Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0136
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB...    29   8.5  

>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
            protein.
          Length = 2767

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = -2

Query: 278  FQLE*YQNHFSTIPKKVS*AQFSGLPAMAKLVKSDNVYILGYVYCSR--YFNKNDIFE 111
            F+L+ YQNHF  I K +S  Q   L   AK V+   + I+ Y+  S+  + N N   E
Sbjct: 1347 FRLDDYQNHFGDIAKLLSNFQ---LCCEAKEVREKTMSIVMYILESKKGHINLNSFLE 1401


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,529,025
Number of Sequences: 53049
Number of extensions: 583861
Number of successful extensions: 1247
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)