Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0123
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089318-1|AAL90056.1|  522|Drosophila melanogaster AT12538p pro...   316   1e-86
AE014298-884|AAF46159.1|  464|Drosophila melanogaster CG3861-PA,...   316   1e-86
AE014298-883|AAN09169.1|  522|Drosophila melanogaster CG3861-PB,...   316   1e-86
AY058419-1|AAL13648.1|  478|Drosophila melanogaster GH19789p pro...   176   3e-44
AE014297-1450|AAF54748.2|  478|Drosophila melanogaster CG14740-P...   176   3e-44
AY069260-1|AAL39405.1|  261|Drosophila melanogaster GM05016p pro...    43   5e-04
Z30342-1|CAA82998.1|  356|Drosophila melanogaster torso like pro...    31   1.2  
X75614-1|CAA53285.1|  353|Drosophila melanogaster torso-like pro...    31   1.2  
AY071336-1|AAL48958.1|  353|Drosophila melanogaster RE37079p pro...    31   1.2  
AE014297-3041|AAN13883.1|  353|Drosophila melanogaster CG6705-PB...    31   1.2  
AE014297-3040|AAF55919.1|  353|Drosophila melanogaster CG6705-PA...    31   1.2  
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro...    29   8.5  
BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p pro...    29   8.5  
AY052044-1|AAK93468.1|  581|Drosophila melanogaster LP06006p pro...    29   8.5  
AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB...    29   8.5  

>AY089318-1|AAL90056.1|  522|Drosophila melanogaster AT12538p
           protein.
          Length = 522

 Score =  316 bits (777), Expect = 1e-86
 Identities = 143/187 (76%), Positives = 165/187 (88%)
 Frame = +1

Query: 160 RFPRXQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIP 339
           + P+ QE+++ FRK+HG+TK+GE T+DMMYGGMRGIK LV ETSVLDADEGIRFRGLSIP
Sbjct: 99  KVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIP 158

Query: 340 ECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMP 519
           ECQ+ LP A GG EPLPEGLFWLL+TG++PT++Q + LS+EWA RA LP HVVTMLNNMP
Sbjct: 159 ECQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMP 218

Query: 520 GKLHPMSQFSAAVTALNSESKFAKAYSXGVHKSKYWEYVYEDTMNLIAKLPVIAATIYRN 699
             LHPMSQF+AAVTALN +SKFAKAYS GVHKSKYWEYVYED+M+LIAKLPV+AATIY N
Sbjct: 219 TTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCN 278

Query: 700 VYRDGKG 720
            YR GKG
Sbjct: 279 TYRGGKG 285


>AE014298-884|AAF46159.1|  464|Drosophila melanogaster CG3861-PA,
           isoform A protein.
          Length = 464

 Score =  316 bits (777), Expect = 1e-86
 Identities = 143/187 (76%), Positives = 165/187 (88%)
 Frame = +1

Query: 160 RFPRXQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIP 339
           + P+ QE+++ FRK+HG+TK+GE T+DMMYGGMRGIK LV ETSVLDADEGIRFRGLSIP
Sbjct: 41  KVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIP 100

Query: 340 ECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMP 519
           ECQ+ LP A GG EPLPEGLFWLL+TG++PT++Q + LS+EWA RA LP HVVTMLNNMP
Sbjct: 101 ECQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMP 160

Query: 520 GKLHPMSQFSAAVTALNSESKFAKAYSXGVHKSKYWEYVYEDTMNLIAKLPVIAATIYRN 699
             LHPMSQF+AAVTALN +SKFAKAYS GVHKSKYWEYVYED+M+LIAKLPV+AATIY N
Sbjct: 161 TTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCN 220

Query: 700 VYRDGKG 720
            YR GKG
Sbjct: 221 TYRGGKG 227


>AE014298-883|AAN09169.1|  522|Drosophila melanogaster CG3861-PB,
           isoform B protein.
          Length = 522

 Score =  316 bits (777), Expect = 1e-86
 Identities = 143/187 (76%), Positives = 165/187 (88%)
 Frame = +1

Query: 160 RFPRXQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIP 339
           + P+ QE+++ FRK+HG+TK+GE T+DMMYGGMRGIK LV ETSVLDADEGIRFRGLSIP
Sbjct: 99  KVPQEQERVKNFRKQHGATKMGETTIDMMYGGMRGIKALVTETSVLDADEGIRFRGLSIP 158

Query: 340 ECQQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMP 519
           ECQ+ LP A GG EPLPEGLFWLL+TG++PT++Q + LS+EWA RA LP HVVTMLNNMP
Sbjct: 159 ECQKVLPAADGGTEPLPEGLFWLLLTGEVPTKSQVQQLSREWAERAALPQHVVTMLNNMP 218

Query: 520 GKLHPMSQFSAAVTALNSESKFAKAYSXGVHKSKYWEYVYEDTMNLIAKLPVIAATIYRN 699
             LHPMSQF+AAVTALN +SKFAKAYS GVHKSKYWEYVYED+M+LIAKLPV+AATIY N
Sbjct: 219 TTLHPMSQFAAAVTALNHDSKFAKAYSDGVHKSKYWEYVYEDSMDLIAKLPVVAATIYCN 278

Query: 700 VYRDGKG 720
            YR GKG
Sbjct: 279 TYRGGKG 285


>AY058419-1|AAL13648.1|  478|Drosophila melanogaster GH19789p
           protein.
          Length = 478

 Score =  176 bits (428), Expect = 3e-44
 Identities = 79/189 (41%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
 Frame = +1

Query: 157 KRFPRXQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSI 336
           K+ P  +EK    +  HG   +G+++V+ + GGMRG+  L  ETS LD ++GI +RG  +
Sbjct: 39  KKIPIEREKFLGIKCLHGKKIIGQISVNSVIGGMRGLPLLFCETSSLDKNKGIYYRGKLL 98

Query: 337 PECQQQLPKAKGG-EEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNN 513
            +   +LP+ + G +E  PEG F+LL +G +PT+ +A+ ++ EW  R  +P + + M+++
Sbjct: 99  KDVCAKLPRVQEGTQEGTPEGCFFLLTSGSMPTKKEAQEVTNEWLKRGSVPRYCLRMIDS 158

Query: 514 MPGKLHPMSQFSAAVTALNSESKFAKAYSXGVHKSKYWEYVYEDTMNLIAKLPVIAATIY 693
           M  ++HPM+Q  AA   LN +S+F +AY+ G  ++ YW+Y YED+MNLIA LP +AA IY
Sbjct: 159 MDKRVHPMAQLCAASACLNPQSQFVEAYTKGARRADYWKYSYEDSMNLIAMLPTVAAAIY 218

Query: 694 RNVYRDGKG 720
            NV+RDG+G
Sbjct: 219 SNVFRDGEG 227


>AE014297-1450|AAF54748.2|  478|Drosophila melanogaster CG14740-PA
           protein.
          Length = 478

 Score =  176 bits (428), Expect = 3e-44
 Identities = 79/189 (41%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
 Frame = +1

Query: 157 KRFPRXQEKIREFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSI 336
           K+ P  +EK    +  HG   +G+++V+ + GGMRG+  L  ETS LD ++GI +RG  +
Sbjct: 39  KKIPIEREKFLGIKCLHGKKIIGQISVNSVIGGMRGLPLLFCETSSLDKNKGIYYRGKLL 98

Query: 337 PECQQQLPKAKGG-EEPLPEGLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNN 513
            +   +LP+ + G +E  PEG F+LL +G +PT+ +A+ ++ EW  R  +P + + M+++
Sbjct: 99  KDVCAKLPRVQEGTQEGTPEGCFFLLTSGSMPTKKEAQEVTNEWLKRGSVPRYCLRMIDS 158

Query: 514 MPGKLHPMSQFSAAVTALNSESKFAKAYSXGVHKSKYWEYVYEDTMNLIAKLPVIAATIY 693
           M  ++HPM+Q  AA   LN +S+F +AY+ G  ++ YW+Y YED+MNLIA LP +AA IY
Sbjct: 159 MDKRVHPMAQLCAASACLNPQSQFVEAYTKGARRADYWKYSYEDSMNLIAMLPTVAAAIY 218

Query: 694 RNVYRDGKG 720
            NV+RDG+G
Sbjct: 219 SNVFRDGEG 227


>AY069260-1|AAL39405.1|  261|Drosophila melanogaster GM05016p
           protein.
          Length = 261

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = +1

Query: 649 MNLIAKLPVIAATIYRNVYRDGKG 720
           M+LIAKLPV+AATIY N YR GKG
Sbjct: 1   MDLIAKLPVVAATIYCNTYRGGKG 24


>Z30342-1|CAA82998.1|  356|Drosophila melanogaster torso like
           protein.
          Length = 356

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 171 PWESFPGEYFLNSSVQRLDLEVELSQSDMLSAILRVLK 58
           PWE+F G +F +++ ++L +     Q D    ++RV++
Sbjct: 121 PWEAFTGGWFPDNAAKKLGINTSFIQGDYSYVLVRVVR 158


>X75614-1|CAA53285.1|  353|Drosophila melanogaster torso-like
           protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 171 PWESFPGEYFLNSSVQRLDLEVELSQSDMLSAILRVLK 58
           PWE+F G +F +++ ++L +     Q D    ++RV++
Sbjct: 118 PWEAFTGGWFPDNAAKKLGINTSFIQGDYSYVLVRVVR 155


>AY071336-1|AAL48958.1|  353|Drosophila melanogaster RE37079p
           protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 171 PWESFPGEYFLNSSVQRLDLEVELSQSDMLSAILRVLK 58
           PWE+F G +F +++ ++L +     Q D    ++RV++
Sbjct: 118 PWEAFTGGWFPDNAAKKLGINTSFIQGDYSYVLVRVVR 155


>AE014297-3041|AAN13883.1|  353|Drosophila melanogaster CG6705-PB,
           isoform B protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 171 PWESFPGEYFLNSSVQRLDLEVELSQSDMLSAILRVLK 58
           PWE+F G +F +++ ++L +     Q D    ++RV++
Sbjct: 118 PWEAFTGGWFPDNAAKKLGINTSFIQGDYSYVLVRVVR 155


>AE014297-3040|AAF55919.1|  353|Drosophila melanogaster CG6705-PA,
           isoform A protein.
          Length = 353

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -1

Query: 171 PWESFPGEYFLNSSVQRLDLEVELSQSDMLSAILRVLK 58
           PWE+F G +F +++ ++L +     Q D    ++RV++
Sbjct: 118 PWEAFTGGWFPDNAAKKLGINTSFIQGDYSYVLVRVVR 155


>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 353 CCWHSGMDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPC 204
           CC +S    P+ ++P    S   S      P  PPY++    SP   E C
Sbjct: 490 CCDNSRAGAPKPKLPPPTPSPTAS------PTAPPYVLPNTPSPDPREEC 533


>BT001597-1|AAN71352.1| 1047|Drosophila melanogaster RE29416p
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 353 CCWHSGMDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPC 204
           CC +S    P+ ++P    S   S      P  PPY++    SP   E C
Sbjct: 490 CCDNSRAGAPKPKLPPPTPSPTAS------PTAPPYVLPNTPSPDPREEC 533


>AY052044-1|AAK93468.1|  581|Drosophila melanogaster LP06006p
           protein.
          Length = 581

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 353 CCWHSGMDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPC 204
           CC +S    P+ ++P    S   S      P  PPY++    SP   E C
Sbjct: 24  CCDNSRAGAPKPKLPPPTPSPTAS------PTAPPYVLPNTPSPDPREEC 67


>AE014296-779|AAF47850.1| 1047|Drosophila melanogaster CG15002-PB
           protein.
          Length = 1047

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 353 CCWHSGMDRPRKRIPSSASSTEVSQTRPLIPRMPPYIISTVTSPTLVEPC 204
           CC +S    P+ ++P    S   S      P  PPY++    SP   E C
Sbjct: 490 CCDNSRAGAPKPKLPPPTPSPTAS------PTAPPYVLPNTPSPDPREEC 533


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,297,243
Number of Sequences: 53049
Number of extensions: 702030
Number of successful extensions: 2242
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2240
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)