Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0133
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   110   4e-26
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   7.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  110 bits (265), Expect = 4e-26
 Identities = 56/126 (44%), Positives = 71/126 (56%)
 Frame = +1

Query: 241 DLGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRY 420
           D GS++   KDKFQ+NLDVQ FSPEEISVK  D  ++V            Y+SR FVRRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 421 ALPEXAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKEIKDQSEGTQD 600
            LP+      + S LSSDG+LTIT PRK  +    ER +PI  TG   K++  ++     
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122

Query: 601 AENKXG 618
              K G
Sbjct: 123 HSKKEG 128


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 182 QATAASMSFGVSANPKS*STRRLGQWL*RTRG 87
           ++ A   S G  A PK+   + +G W   TRG
Sbjct: 139 RSMAGFRSLGSGAPPKAQGGKHVGNWEQHTRG 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,420
Number of Sequences: 2352
Number of extensions: 16603
Number of successful extensions: 81
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)