Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0136
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.83 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -3

Query: 529 DFFVFTLFSIRREYL*PCVQCDF--H*I*NRCQ--FTQYCLCHIRGVLITVYQTVC 374
           D  VF  +++RR Y   CV   F  H +   C   FT + L +   ++ TV+  +C
Sbjct: 44  DSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLC 99


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 344 CWPLYSSIFCTGAQSLLPIYQQFQLE*YQNHFSTI 240
           C  LY+    T    +L  YQ+ + + +QN + T+
Sbjct: 142 CQFLYNCFHSTLLLMILSRYQRLKAQLWQNRYETV 176


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 182 KSDNVYILGYVYCSRYFNKNDI 117
           K  +VY L    CSR+  K DI
Sbjct: 437 KIRDVYFLRLAICSRFTEKADI 458


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 198 NGQIGKIRQCLHFRLCLLFEIF 133
           NG I K  Q LH ++C L + F
Sbjct: 205 NGDIVKEHQNLHNKICNLIDEF 226


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 347 TCWPLYSSIFC 315
           TCW +Y  I+C
Sbjct: 57  TCWIIYVRIYC 67


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 12  NARFLVTGSIFILKQPVAATGFVKNYSSLVGNSLKNIVFIKIS 140
           N+   +TG  F          FV  +  L+ + L NI FIK++
Sbjct: 373 NSDIAITGKNFFSITRGLILSFVDYFVFLLCSILVNIAFIKLA 415


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = +2

Query: 401 YASNMAQAVLSELTTILNSMEIALHTRLKVLTSDTKKRKNKKIIVGVT 544
           Y S++   +L E+ TIL + ++  +    VL      ++ +K+  G+T
Sbjct: 16  YVSSVEYLILREIDTILKNDQMTRNYLDCVLDKGKCTKEAEKLKKGIT 63


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 322 YSVQVLRACFQYISNFSWNNTKIISRQYLRRFHE 221
           YSV V      YI    W+  +I+ R    RF E
Sbjct: 96  YSVVVFVVVMGYIGFIEWDKVEIV-RSQEGRFEE 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,960
Number of Sequences: 336
Number of extensions: 3541
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)