Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0128
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z75549-8|CAD60424.1| 297|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z77656-2|CAE17769.1| 724|Caenorhabditis elegans Hypothetical pr... 30 1.5
U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 29 3.4
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 29 3.4
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z72514-9|CAA96680.3| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 414 NISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRH 235
+ +C ++ T++ + + L VI VI R + VI ++ + H S SI L +W+
Sbjct: 273 DFDTCVSLATTNCLLIVSLLVIKLVIERFVVNVISTRSVSSIETHLVSQSIYLFSMWFAL 332
Query: 234 KFVFCRTRGTCFQWIYAFSFRWST 163
K + + + W+T
Sbjct: 333 KLAHPSAQPVAAWVFFTSNLAWTT 356
>Z68001-3|CAO78709.1| 449|Caenorhabditis elegans Hypothetical
protein T10B10.8 protein.
Length = 449
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = -1
Query: 414 NISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRH 235
+ +C ++ T++ + + L VI VI R + VI ++ + H S SI L +W+
Sbjct: 273 DFDTCVSLATTNCLLIVSLLVIKLVIERFVVNVISTRSVSSIETHLVSQSIYLFSMWFAL 332
Query: 234 KFVFCRTRGTCFQWIYAFSFRWST 163
K + + + W+T
Sbjct: 333 KLAHPSAQPVAAWVFFTSNLAWTT 356
>Z75549-8|CAD60424.1| 297|Caenorhabditis elegans Hypothetical
protein T19C4.9 protein.
Length = 297
Score = 32.3 bits (70), Expect = 0.36
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = -1
Query: 510 LTNKNAYLTAFVRYKLYNLCIADC--STFTSRNINISSCRAIKTSHFHIRIV-LSVISFV 340
L N ++ AFV +L ++ DC + F R + + I FH+ V S+ + V
Sbjct: 49 LMNTFTFIIAFVILRLGSITCYDCLLAPFFMRLGDFAPLSFISAMSFHMAYVQYSLTTMV 108
Query: 339 IVRAIFIVIPHTLINKLWFHFGSDSIVLIF 250
+ + ++I H + +W F +VLI+
Sbjct: 109 SLNRLTVLINHKVFEPIWKKFTWLFVVLIY 138
>Z77656-2|CAE17769.1| 724|Caenorhabditis elegans Hypothetical
protein F07B10.4 protein.
Length = 724
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -1
Query: 390 KTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRHKFVFCRTR 211
KT +HI++ + + +++A+F+V+P T I L +F S I Y + + +
Sbjct: 627 KTVKYHIQVTVLFLCSCVIQALFVVLPVTHI-VLCVYFDSFKIYTKDYIY-YSLLTQAHQ 684
Query: 210 GTCFQWIYAFS 178
GT F Y S
Sbjct: 685 GTAFTLFYVLS 695
>U53342-5|AAA96217.1| 178|Caenorhabditis elegans Hypothetical
protein F01G12.1 protein.
Length = 178
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 309 HTLINKLWFHFGSDSIVLIFVW-YRHKFVFCRTRGTCF-QWIYA 184
HT+ K+WFH+G D +VL W K G F WI+A
Sbjct: 116 HTM--KMWFHWGFDEVVLFDFWRIDDKNALAVILGAGFGHWIFA 157
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = -1
Query: 693 PPRVXXXXFSGLNIFNSMVMLS-----GAFXNYIINSCDSRSTISILFN---TSPSCFCA 538
PP V N++ + + LS F ++ + S ++ +TI++ FN T P C
Sbjct: 681 PPNVTSNPLRRQNVWQASINLSKVDDDSLFPDFPVTSSNTLTTINLSFNKFHTFPFCLAC 740
Query: 537 SCVVLRELKLTNKN 496
+C L L ++N +
Sbjct: 741 TCPRLLILNMSNNS 754
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = -1
Query: 693 PPRVXXXXFSGLNIFNSMVMLS-----GAFXNYIINSCDSRSTISILFN---TSPSCFCA 538
PP V N++ + + LS F ++ + S ++ +TI++ FN T P C
Sbjct: 679 PPNVTSNPLRRQNVWQASINLSKVDDDSLFPDFPVTSSNTLTTINLSFNKFHTFPFCLAC 738
Query: 537 SCVVLRELKLTNKN 496
+C L L ++N +
Sbjct: 739 TCPRLLILNMSNNS 752
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical
protein ZK512.3 protein.
Length = 1418
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = -1
Query: 543 CASCVVLRE----LKLTN-KNAYLTAFVRYKLYNLCIADCSTFTSRNINISSCRAIKTSH 379
C C +L L+ +N N +++R +LY L +ADC T ++ + S+ ++
Sbjct: 264 CELCAILHSSHLLLETSNFDNDKFISWLRSQLYPLGLADCYTLITKLLVSSNSGDVQLIE 323
Query: 378 FHIRIVLSVISFVIV 334
F LS +S V+V
Sbjct: 324 FIDSSQLSELSSVVV 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.132 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,109,657
Number of Sequences: 27780
Number of extensions: 255457
Number of successful extensions: 812
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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