Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0121
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   3.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   3.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   4.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.3  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 720 NKLIYNEFHYHHQGHPI 670
           N    N+ H+HH GH I
Sbjct: 314 NAATNNQNHHHHAGHHI 330


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -3

Query: 396 IGIENTXDINRPLLSKYCCLENNAQFLAASSFIFSEKYTSKRSMI 262
           I  E    I +PL + Y C +  A  +   ++  +  +TS   +I
Sbjct: 164 ISFERYYAICKPLKAGYICTKTRASLICLLAWFIAALFTSPMLVI 208


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +2

Query: 98  WXNSLKLTSISDFVSXLXXIXWRDPWXIALISFHIIITVTCF 223
           W + +K+       +    I W  P+ +A ++F  I+T   F
Sbjct: 375 WNSLIKILKTVSNRNDKGDIFWFSPFLVANLAFVTIVTYETF 416


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +1

Query: 601 LNTVRTVILDLMKK 642
           LN ++T+ILD MKK
Sbjct: 54  LNELKTLILDAMKK 67


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = -3

Query: 396 IGIENTXDINRPLLSKYCCLENNAQFLAASSFIFSEKYTS 277
           I  E    I +PL + Y C +  A  +   ++  +  +TS
Sbjct: 164 ISFERYYAICKPLKAGYICTKTRASLICLLAWFIAALFTS 203


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 452 MTNLKKAQLRQRLKEMNSIREQQQ 523
           +TNL+  Q  Q   E+N +R+ Q+
Sbjct: 447 VTNLQVIQWMQNPTELNGLRDFQE 470


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 452 MTNLKKAQLRQRLKEMNSIREQQQ 523
           +TNL+  Q  Q   E+N +R+ Q+
Sbjct: 454 VTNLQVIQWMQNPTELNGLRDFQE 477


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +2

Query: 371 ISXVFSIPILLNCMIMVGSWLYQSTQIMTNLK 466
           I+ +F  PI++ C+I   + ++       N K
Sbjct: 249 INMLFGFPIIIGCLIQFNTIVFSFCYCYYNSK 280


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 229 QELWQFSSYTFYHTP 273
           QEL++FS++   H P
Sbjct: 304 QELYEFSNFVSQHLP 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,075
Number of Sequences: 336
Number of extensions: 3191
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)