Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0130
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.92 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   6.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   6.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 13/53 (24%), Positives = 23/53 (43%)
 Frame = +1

Query: 205 IMRYEGFFVASTRLLVFKYIFYFKMSTIASVIINEVTFIVFYVLF*FVDALNY 363
           ++ Y  F + +   L+  Y FY+    +  V      FI+F V   F+  + Y
Sbjct: 83  LLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 417 ELFIYLLFLISCNNKAFTIIQSIDELEQDIEHDKCHLVNYY 295
           +LF+Y+   +S           ID  E +I +D C L  YY
Sbjct: 134 QLFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSL--YY 172


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 523 RQFNEQQIIQNSTTHS 570
           +QF+ QQ+ Q++TT +
Sbjct: 16  QQFHHQQLFQSATTEA 31


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 523 RQFNEQQIIQNSTTHS 570
           +QF+ QQ+ Q++TT +
Sbjct: 16  QQFHHQQLFQSATTEA 31


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 495 FFVYITYGFLCRVLWNKLNYILNYN*ELFIYLLFLIS 385
           +F YI   F C+++    +Y    N  + + +  LI+
Sbjct: 389 YFAYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIA 425


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 495 FFVYITYGFLCRVLWNKLNYILNYN*ELFIYLLFLIS 385
           +F YI   F C+++    +Y    N  + + +  LI+
Sbjct: 389 YFAYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIA 425


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 495 FFVYITYGFLCRVLWNKLNYILNYN*ELFIYLLFLIS 385
           +F YI   F C+++    +Y    N  + + +  LI+
Sbjct: 389 YFAYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIA 425


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 495 FFVYITYGFLCRVLWNKLNYILNYN*ELFIYLLFLIS 385
           +F YI   F C+++    +Y    N  + + +  LI+
Sbjct: 389 YFAYIFGKFACKIMIQGFSYAFPVNLTIPVSISLLIA 425


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 265 FYFKMSTIASVIINEVTFIVFYVLF 339
           F  + STI SV+    TF++  V F
Sbjct: 326 FDIERSTILSVLGTACTFLIIIVQF 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,615
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)