Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0122
         (774 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    42   6e-06
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.5  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   7.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
 Frame = +3

Query: 498 QDEERIVGGHNAELNEWPWIVAL---FNAGRQFCGXSIIDDKHVISAAHCV 641
           ++  RIVGG N  +NE+P +  +   +  G   CG +II  ++V++AAHC+
Sbjct: 156 KNPSRIVGGTNTGINEFPMMAGIKRTYEPG-MICGATIISKRYVLTAAHCI 205


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 253 TRLTTQRQPIHLQWVSRNHHKLNQHHPL 336
           T  TT    I  + + R+HH  N HH L
Sbjct: 124 TATTTATGLIKQETLQRHHHLQNHHHHL 151


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 533 RAKRMALDRSSV*CWASILR 592
           RAK   L +S++ CWA+I +
Sbjct: 246 RAKSEILYKSTLHCWATIYK 265


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 533 RAKRMALDRSSV*CWASILR 592
           RAK   L +S++ CWA+I +
Sbjct: 246 RAKSEILYKSTLHCWATIYK 265


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -1

Query: 372 AWWYWAA 352
           AWW+W A
Sbjct: 28  AWWFWTA 34


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 5/17 (29%), Positives = 10/17 (58%)
 Frame = +3

Query: 507 ERIVGGHNAELNEWPWI 557
           E ++  H   L++W W+
Sbjct: 614 EFVINPHQQHLDQWNWV 630


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 496 TSYVLPYAVGPFFIP 452
           +SYV+  A+G FF+P
Sbjct: 196 SSYVIFSAMGSFFLP 210


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 526 CPPTMRSSS*TSYVLPYAVGPFFIP 452
           CP     ++   YV+  A+G F+IP
Sbjct: 235 CPWICELTNDAGYVVYSALGSFYIP 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,390
Number of Sequences: 438
Number of extensions: 3671
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)