKEAIEQEKEKNQFIAGIENFDAKKLKHTETNEKNVLPTK 120


>UniRef50_Q86G66 Cluster: Putative beta thymosin; n=1; Dermacentor
           variabilis|Rep: Putative beta thymosin - Dermacentor
           variabilis (American dog tick)
          Length = 122

 Score = 40.7 bits (91), Expect = 0.036
 Identities = 20/66 (30%), Positives = 34/66 (51%)
 Frame = +2

Query: 92  PKVATVPEESARRLXDHAVXXTSTPMMKIXLPSAENXATENTQXSLFDGIEKFDSSQLKH 271
           PKVA   ++        ++  T T   K+ LPS E+   E    SL +G+E+F+ + +KH
Sbjct: 5   PKVADEIQQELASFNAASLKHTET-QEKVLLPSKEDVQQEKIHNSLLEGVEQFEKTSMKH 63

Query: 272 TETPRR 289
            +T  +
Sbjct: 64  AQTQEK 69



 Score = 38.7 bits (86), Expect = 0.14
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 173 KIXLPSAENXATENTQXSLFDGIEKFDSSQLKHTET 280
           K+ LP  E+  +E     + +GIE FD S+LKH ET
Sbjct: 69  KVCLPKKEDIESEKEHKQMIEGIETFDPSKLKHAET 104



 Score = 35.5 bits (78), Expect = 1.3
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = +1

Query: 283 EKNPLPVXDAIDAENEKNRIPERXRVTXIPLS*SXRXRAIKNPXPTXDXIEQEKSA 450
           EK  LP  + I++E E  ++ E    T  P        ++KNP PT + IEQEK+A
Sbjct: 68  EKVCLPKKEDIESEKEHKQMIEGIE-TFDPSKLKHAETSVKNPLPTKEVIEQEKAA 122


>UniRef50_Q7PRR8 Cluster: ENSANGP00000012542; n=4;
           Endopterygota|Rep: ENSANGP00000012542 - Anopheles
           gambiae str. PEST
          Length = 131

 Score = 40.7 bits (91), Expect = 0.036
 Identities = 18/39 (46%), Positives = 26/39 (66%)
 Frame = +2

Query: 173 KIXLPSAENXATENTQXSLFDGIEKFDSSQLKHTETPRR 289
           K  LP+A +  +E  Q S+ +GIE FD+S+LKH ET  +
Sbjct: 40  KNCLPTAADVQSEKAQRSVIEGIEGFDASRLKHAETKEK 78


>UniRef50_O17389 Cluster: Tetra thymosin (Four thymosin repeat
           protein) protein 1; n=2; Caenorhabditis|Rep: Tetra
           thymosin (Four thymosin repeat protein) protein 1 -
           Caenorhabditis elegans
          Length = 151

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +2

Query: 158 STPMM-KIXLPSAENXATENTQXSLFDGIEKFDSSQLKHTETPRRTRFRSKT 310
           STP+  KI LPSA++   E     L D I  F S  LK TET  +    S T
Sbjct: 64  STPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPT 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,244,324
Number of Sequences: 1657284
Number of extensions: 7711423
Number of successful extensions: 14269
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14260
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)