Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0119
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA...    29   4.8  
AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB...    29   8.5  
AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA...    29   8.5  

>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
            protein.
          Length = 2112

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 198  AKKISGNALSMITVVPGSTDEL-YSGGGWCDGKNEMTASIHKNNTAYSAASSTFS 37
            A ++SGN  S  T  PG+T E   +      GK E T+   +N T ++  ++T S
Sbjct: 1810 ADQVSGNCSSGQTTTPGTTTEPGTTESTTSSGKPETTSKAPENTTTWAPETTTTS 1864


>AE014297-4119|ABI31211.1| 4685|Drosophila melanogaster CG3339-PB,
            isoform B protein.
          Length = 4685

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 430  KIYLRNFKKRNFNAAKATLKFIFVFK 507
            +IYL+N K+ N+   K  L++IF+++
Sbjct: 3221 RIYLQNEKRYNYTTPKTFLEYIFLYR 3246


>AE014297-4118|AAF56699.2| 4543|Drosophila melanogaster CG3339-PA,
            isoform A protein.
          Length = 4543

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 430  KIYLRNFKKRNFNAAKATLKFIFVFK 507
            +IYL+N K+ N+   K  L++IF+++
Sbjct: 3079 RIYLQNEKRYNYTTPKTFLEYIFLYR 3104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,762,868
Number of Sequences: 53049
Number of extensions: 628913
Number of successful extensions: 1397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)