Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0116
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    91   4e-20
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            27   0.54 

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 91.1 bits (216), Expect = 4e-20
 Identities = 42/47 (89%), Positives = 46/47 (97%)
 Frame = +3

Query: 483 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 623
           +AVITVPAYFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDK 47



 Score = 35.9 bits (79), Expect = 0.002
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 634 GERNVLIFDLGGGTF 678
           GERNVLIFDLGGGTF
Sbjct: 51  GERNVLIFDLGGGTF 65


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = +1

Query: 682  RVHPYHRRWYLSR*NPPXATPTLGRXXL*XFAWSTTLSRSSGGIPKXPRFQQKTL 846
            R+  Y   W L     P A   + R     F W ++ SR++  +P+  ++ QK L
Sbjct: 3191 RLFEYVDSWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTKDLPEIRKYLQKRL 3245


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 919,901
Number of Sequences: 2352
Number of extensions: 18797
Number of successful extensions: 40
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)