Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0115
(575 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 155 8e-38
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 155 8e-38
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 155 8e-38
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 155 8e-38
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 155 8e-38
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 155 8e-38
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 155 8e-38
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 155 8e-38
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 155 8e-38
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 155 1e-37
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 155 1e-37
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 155 1e-37
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 155 1e-37
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 155 1e-37
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 155 1e-37
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 155 1e-37
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 155 1e-37
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 154 2e-37
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 154 2e-37
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 150 3e-36
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 150 3e-36
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 150 3e-36
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 146 4e-35
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 90 6e-18
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 62 1e-09
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 62 1e-09
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 62 1e-09
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 62 1e-09
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 62 1e-09
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 62 1e-09
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 62 1e-09
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 62 1e-09
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 62 1e-09
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 60 7e-09
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 60 7e-09
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 60 7e-09
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 60 7e-09
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 2.9
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 2.9
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 2.9
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 2.9
AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy ch... 31 2.9
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 2.9
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 2.9
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 3.8
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 3.8
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 3.8
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 3.8
J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type... 30 6.7
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 216 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 252
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 155 bits (377), Expect = 8e-38
Identities = 74/98 (75%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 79 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 115
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 113 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 147
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 111 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 145
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 154 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 188
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 155 bits (375), Expect = 1e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGAEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 154 bits (374), Expect = 2e-37
Identities = 74/97 (76%), Positives = 82/97 (84%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG EAA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 114 VEGEKGEEAANVTGPGGVPVQGSKYAAD--RNHYRRY 148
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 154 bits (374), Expect = 2e-37
Identities = 73/98 (74%), Positives = 82/98 (83%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYF 441
V GEKG EAA VTGP G PV+ S YAAD+RR Y R Y+
Sbjct: 146 VEGEKGAEAANVTGPDGVPVEGSRYAADRRR-YRRGYY 182
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 150 bits (364), Expect = 3e-36
Identities = 71/99 (71%), Positives = 81/99 (81%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYFP 444
V GEKG EA VTGPGG PVK S YA ++R+ R++ P
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIP 185
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 150 bits (364), Expect = 3e-36
Identities = 71/99 (71%), Positives = 81/99 (81%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYFP 444
V GEKG EA VTGPGG PVK S YA ++R+ R++ P
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIP 185
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 150 bits (364), Expect = 3e-36
Identities = 71/99 (71%), Positives = 81/99 (81%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQYFP 444
V GEKG EA VTGPGG PVK S YA ++R+ R++ P
Sbjct: 149 VEGEKGAEATNVTGPGGVPVKGSRYAPNRRKS--RRFIP 185
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 146 bits (355), Expect = 4e-35
Identities = 70/97 (72%), Positives = 80/97 (82%)
Frame = +1
Query: 148 VIAXKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAV 327
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 328 VAGEKGFEAAGVTGPGGEPVKXSPYAADKRRGYHRQY 438
V GEKG +AA VTGPGG PV+ S YAAD R ++R+Y
Sbjct: 110 VEGEKGAKAANVTGPGGVPVQGSKYAAD--RNHYRRY 144
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 89.8 bits (213), Expect = 6e-18
Identities = 44/69 (63%), Positives = 52/69 (75%)
Frame = +1
Query: 238 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKXSPYAADKR 417
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVK S YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 418 RGYHRQYFP 444
+ R++ P
Sbjct: 83 KS--RRFIP 89
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 64 FKKSSKGLESIRVTGPGGSP 83
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 62.1 bits (144), Expect = 1e-09
Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 325 VVAGEKGFEAAGVTGPGGEP 384
KG E+ VTGPGG P
Sbjct: 87 FKKSSKGLESIRVTGPGGSP 106
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 59.7 bits (138), Expect = 7e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 325 VVAGEKGFEAAGVTGPGG 378
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 59.7 bits (138), Expect = 7e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 325 VVAGEKGFEAAGVTGPGG 378
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 59.7 bits (138), Expect = 7e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 325 VVAGEKGFEAAGVTGPGG 378
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 59.7 bits (138), Expect = 7e-09
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Frame = +1
Query: 166 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFA 324
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKLHM----EGFRSLKEGEAVEFT 96
Query: 325 VVAGEKGFEAAGVTGPGG 378
KG E+ VTGPGG
Sbjct: 97 FKKSAKGLESIRVTGPGG 114
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AF417846-1|AAM46639.1| 143|Homo sapiens immunoglobulin heavy chain
protein.
Length = 143
Score = 31.1 bits (67), Expect = 2.9
Identities = 21/48 (43%), Positives = 22/48 (45%)
Frame = +2
Query: 194 RVDMVSSTGMTPRKMCLCIRLPSPVTTHVRLCARSATERRWSLPWLPG 337
RV M S T +T M L L S T V CAR R W PW PG
Sbjct: 86 RVAMTSDTSVTTAYMELT-SLTSDDTA-VYFCARGDVNRNWLDPWGPG 131
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 31.1 bits (67), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 169 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 261
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>J00112-1|AAA52291.1| 60|Homo sapiens pro-alpha-1 collagen type 1
protein.
Length = 60
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +1
Query: 334 GEKGFEAAGVTGPGGEPVKXSPYAADKRRG 423
GE+GF G GP GEP K P A RG
Sbjct: 4 GERGFP--GPLGPSGEPGKQGPSGASGERG 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,020,616
Number of Sequences: 237096
Number of extensions: 1109803
Number of successful extensions: 3233
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3220
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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