Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0131
(774 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29837| Best HMM Match : MobC (HMM E-Value=6.8) 35 0.084
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_915| Best HMM Match : GIY-YIG (HMM E-Value=0.67) 32 0.45
SB_5834| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_9582| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 31 1.4
SB_28927| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3) 31 1.4
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9) 30 1.8
SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_59036| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8) 30 1.8
SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9) 30 1.8
SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35605| Best HMM Match : Treacle (HMM E-Value=0.54) 30 1.8
SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06) 30 2.4
SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_21276| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14) 30 2.4
SB_51787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.2
SB_4535| Best HMM Match : F5_F8_type_C (HMM E-Value=3.92364e-44) 29 3.2
SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035) 29 3.2
SB_36917| Best HMM Match : RinB (HMM E-Value=2.2) 29 4.2
SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_1672| Best HMM Match : JmjC (HMM E-Value=4.5) 29 5.5
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 29 5.5
SB_56510| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 5.5
SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_4681| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 28 7.3
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 28 7.3
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 28 7.3
SB_15850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 28 9.6
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_40824| Best HMM Match : His_leader (HMM E-Value=3.1) 28 9.6
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_29837| Best HMM Match : MobC (HMM E-Value=6.8)
Length = 327
Score = 34.7 bits (76), Expect = 0.084
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ + T ++ ++ H+ S TIT N + +NKRLSTLSSDRK+
Sbjct: 30 NRNTYQLFTKPNAPLQYVHRESNNPLTITKNIPAS--INKRLSTLSSDRKT 78
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S STIT N + +NKRLSTLSSD+++
Sbjct: 319 NRNTYQPFTKPNAPLQYVHRESNHPSTITKNIPAS--INKRLSTLSSDKET 367
>SB_915| Best HMM Match : GIY-YIG (HMM E-Value=0.67)
Length = 336
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N T ++ ++ H+ S TIT N +S +NKRLSTLSSD+++
Sbjct: 28 NRNPYQPSTKPNAPLQYVHRESNLQPTITKN-ISA-SINKRLSTLSSDKET 76
>SB_5834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +3
Query: 87 QHVPTNQDSTR--RHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
QH+P + R ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 185 QHLPAFHQTERPIQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 231
>SB_9582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N +NKRLSTLSSD+K+
Sbjct: 142 NRNTYQPFTKPNAPLQYVHRESNNPLTITKNIPGS--INKRLSTLSSDKKT 190
>SB_47093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 135 NRNTYQPFTKSNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 183
>SB_25338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1360
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKSPRQ 236
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++ Q
Sbjct: 1265 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKETFNQ 1316
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 163 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDKET 211
>SB_28927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDKET 131
>SB_20649| Best HMM Match : SpoIIP (HMM E-Value=1.3)
Length = 466
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKSPRQ 236
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++ Q
Sbjct: 371 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKETFNQ 422
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 102 NQDSTRRHHHQASQTDSTITGNDLSCYHLNKR 197
++ ++H HQ + +T TGND + Y +NK+
Sbjct: 1031 DKQQIQQHQHQTTNAATTNTGNDSNSYVINKQ 1062
>SB_28413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 131
>SB_25522| Best HMM Match : Saccharop_dh_N (HMM E-Value=3.9)
Length = 285
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 135 NRNTYQPFTKPNAPLQYVHRESSHPPTITKNIPAS--INKRLSTLSSDKET 183
>SB_17583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 37 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 85
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 159 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 207
>SB_59036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 30 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 78
>SB_58849| Best HMM Match : zf-piccolo (HMM E-Value=2.8)
Length = 243
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 154 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 202
>SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 30 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 78
>SB_37768| Best HMM Match : SpoVG (HMM E-Value=7.9)
Length = 163
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 131
>SB_37548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/51 (35%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 83 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 131
>SB_35605| Best HMM Match : Treacle (HMM E-Value=0.54)
Length = 776
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 91 TSPQTRILRAVITTKRHRPIQPLLATIYPATT*TSDSVHCHQTARA 228
T+PQ R+VIT +RHRPI+ ++ P T +S + C + +A
Sbjct: 703 TTPQVANKRSVITRRRHRPIEG--SSSEPDTPASSCTSSCSKAIKA 746
>SB_51880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD ++
Sbjct: 32 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDEET 80
>SB_51100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD ++
Sbjct: 37 NRNTYQPFTKPNAPLQYVHRESNHQPTITKNIPAS--INKRLSTLSSDEET 85
>SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06)
Length = 1826
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S TIT N +S +NKRLSTLSS++++
Sbjct: 707 NRNTYQPFTKPNAPLQYVHRESNNPPTITKN-ISA-SINKRLSTLSSNKET 755
>SB_13523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S +TIT N + +NKRLSTLS+D+++
Sbjct: 50 NRNTYQSFTKPNAPLQYVHRESNHPTTITKNIPAS--INKRLSTLSADKET 98
>SB_9586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T + ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 987 NRNTYQPFTKPSAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 1035
>SB_21276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 129 HQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
H+ S TIT N + +NKRLSTLSSD+K+
Sbjct: 78 HRESNHPPTITKNIPAS--INKRLSTLSSDKKT 108
>SB_17897| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-14)
Length = 1217
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ H+ S T+T N + +NKRLSTLSSD+++
Sbjct: 924 NRNTYQPFTKPNAPLQYVHRESNHPPTVTKNIPAS--INKRLSTLSSDKET 972
>SB_51787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 99 TNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 71 TKPNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 111
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRK 224
++N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD++
Sbjct: 1128 NRNTYQPFTKLNAPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKE 1175
>SB_4535| Best HMM Match : F5_F8_type_C (HMM E-Value=3.92364e-44)
Length = 972
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 78 QNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
+N+ T DS+ ++ H+ S +IT N + +N+RLS LSSD+ S
Sbjct: 493 RNAHQPYTKPDSSLQYVHRESNHPPSITKNIPA--GINRRLSALSSDQAS 540
>SB_30130| Best HMM Match : Cadherin (HMM E-Value=0.0035)
Length = 391
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
+ N+ T ++ ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 59 NHNTYQPFTKPNAPLQYVHRESNHPLTITKNIPTS--INKRLSTLSSDKET 107
>SB_36917| Best HMM Match : RinB (HMM E-Value=2.2)
Length = 522
Score = 29.1 bits (62), Expect = 4.2
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +3
Query: 54 PQRQPQSHQNSQHVPTNQDSTRRH--HHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
P +PQS + + TN+ RR HH+ ++ S +TG KR S L+
Sbjct: 95 PSGRPQSRRRKKSA-TNELRVRRKSSHHKYTEDASRLTGLPTHRISSYKRDSPLALQPSL 153
Query: 228 PRQKPHCFPSIKNRFSLWSNQDLNTKIFCRHTKSKSRVGQT 350
+P S+ S W + LN K F K +GQT
Sbjct: 154 GEFEP---ASLN---SSWPQEFLNRKFFTGSQFEKYTIGQT 188
>SB_33335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T + ++ H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 30 NRNTYQPFTKPNVPLQYVHRESNHPPTITKNIPAS--INKRLSTLSSDKET 78
>SB_1672| Best HMM Match : JmjC (HMM E-Value=4.5)
Length = 281
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 78 QNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
+N+ T +S+ ++ H+ S +IT N + +NKRLS LSSD+ S
Sbjct: 63 RNAHQPYTKPNSSLQYVHRESNHPPSITKNIPA--GINKRLSALSSDQAS 110
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 126 HHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKSPRQKPHCFPSIKNRFSLWSNQ 290
++++S+ DS G+ + ++ S SS R SPR P PSI R + + Q
Sbjct: 241 YNRSSKYDSQSGGSQRTTPAVSPYQSPSSSARSSPRGSPTASPSISRRRAKFQQQ 295
>SB_56510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 78 QNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKSPRQKPHCFPS 257
+N+ T +S+ ++ H+ S +IT N + +N+RLS LSSD+ S Q P
Sbjct: 142 RNAHQPYTKPNSSLQYVHRESNHPPSITKNIPA--GINRRLSALSSDQASFDQTAPTLPE 199
Query: 258 IKNR 269
R
Sbjct: 200 STRR 203
>SB_38124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 221 QEPKTEASLLSIHQEQVQPLVEPR-PQHQNLLPPYEVKISSRSDGFVIDEDLTDDSLQYL 397
QE + E + +++ + +++ L E R + Q + +I + +E+ ++ L L
Sbjct: 215 QEREREKARIALEENKLKRLREKRREEEQRAVQEIHERIRREEESEEEEEEEEEEELVPL 274
Query: 398 TDDVKELIKIARNPGD 445
+DD+++ I A PG+
Sbjct: 275 SDDMEQKINAALAPGN 290
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/15 (73%), Positives = 15/15 (100%)
Frame = +3
Query: 183 HLNKRLSTLSSDRKS 227
H+NKRLSTLSSD+++
Sbjct: 1387 HINKRLSTLSSDKET 1401
>SB_17994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKSPRQ 236
++N+ T ++ ++ H+ S TIT N + ++KRLSTLSSD+++ Q
Sbjct: 240 NRNTYQPFTKPNAPLQYVHRESNHPPTITKNIPAS--ISKRLSTLSSDKETFNQ 291
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 45 HPYPQRQPQSHQNSQHVPTNQDST 116
HP P +H N+ H P NQ ST
Sbjct: 629 HPSNVHTPDNHLNTVHTPDNQPST 652
>SB_47174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 144 TDSTITGNDLSCYHLNKRLSTLSSDR--KSPRQKPHC 248
+ T GN L LN +L LSS+R KS KPHC
Sbjct: 45 SSGTCNGNSLRV--LNAQLGILSSERVTKSTSAKPHC 79
>SB_22380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 49 HIHNDNHKATRTHNTSPQTRILRAVITTKRHRPIQPLLATIYPATT*TSDSVHCHQTARA 228
H+ H + H T+ + + +TT+RH IQ + T TT + H T R
Sbjct: 383 HVTTQCHVTIQRHVTTQRQVTTQRQVTTQRHVTIQRHVTTQRHVTTQRQVTTQRHVTTRR 442
Query: 229 Q 231
Q
Sbjct: 443 Q 443
>SB_6974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 129 HQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 4 HRESNHPPTITKNIPAS--INKRLSTLSSDKET 34
>SB_4681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 724 CCWRTRDRSLHVPPILDRAIFNCARAPPFEDSTNAFMTS 608
C + R + V P+++ +F + PFED T+A S
Sbjct: 43 CVFSMRVCGVFVKPVIESFVFKRKKYAPFEDRTHALQIS 81
>SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 37 NSXIHIHNDNHKATRTHNTSPQTRILRAVITTKRH 141
N IHN N TRTHN + TR ++ T+ H
Sbjct: 99 NMVTRIHNHN-MVTRTHNHNMVTRAHNHIMVTRAH 132
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 258 IKNRFSLWSNQDLNTKIFCRHTKSK-SRVGQTALLLMK 368
I+++ LW NQ + I C KSK +R GQT L+K
Sbjct: 1727 IRDQVMLWYNQHRSDDIKCCVRKSKRNRKGQTLRFLLK 1764
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 4/92 (4%)
Frame = +3
Query: 45 HPYPQRQPQSHQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDR- 221
H + P+S+ +QH P + +TR DS T + ++ + L +R
Sbjct: 436 HTHNNHAPESYPAAQHTPEHLTNTRNTPDHTHVGDSEGTSPQYTLTKVSPEMEALVRERN 495
Query: 222 ---KSPRQKPHCFPSIKNRFSLWSNQDLNTKI 308
+ RQ+ + + R N DLN ++
Sbjct: 496 DLARELRQRTEAYEAELRRLRA-QNDDLNQQV 526
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 129 HQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
H+ S TIT N + +NKRLSTLSSD+++
Sbjct: 210 HRESNHPPTITKNIPAS--INKRLSTLSSDKET 240
>SB_15850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKSPRQ 236
++N+ T ++ ++ ++ S TIT N ++NKRLSTLSSD+++ Q
Sbjct: 55 NRNTYQPFTKPNAPLQYVNRESNHPPTITKN--IPVNINKRLSTLSSDKETFNQ 106
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Frame = +3
Query: 78 QNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS------PRQK 239
+N+ T +S+ ++ H+ S +IT N + +N+RLS LSSD+ S P QK
Sbjct: 1138 RNAHQPYTKPNSSLQYVHRESNHPPSITKNIPA--GINRRLSALSSDQASFDQTAPPYQK 1195
Query: 240 P 242
P
Sbjct: 1196 P 1196
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -1
Query: 447 SSPGLRAILISSFTSSVKYCKLSSVRSSSITKPSDLLEILTSYGGRRFWC*GLGST 280
+S G L+ TSSV +C + S +T S+ +++ + G + W ST
Sbjct: 665 ASSGEDLCLLDDHTSSVSFCCFMNQGESVVTVCSNCIKVWSCSSGEQTWVYNSSST 720
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 317 PYEVKISSRSDGFVIDEDLTDDSLQYLTDDVKELIKIARNP-GDDRVVDVWDGF 475
P+ VK+ S DED TD +T DVKE K + P DD+ V+ + F
Sbjct: 5226 PHVVKVQVSSGQAKKDEDFTDPDPLEVTFDVKEDRKTIQIPITDDQKVEGDESF 5279
>SB_40824| Best HMM Match : His_leader (HMM E-Value=3.1)
Length = 456
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 QSHQNSQHVPTNQDSTRRHHHQASQTDSTIT-GNDLSCYHLNKRLSTLSSDRKS 227
Q H + + + T S+++HHHQ TIT + YH +S +++ S
Sbjct: 254 QHHYHHRSITTTSVSSQKHHHQHHYNIITITETSSRHQYHHRNIISIITTSLSS 307
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -1
Query: 471 PSQTSTTLSSPGLRAILISSFTSSVKYCKLSSVRSSSITKPSDLLEILTSY 319
PS TSTT +P +S+TS+ Y +S ++ P+ TSY
Sbjct: 42 PSYTSTTSYTPTPSYTCTTSYTSTTSYTSTTSYTPTTSYTPTTSYTPTTSY 92
>SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +3
Query: 75 HQNSQHVPTNQDSTRRHHHQASQTDSTITGNDLSCYHLNKRLSTLSSDRKS 227
++N+ T ++ ++ ++ S TIT N + +NKRLSTLSSD+++
Sbjct: 43 NRNTYQPFTKPNAPLQYVYRESNHPPTITKNIPAS--INKRLSTLSSDKET 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,826,391
Number of Sequences: 59808
Number of extensions: 509403
Number of successful extensions: 1942
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1936
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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