Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0122
(774 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 49 3e-06
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 44 2e-04
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 32 0.40
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 31 0.91
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 30 1.6
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 29 2.8
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 28 8.5
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z48638-8|CAA88568.1| 237|Caenorhabditis elegans Hypothetical pr... 28 8.5
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 504 EERIVGGHNAELNEWPWIVALFNA-GRQFCGXSIIDDKHVISAAHCVA 644
+ R++GG + + WPW V L + G CG S+ID V++AAHC A
Sbjct: 55 DHRLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHCFA 102
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 510 RIVGGHNAELNEWPWIVALFNAGRQ--FCGXSIIDDKHVISAAHC 638
R+VGG +PW AL N + CG SI+D H+I+AAHC
Sbjct: 26 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHC 70
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 510 RIVGGHNAELNEWPWIVALFNAGRQ----FCGXSIIDDKHVISAAHCVAHM 650
RI+GG++ + + W+ L + G CG ++IDD +++AAHC +
Sbjct: 37 RIIGGNSID-DGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQL 86
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Frame = +3
Query: 504 EERIVGGHNAELNEWPWIVALFN---------AGRQFCGXSIIDDKHVISAAHCVAHMT 653
+ +I G AE++E PW V + + C ++ +H+++A HC A T
Sbjct: 38 KSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHCAATYT 96
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 531 AELNEWPWIVALFNAGRQFCGXSIIDDKHVISAAH 635
+++ +PW V+ G G SII H+I+AAH
Sbjct: 23 SKIKNFPWAVSFTVDGVNRLGGSIISPYHIITAAH 57
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +3
Query: 510 RIVGGHNAELNEWPWIVA--LFNAGRQF---CGXSIIDDKHVISAAHCVA 644
++ G +A +E PW V L++ Q C +I+ +H++ A HC A
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFA 211
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
Frame = +3
Query: 549 PWIVALFNAGRQ-----FCGXSIIDDKHVISAAHC 638
PW V + R+ CG ++I KHV++AAHC
Sbjct: 44 PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 250 PTRLTTQRQPIHLQWVSRNHHKLNQ 324
PT T+ QP+ SR+HHKLNQ
Sbjct: 95 PTSADTEEQPV-TNVRSRSHHKLNQ 118
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 250 PTRLTTQRQPIHLQWVSRNHHKLNQ 324
PT T+ QP+ SR+HHKLNQ
Sbjct: 155 PTSADTEEQPV-TNVRSRSHHKLNQ 178
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 250 PTRLTTQRQPIHLQWVSRNHHKLNQ 324
PT T+ QP+ SR+HHKLNQ
Sbjct: 158 PTSADTEEQPV-TNVRSRSHHKLNQ 181
>Z48638-8|CAA88568.1| 237|Caenorhabditis elegans Hypothetical
protein ZK892.6 protein.
Length = 237
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -1
Query: 546 IRLALRYVHQQCALHLEHRMCYRMPLVHSSYRKR 445
I L++ +HQ C L++ H+ + + H ++KR
Sbjct: 200 ITLSVEKLHQLCNLNINHQESHLQDVTHPIFKKR 233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,572,085
Number of Sequences: 27780
Number of extensions: 302294
Number of successful extensions: 866
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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