Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0140
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.3  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +2

Query: 377 VLKAQYTDSVWLRR-KDWQSASRLRQGRSLAQFVCNLYSVSCLWICTILYRYCINQTNTA 553
           V+   Y    W R  K+ +S +++++ +    +    + V   +   I+Y  C+    + 
Sbjct: 84  VVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFFGVHLAYGVVIIYSICVQTEKSV 143

Query: 554 F 556
           F
Sbjct: 144 F 144


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 425 WQSASRLRQGRSLAQFVC 478
           W S S L  G  LA+F C
Sbjct: 378 WNSISSLSHGGQLARFKC 395


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 473 VCNLYSVSCLWICTILYR 526
           V  L  ++ +WICT++ R
Sbjct: 726 VSGLVYIATVWICTLMNR 743


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = -3

Query: 530 NTDTILCISINSLHYKDYKRTALANDPASIEMRFANLYAV 411
           NT+ +L  ++ +L  + +K       PA    +  N+Y++
Sbjct: 67  NTEPLLSEALTNLPGEKWKEMRATLSPAFTSSKIKNMYSL 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,164
Number of Sequences: 336
Number of extensions: 3544
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)