Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0128
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.              33   1.4  
U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.              33   1.4  
BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.        33   1.4  
BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.        33   1.4  

>Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -2

Query: 251  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 81
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -2

Query: 251  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 81
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -2

Query: 251  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 81
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -2

Query: 251  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 81
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.132    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,611,206
Number of Sequences: 237096
Number of extensions: 1570877
Number of successful extensions: 7244
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7244
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)