Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0116
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 274 1e-74
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 267 2e-72
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 238 8e-64
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 227 2e-60
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 188 1e-48
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 92 1e-19
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 69 1e-12
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 51 2e-07
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 27 3.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.4
SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr... 26 7.8
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 274 bits (672), Expect = 1e-74
Identities = 146/246 (59%), Positives = 170/246 (69%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVG F + G T S + + GDAAKNQVAMNP+NT
Sbjct: 7 IDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNPHNT 64
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL K
Sbjct: 65 IFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMK 124
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
M+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 125 MRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLD 184
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
+ + + L + FEVK+T GDTH G R+VNHF+QE
Sbjct: 185 RSNQGESN-VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLG-GEDFDSRLVNHFIQE 242
Query: 801 FRRNSK 818
F+R +K
Sbjct: 243 FKRKNK 248
Score = 33.9 bits (74), Expect = 0.029
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 622 KKGTGERNVLIFDLGGGTF 678
+ GE NVLIFDLGGGTF
Sbjct: 185 RSNQGESNVLIFDLGGGTF 203
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 677 FDVSILTIEDGIF 715
FDVS+LTIE+GIF
Sbjct: 203 FDVSLLTIEEGIF 215
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 267 bits (654), Expect = 2e-72
Identities = 143/246 (58%), Positives = 167/246 (67%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVG F + G T S + + GDAAKNQVAMNP+NT
Sbjct: 7 IDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNPHNT 64
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL K
Sbjct: 65 IFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLK 124
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
M+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 125 MRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLD 184
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
+ T + L + FEVK+T GDTH G R+VNHF QE
Sbjct: 185 RSNQHETN-VLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLG-GEDFDSRLVNHFAQE 242
Query: 801 FRRNSK 818
F+R +K
Sbjct: 243 FKRKNK 248
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 238 bits (582), Expect = 8e-64
Identities = 132/246 (53%), Positives = 157/246 (63%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCV V++ G T S + V GDAAKNQ AMNP NT
Sbjct: 11 IDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLV--GDAAKNQAAMNPRNT 68
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLTK
Sbjct: 69 VFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLTK 128
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 129 MKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLD 188
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
K + K + L + FEV +T GDTH G +V HF+QE
Sbjct: 189 AKSD-KPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLG-GEDFDNALVEHFIQE 246
Query: 801 FRRNSK 818
F+R K
Sbjct: 247 FKRKQK 252
Score = 30.7 bits (66), Expect = 0.27
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 625 KGTGERNVLIFDLGGGTF 678
K +NVLIFDLGGGTF
Sbjct: 190 KSDKPKNVLIFDLGGGTF 207
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 227 bits (554), Expect = 2e-60
Identities = 122/245 (49%), Positives = 161/245 (65%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCV V ++G G T S + V G+AAKNQ NP NT
Sbjct: 40 IDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLV--GEAAKNQAPSNPENT 97
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
K + Y + + S+ + + FEV +T GDTH G R++N+ +
Sbjct: 218 KTDTEKHIVVYDLGGGTFDVSLLSIDNGV--FEVLATSGDTHLG-GEDFDNRVINYLART 274
Query: 801 FRRNS 815
+ R +
Sbjct: 275 YNRKN 279
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 188 bits (457), Expect = 1e-48
Identities = 109/250 (43%), Positives = 143/250 (57%)
Frame = +3
Query: 63 KHPQ*AIDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVA 242
K P IDLGTT SC+ + + G T SV+ + G +AK Q
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLV-GVSAKRQAV 107
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 422
+NP NT F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 108 INPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIG 164
Query: 423 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 602
+L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA
Sbjct: 165 GFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAA 224
Query: 603 IAYGLDKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMV 782
+AYGLDKK L +S L FEV+ST GDTH G + +V
Sbjct: 225 LAYGLDKKNDAIVAVFDLGGGTFDISI---LELNNGVFEVRSTNGDTHLG-GEDFDVALV 280
Query: 783 NHFVQEFRRN 812
H V+ F++N
Sbjct: 281 RHIVETFKKN 290
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 91.9 bits (218), Expect = 1e-19
Identities = 51/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = +3
Query: 216 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGE 392
G+AAK+ A N NT+ KRL GR ++D ++ + ++ G KV Y E
Sbjct: 53 GEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNE 112
Query: 393 DKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVL 572
+ F ++ + TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN L
Sbjct: 113 ETAFSNIQLIAAYFTKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPL 172
Query: 573 RIINEPTAAAIAYGLDK 623
R++N+ AAA+ YG+ K
Sbjct: 173 RLMNDNAAAALTYGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 68.5 bits (160), Expect = 1e-12
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
Frame = +3
Query: 216 GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGED 395
G A+ Q+ N +N++ + + L+G+ ++ T+ H+ V+ G+ K+ + ++
Sbjct: 72 GVQARGQLVRNADNSVTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDE 129
Query: 396 ------KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 557
K E S L ++ E+AE +LG V V++VP YF D+QR+A + A +
Sbjct: 130 ESDPKEKILTAHEASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEA 189
Query: 558 GLNVLRIINEPTAAAIA 608
GL VL++I++P A +A
Sbjct: 190 GLPVLQLIHDPAAVILA 206
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 50.8 bits (116), Expect = 2e-07
Identities = 46/187 (24%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Frame = +3
Query: 216 GDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-G 389
G A N P ++I + K L+ E VQ +P + + + +++
Sbjct: 71 GVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVIS 130
Query: 390 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 569
+++ + EE+ +M + AE + + + V+TVP +FN+ QR +A I +V
Sbjct: 131 DEENYSLEEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHV 190
Query: 570 LRIINEPTAAAIAYGLDKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHF 749
L +I++ A AI Y L + + T TY Y S S + ++SF+ T +
Sbjct: 191 LALIDDNVAVAIEYSLSRS--FSTDPTY---NIIYDSGSGSTSATVISFD---TVEGSSL 242
Query: 750 GKXXTLT 770
GK +T
Sbjct: 243 GKKQNIT 249
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -3
Query: 762 SSPSQSGCRRRWISPRKIPSSMVRMDTSKGTAAEVKDKYISFSSTLFCQDR---KQSQQQ 592
SS S+ R+ P K+P +++ + E SF STLF + + QQ
Sbjct: 175 SSSSEQHFRKVPALPSKLPPKPLKITANSSLGQETNSNSSSFQSTLFSLNTAPFSATSQQ 234
Query: 591 SVH 583
VH
Sbjct: 235 LVH 237
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 671 PPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQARD 552
P + K+ +F P F+ TVS+R + F DD E+ R+
Sbjct: 93 PGFKDKLDSFLQPARDFLHTVSDRLDNIF-DDDEDEHVRE 131
>SPBC17G9.03c |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 591
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 447 ETAEAYLG-KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623
E EA++ K + NA + F+ R + G + +II+E A+ YGL
Sbjct: 488 ERFEAFVATKEICNAYTELNDIFDQRARFEEQARQKAQGDDEAQIIDENFCTALEYGLPP 547
Query: 624 KGYW 635
G W
Sbjct: 548 TGGW 551
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,584,469
Number of Sequences: 5004
Number of extensions: 75112
Number of successful extensions: 228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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