Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0123
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   3.1  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      24   4.1  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   9.6  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 624 LGVRVRRHNEPYRETARDRRHYLSQRVPRWQ 716
           L V++  HN+ + E  + + HY S R   W+
Sbjct: 444 LRVQIDEHNKNFYELKKKKDHYQSLRNDIWK 474


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = -2

Query: 344 HSGMDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPCFFRNSRIFSCXLG 165
           +S  +RP  +    AS+  V+Q+R  + +       T T+PT    C  R  R  SC +G
Sbjct: 33  NSPAERPHIQPFQMASAPLVAQSRSAMVQT-----LTCTNPTCSAQCRGRGYRRGSCTIG 87

Query: 164 NLF 156
             F
Sbjct: 88  RCF 90


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 166 PRXQEKIREFRKKHGSTKVGEVTVDMMYG 252
           P  QE++R+   +      GE+T DM+ G
Sbjct: 334 PHIQERLRDELNRSIDANGGELTYDMVMG 362


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 343 CQQQLPKAKGGEEPLPEGLFW 405
           C   LP+ KGG  P     +W
Sbjct: 254 CDTSLPRRKGGPYPRRRAYWW 274


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 346 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQ 441
           QQQ  +++  ++  P+ L W  V    P++ Q
Sbjct: 401 QQQQQQSQQQQQQQPQQLLWTTVVRSCPSQRQ 432


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 771,143
Number of Sequences: 2352
Number of extensions: 15452
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)