Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0116
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 290 1e-78
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 283 8e-77
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 253 1e-67
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 253 1e-67
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 248 5e-66
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 248 5e-66
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 244 5e-65
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 241 3e-64
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 184 9e-47
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 180 9e-46
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 149 2e-36
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 132 2e-31
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 75 6e-14
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 29 3.2
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 29 5.5
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 29 5.5
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 29 5.5
AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 29 5.5
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL023847-4|CAA19550.1| 349|Caenorhabditis elegans Hypothetical ... 28 9.6
AC199160-2|ABO33282.1| 222|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 290 bits (711), Expect = 1e-78
Identities = 155/253 (61%), Positives = 178/253 (70%), Gaps = 1/253 (0%)
Frame = +3
Query: 63 KHPQ*AIDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVA 242
KH IDLGTTYSCVGVF HG G T S + + GDAAKNQVA
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 419
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 420 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 599
SSMVL KMKETAEA+LG TV++AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAA
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
Query: 600 AIAYGLDKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRM 779
AIAYGLDKKG+ + + L + FEVKST GDTH G RM
Sbjct: 181 AIAYGLDKKGHGE-RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG-GEDFDNRM 238
Query: 780 VNHFVQEFRRNSK 818
VNHF EF+R K
Sbjct: 239 VNHFCAEFKRKHK 251
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 622 KKGTGERNVLIFDLGGGTF 678
KKG GERNVLIFDLGGGTF
Sbjct: 188 KKGHGERNVLIFDLGGGTF 206
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +2
Query: 677 FDVSILTIEDGIFRGEIHRRRHPLWEGXDFDXSHGQPLCPGVQEEFQXGLASNKKLL 847
FDVSILTIEDGIF + L G DFD C + + + LASN + L
Sbjct: 206 FDVSILTIEDGIFEVKSTAGDTHL-GGEDFDNRMVNHFCAEFKRKHKKDLASNPRAL 261
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 283 bits (695), Expect = 8e-77
Identities = 152/253 (60%), Positives = 176/253 (69%), Gaps = 1/253 (0%)
Frame = +3
Query: 63 KHPQ*AIDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVA 242
KH IDLGTTYSCVGVF HG G T S + + GDAAKNQVA
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVA 60
Query: 243 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 419
MNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 420 SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAA 599
SSMVL KMK+TAEA+L TV++AV+TVP YFNDSQRQATKDAG I+GLNVLRIINEPTAA
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIINEPTAA 180
Query: 600 AIAYGLDKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRM 779
AIAYGLDKKG+ + + L + FEVKST GDTH G RM
Sbjct: 181 AIAYGLDKKGHGE-RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG-GEDFDNRM 238
Query: 780 VNHFVQEFRRNSK 818
VNHF EF+R K
Sbjct: 239 VNHFCAEFKRKHK 251
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 622 KKGTGERNVLIFDLGGGTF 678
KKG GERNVLIFDLGGGTF
Sbjct: 188 KKGHGERNVLIFDLGGGTF 206
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +2
Query: 677 FDVSILTIEDGIFRGEIHRRRHPLWEGXDFDXSHGQPLCPGVQEEFQXGLASNKKLL 847
FDVSILTIEDGIF + L G DFD C + + + LASN + L
Sbjct: 206 FDVSILTIEDGIFEVKSTAGDTHL-GGEDFDNRMVNHFCAEFKRKHKKDLASNPRAL 261
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 253 bits (619), Expect = 1e-67
Identities = 139/246 (56%), Positives = 164/246 (66%), Gaps = 1/246 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVG++Q+G G T S + V GDAAK+Q A NP NT
Sbjct: 9 IDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLV--GDAAKDQAARNPENT 66
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+MVL K
Sbjct: 67 VFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVLQK 126
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLD
Sbjct: 127 MKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLD 186
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVS-FEVKSTXGDTHFGKXXTLTIRMVNHFVQ 797
K G K + L S FEVKST GDTH G RM+ HF+
Sbjct: 187 K-GIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLG-GEDFDQRMLQHFMN 244
Query: 798 EFRRNS 815
EF+R +
Sbjct: 245 EFKRKT 250
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 637 ERNVLIFDLGGGTF 678
E+NVLIFDLGGGTF
Sbjct: 192 EKNVLIFDLGGGTF 205
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 253 bits (619), Expect = 1e-67
Identities = 139/246 (56%), Positives = 164/246 (66%), Gaps = 1/246 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVG++Q+G G T S + V GDAAK+Q A NP NT
Sbjct: 9 IDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLV--GDAAKDQAARNPENT 66
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+MVL K
Sbjct: 67 VFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAMVLQK 126
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLD
Sbjct: 127 MKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLD 186
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVS-FEVKSTXGDTHFGKXXTLTIRMVNHFVQ 797
K G K + L S FEVKST GDTH G RM+ HF+
Sbjct: 187 K-GIQDEKNVLIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLG-GEDFDQRMLQHFMN 244
Query: 798 EFRRNS 815
EF+R +
Sbjct: 245 EFKRKT 250
Score = 32.3 bits (70), Expect = 0.45
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 637 ERNVLIFDLGGGTF 678
E+NVLIFDLGGGTF
Sbjct: 192 EKNVLIFDLGGGTF 205
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 248 bits (606), Expect = 5e-66
Identities = 130/245 (53%), Positives = 167/245 (68%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVGV+++G G T S + GDAAKNQ+ +NP NT
Sbjct: 38 IDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENT 97
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL K
Sbjct: 98 IFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVK 157
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLD
Sbjct: 158 MKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLD 217
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
KK R + + + ++ + + FEV +T GDTH G R++ +F++
Sbjct: 218 KKDGERNILVFDLGGGTFDVSMLTIDNGV--FEVLATNGDTHLG-GEDFDQRVMEYFIKL 274
Query: 801 FRRNS 815
+++ S
Sbjct: 275 YKKKS 279
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 248 bits (606), Expect = 5e-66
Identities = 130/245 (53%), Positives = 167/245 (68%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVGV+++G G T S + GDAAKNQ+ +NP NT
Sbjct: 38 IDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENT 97
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V ++K F PEEVS+MVL K
Sbjct: 98 IFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVK 157
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLD
Sbjct: 158 MKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLD 217
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
KK R + + + ++ + + FEV +T GDTH G R++ +F++
Sbjct: 218 KKDGERNILVFDLGGGTFDVSMLTIDNGV--FEVLATNGDTHLG-GEDFDQRVMEYFIKL 274
Query: 801 FRRNS 815
+++ S
Sbjct: 275 YKKKS 279
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 244 bits (598), Expect = 5e-65
Identities = 135/246 (54%), Positives = 163/246 (66%), Gaps = 1/246 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVG++Q+G G T S + V GDAAK+Q A NP NT
Sbjct: 9 IDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLV--GDAAKDQAARNPENT 66
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+MVL K
Sbjct: 67 VFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAMVLQK 126
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MKETAEA LG +V++AVITVPAYFNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLD
Sbjct: 127 MKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLD 186
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVS-FEVKSTXGDTHFGKXXTLTIRMVNHFVQ 797
KG K + L S FEVKST GDTH G R++ HF+
Sbjct: 187 -KGITDEKNILIFDLGGGTFDVSILSIAEGSIFEVKSTAGDTHLG-GEDFDSRVLQHFMT 244
Query: 798 EFRRNS 815
EF+R +
Sbjct: 245 EFKRKT 250
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1
Query: 631 TGERNVLIFDLGGGTF 678
T E+N+LIFDLGGGTF
Sbjct: 190 TDEKNILIFDLGGGTF 205
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 241 bits (591), Expect = 3e-64
Identities = 128/245 (52%), Positives = 165/245 (67%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTTYSCVGVF++G G T S + GDAAKNQ+ +NP NT
Sbjct: 35 IDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENT 94
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
IFDAKRLIGR + + TVQ D+KHWPF++V KP ++V E K F PEEVS+MVLTK
Sbjct: 95 IFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVLTK 154
Query: 441 MKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 620
MK+ AE+YLG V+NAV+TVPAYFND+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYGLD
Sbjct: 155 MKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLD 214
Query: 621 KKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQE 800
KK R + + + ++ S + FEV +T GDTH G R++ +F++
Sbjct: 215 KKDGERNILVFDLGGGTFDVSLLTIDSGV--FEVLATNGDTHLG-GEDFDQRVMEYFIKL 271
Query: 801 FRRNS 815
+++ S
Sbjct: 272 YKKKS 276
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 184 bits (447), Expect = 9e-47
Identities = 112/244 (45%), Positives = 141/244 (57%), Gaps = 1/244 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTT SCV + + G T S + + G AK Q N NT
Sbjct: 36 IDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLV-GAPAKRQAVTNSANT 94
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + VL
Sbjct: 95 LFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFVLM 150
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
KMKETAE+YLG TV NAV+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGL
Sbjct: 151 KMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGL 210
Query: 618 DKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQ 797
DK + Y + L + FEVKST GDT G +V+H V
Sbjct: 211 DKDAGDKIIAVYDLGGGTF--DVSILEIQKGVFEVKSTNGDTFLG-GEDFDHALVHHLVG 267
Query: 798 EFRR 809
EF++
Sbjct: 268 EFKK 271
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 180 bits (439), Expect = 9e-46
Identities = 111/244 (45%), Positives = 140/244 (57%), Gaps = 1/244 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTT SCV + + G T S + + G AK Q N NT
Sbjct: 36 IDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLV-GAPAKRQAVTNSANT 94
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
+F KRLIGR++ED VQ D+K P+++V + G ++ + K + P +V + VL
Sbjct: 95 LFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFVLM 150
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
KMKETAE+YLG TV N V+TVPAYFNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGL
Sbjct: 151 KMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGL 210
Query: 618 DKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFVQ 797
DK + Y + L + FEVKST GDT G +V+H V
Sbjct: 211 DKDAGDKIIAVYDLGGGTF--DVSILEIQKGVFEVKSTNGDTFLG-GEDFDHALVHHLVG 267
Query: 798 EFRR 809
EF++
Sbjct: 268 EFKK 271
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 149 bits (362), Expect = 2e-36
Identities = 96/244 (39%), Positives = 136/244 (55%), Gaps = 2/244 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTT+SCV +Q+G G T SVL V + G AK+ + N+
Sbjct: 5 IDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLA-VGEDGDLLIGQHAKDVIG-KATNS 62
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
+FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
+K AE LG V++AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY L
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSL 182
Query: 618 DKKGYWRTK-CTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFV 794
+ R Y + ++ ++ VK+ GDTH G I M+ +
Sbjct: 183 KGQRLSRRNILIYDLGGGTFDVAAVNVDGPRIT--VKAKGGDTHLGGQDIDNIIMIK-ML 239
Query: 795 QEFR 806
+EF+
Sbjct: 240 EEFK 243
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 149 bits (362), Expect = 2e-36
Identities = 96/244 (39%), Positives = 136/244 (55%), Gaps = 2/244 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGTT+SCV +Q+G G T SVL V + G AK+ + N+
Sbjct: 5 IDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLA-VGEDGDLLIGQHAKDVIG-KATNS 62
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
+FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++L
Sbjct: 63 LFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLILR 122
Query: 438 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
+K AE LG V++AVITVPAYFN +QR+AT++A I+GL VLRI+NEPTAAAIAY L
Sbjct: 123 CLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSL 182
Query: 618 DKKGYWRTK-CTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGKXXTLTIRMVNHFV 794
+ R Y + ++ ++ VK+ GDTH G I M+ +
Sbjct: 183 KGQRLSRRNILIYDLGGGTFDVAAVNVDGPRIT--VKAKGGDTHLGGQDIDNIIMIK-ML 239
Query: 795 QEFR 806
+EF+
Sbjct: 240 EEFK 243
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 132 bits (320), Expect = 2e-31
Identities = 77/187 (41%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPS--VSSGDAAKNQVAMNPN 254
IDLGTTYS +G++ H G+ P G SV V P+ V G A Q NP
Sbjct: 38 IDLGTTYSSIGIY-HAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPK 96
Query: 255 NTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 425
TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+ S
Sbjct: 97 RTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGS 156
Query: 426 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 605
+++ +K A +LG T+ VI+ PA FN+ QR T A I+ + V R+I+EPTAAA+
Sbjct: 157 LIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAAL 216
Query: 606 AYGLDKK 626
AYGL KK
Sbjct: 217 AYGLHKK 223
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 109 bits (261), Expect = 3e-24
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Frame = +3
Query: 186 CVHXTPSVSS-GDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGG 359
CV P S G AA+ V N NT+ + K LIGRKF D Q + P +VV
Sbjct: 38 CVSFGPKDRSMGVAARQAVTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPND 97
Query: 360 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLG--KTVQNAVITVPAYFNDSQRQA 533
++V+Y GE TF PE+V + +LTK++ E+ L K V + V+ VP+YF D QR+A
Sbjct: 98 DIGVQVSYLGEPHTFTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRA 157
Query: 534 TKDAGTISGLNVLRIINEPTAAAIAYGLDKK 626
A +GLN LRI+NE TA A+AYG+ K+
Sbjct: 158 VLSAIQYAGLNSLRIVNETTAIALAYGIYKQ 188
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 74.9 bits (176), Expect = 6e-14
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +3
Query: 219 DAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGED 395
+AA + +P ++ +I RK D K +PF D + + YK E+
Sbjct: 60 EAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EE 118
Query: 396 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 575
K + E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+GLN+L+
Sbjct: 119 K-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQ 177
Query: 576 IINEPTAAAIAYGLDKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGK 755
++N+ +AAA+ YG+ ++ K T++ Y + +V + ++ST D GK
Sbjct: 178 LLNDGSAAALNYGVFRRKEITEKPTHM---LIYDMGAVKTTATIVQYVLESTRKD---GK 231
Query: 756 XXTLTIRMV 782
T+R V
Sbjct: 232 DKQPTLRTV 240
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 74.9 bits (176), Expect = 6e-14
Identities = 56/189 (29%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +3
Query: 219 DAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGED 395
+AA + +P ++ +I RK D K +PF D + + YK E+
Sbjct: 76 EAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EE 134
Query: 396 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLR 575
K + E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+GLN+L+
Sbjct: 135 K-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAGLNLLQ 193
Query: 576 IINEPTAAAIAYGLDKKGYWRTKCTYL*PRRRYLSTCPSLPSKMVSFEVKSTXGDTHFGK 755
++N+ +AAA+ YG+ ++ K T++ Y + +V + ++ST D GK
Sbjct: 194 LLNDGSAAALNYGVFRRKEITEKPTHM---LIYDMGAVKTTATIVQYVLESTRKD---GK 247
Query: 756 XXTLTIRMV 782
T+R V
Sbjct: 248 DKQPTLRTV 256
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 69.7 bits (163), Expect = 2e-12
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Frame = +3
Query: 81 IDLGTTYSCVGVFQHG*GGDHRQRPGXTGTTSVLCCVHXTPSVSSGDAAKNQVAMNPNNT 260
IDLGT + +G+ + G D T + + + DAA P+
Sbjct: 29 IDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFA-DAAIGMQVRYPHLV 87
Query: 261 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 440
L+G+ + + + + F V D K + +K +++ E +++M+L
Sbjct: 88 HGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMILAN 147
Query: 441 MKETAEAYL-GKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 617
K+ E Y +++ VITVP YF ++R A + A ++GL VL++IN+ TAAA+++G+
Sbjct: 148 AKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGLTVLQLINDGTAAALSHGI 207
Query: 618 DKK 626
++
Sbjct: 208 FRR 210
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -2
Query: 277 RLASNIVLLGFIATWFLAASPDETLG 200
R ++LLGFI TW LA +E LG
Sbjct: 197 RTTGVLILLGFIETWILAFITNEQLG 222
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 692 GWTRRKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQA 558
GWTRR V R I FR ++ + N +++R I+ SE+ QA
Sbjct: 1476 GWTRRWVIVRRPYILLFRDDRDLVIRGIINLANAR-IEHSEDQQA 1519
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 692 GWTRRKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQA 558
GWTRR V R I FR ++ + N +++R I+ SE+ QA
Sbjct: 1520 GWTRRWVIVRRPYILLFRDDRDLVIRGIINLANAR-IEHSEDQQA 1563
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -1
Query: 692 GWTRRKVPPPRSKISTFRSPVPFFVKTVSNRSSSRFIDDSENVQA 558
GWTRR V R I FR ++ + N +++R I+ SE+ QA
Sbjct: 1476 GWTRRWVIVRRPYILLFRDDRDLVIRGIINLANAR-IEHSEDQQA 1519
>AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd
related) protein18 protein.
Length = 445
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -2
Query: 136 PPYPCWKTPTQEYVV-PRSIAY 74
PP PC++ PTQ Y P S+ Y
Sbjct: 52 PPMPCYQQPTQNYYTQPPSVIY 73
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +3
Query: 258 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 437
T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260
Query: 438 KMKETAEAYLGKTVQN 485
KE+++ K ++N
Sbjct: 261 IQKESSQLRKRKEIEN 276
>AL023847-4|CAA19550.1| 349|Caenorhabditis elegans Hypothetical
protein Y57A10C.8 protein.
Length = 349
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 92 TQIDCLLRVLLPFCIFNXVLVTCXLKQ 12
T + CL+ +L FCI N ++TC L++
Sbjct: 36 TDVCCLVAAVLSFCI-NFFIITCFLRK 61
>AC199160-2|ABO33282.1| 222|Caenorhabditis elegans Hypothetical
protein CE7X_3.2 protein.
Length = 222
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +3
Query: 537 KDAGTISGLNVLRIINEPTAAAIAYGLD--KKGYWRTKCTYL*PRRRYLSTCPSLPSK 704
++A S L++L + PT + + + K+G+W KCT RRR LS L K
Sbjct: 9 QEASNPSCLHMLLACHRPTISRALFEEEGFKEGWWCAKCTKE-DRRRQLSEAKELRQK 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,265,176
Number of Sequences: 27780
Number of extensions: 444530
Number of successful extensions: 1337
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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