Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0112
(722 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030618-1|AAH30618.1| 589|Homo sapiens hypothetical protein LO... 190 3e-48
AK026315-1|BAB15442.1| 506|Homo sapiens protein ( Homo sapiens ... 101 3e-21
BC063561-1|AAH63561.1| 552|Homo sapiens hypothetical protein FL... 98 3e-20
BC000909-1|AAH00909.2| 223|Homo sapiens FLJ22662 protein protein. 98 3e-20
AK130224-1|BAC85306.1| 200|Homo sapiens protein ( Homo sapiens ... 32 2.4
AK092594-1|BAC03923.1| 266|Homo sapiens protein ( Homo sapiens ... 32 2.4
D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein. 30 9.6
BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.6
BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein. 30 9.6
AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage... 30 9.6
AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.6
AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.6
AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage ... 30 9.6
AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein. 30 9.6
AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila... 30 9.6
>BC030618-1|AAH30618.1| 589|Homo sapiens hypothetical protein
LOC196463 protein.
Length = 589
Score = 190 bits (464), Expect = 3e-48
Identities = 93/205 (45%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Frame = +1
Query: 10 GSVRPG--LLWVVEQLPGYTEAADITEELKQTSYFPSYNIAYFPSVFNLSGGNERVNTYG 183
G PG +L ++EQ+PG AD T EL Q +Y+ SYNI F +VFN SG V YG
Sbjct: 389 GGPSPGSRVLTILEQIPGMVVVADKTSELYQKTYWASYNIPSFETVFNASGLQALVAQYG 448
Query: 184 DWFGYHTNPRAKIFKQKQSEIHNLRDMYRTMRYNDYRHDPLSRCASCXXXXXXXXXXXXR 363
DWF Y +PRA+IF++ QS + ++ M R MRYND+ HDPLS C +C R
Sbjct: 449 DWFSYDGSPRAQIFRRNQSLVQDMDSMVRLMRYNDFLHDPLSLCKACNPQPNGENAISAR 508
Query: 364 NDLNPANGTYPFRALGHRSHGATDAKITSSLLXKTYQFIAVSSPTYNLSRGVPPFVWSKF 543
+DLNPANG+YPF+AL RSHG D K+TS L + +A S PT++ VPPF WS
Sbjct: 509 SDLNPANGSYPFKALRQRSHGGIDVKVTSMSLARILSLLAASGPTWD---QVPPFQWSTS 565
Query: 544 DMGPQISHVGHPDVWMFPPLLHRWE 618
+ H+G PD+W F P+ W+
Sbjct: 566 PFS-GLLHMGQPDLWKFAPVKVSWD 589
>AK026315-1|BAB15442.1| 506|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22662 fis, clone HSI08080. ).
Length = 506
Score = 101 bits (241), Expect = 3e-21
Identities = 65/198 (32%), Positives = 98/198 (49%)
Frame = +1
Query: 1 KMKGSVRPGLLWVVEQLPGYTEAADITEELKQTSYFPSYNIAYFPSVFNLSGGNERVNTY 180
K+ S+ G L++VEQ+P Y E ++ T+ L++ Y+PSYN+ + ++N SG V
Sbjct: 317 KLNHSLDKGTLYIVEQIPTYVEYSEQTDVLRK-GYWPSYNVPFHEKIYNWSGYPLLVQKL 375
Query: 181 GDWFGYHTNPRAKIFKQKQSEIHNLRDMYRTMRYNDYRHDPLSRCASCXXXXXXXXXXXX 360
G + Y PRAKIF++ Q ++ + M MRYN+Y+ DP SR C
Sbjct: 376 GLDYSYDLAPRAKIFRRDQGKVTDTASMKYIMRYNNYKKDPYSRGDPC-------NTICC 428
Query: 361 RNDLNPANGTYPFRALGHRSHGATDAKITSSLLXKTYQFIAVSSPTYNLSRGVPPFVWSK 540
R DLN N + G D K+ L Y A+S PT + G+P F W +
Sbjct: 429 REDLNSPNPS---------PGGCYDTKVADIYLASQYTSYAISGPT--VQGGLPVFRWDR 477
Query: 541 FDMGPQISHVGHPDVWMF 594
F+ + H G P+V+ F
Sbjct: 478 FN---KTLHQGMPEVYNF 492
>BC063561-1|AAH63561.1| 552|Homo sapiens hypothetical protein
FLJ22662 protein.
Length = 552
Score = 97.9 bits (233), Expect = 3e-20
Identities = 64/198 (32%), Positives = 97/198 (48%)
Frame = +1
Query: 1 KMKGSVRPGLLWVVEQLPGYTEAADITEELKQTSYFPSYNIAYFPSVFNLSGGNERVNTY 180
K+ S+ G L++VEQ+P Y E ++ T+ L++ Y+PSYN+ + ++N SG V
Sbjct: 363 KLNHSLDKGTLYIVEQIPTYVEYSEQTDVLRK-GYWPSYNVPFHEKIYNWSGYPLLVQKL 421
Query: 181 GDWFGYHTNPRAKIFKQKQSEIHNLRDMYRTMRYNDYRHDPLSRCASCXXXXXXXXXXXX 360
G + Y PRAKIF++ Q ++ + M MRYN+Y+ DP SR C
Sbjct: 422 GLDYSYDLAPRAKIFRRDQGKVTDTASMKYIMRYNNYKKDPYSRGDPC-------NTICC 474
Query: 361 RNDLNPANGTYPFRALGHRSHGATDAKITSSLLXKTYQFIAVSSPTYNLSRGVPPFVWSK 540
R DLN N + G D K+ L Y A+S PT + G+P F W +
Sbjct: 475 REDLNSPNPS---------PGGCYDTKVADIYLASQYTSYAISGPT--VQGGLPVFRWDR 523
Query: 541 FDMGPQISHVGHPDVWMF 594
F+ + H G +V+ F
Sbjct: 524 FN---KTLHQGMAEVYNF 538
>BC000909-1|AAH00909.2| 223|Homo sapiens FLJ22662 protein protein.
Length = 223
Score = 97.9 bits (233), Expect = 3e-20
Identities = 64/198 (32%), Positives = 97/198 (48%)
Frame = +1
Query: 1 KMKGSVRPGLLWVVEQLPGYTEAADITEELKQTSYFPSYNIAYFPSVFNLSGGNERVNTY 180
K+ S+ G L++VEQ+P Y E ++ T+ L++ Y+PSYN+ + ++N SG V
Sbjct: 34 KLNHSLDKGTLYIVEQIPTYVEYSEQTDVLRK-GYWPSYNVPFHEKIYNWSGYPLLVQKL 92
Query: 181 GDWFGYHTNPRAKIFKQKQSEIHNLRDMYRTMRYNDYRHDPLSRCASCXXXXXXXXXXXX 360
G + Y PRAKIF++ Q ++ + M MRYN+Y+ DP SR C
Sbjct: 93 GLDYSYDLAPRAKIFRRDQGKVTDTASMKYIMRYNNYKKDPYSRGDPC-------NTICC 145
Query: 361 RNDLNPANGTYPFRALGHRSHGATDAKITSSLLXKTYQFIAVSSPTYNLSRGVPPFVWSK 540
R DLN N + G D K+ L Y A+S PT + G+P F W +
Sbjct: 146 REDLNSPNPS---------PGGCYDTKVADIYLASQYTSYAISGPT--VQGGLPVFRWDR 194
Query: 541 FDMGPQISHVGHPDVWMF 594
F+ + H G +V+ F
Sbjct: 195 FN---KTLHQGMAEVYNF 209
>AK130224-1|BAC85306.1| 200|Homo sapiens protein ( Homo sapiens
cDNA FLJ26714 fis, clone PNC01043. ).
Length = 200
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Frame = +2
Query: 404 PWDIAVTEPPTRRSRARCSXRLTSS*PCRAPPTTCPGGCHPSFGVSS---TWVRRYLTWA 574
P + P R+ + S P APP PG H S +S +WV + +W
Sbjct: 34 PAAVGAAGPSGHRAPPSFARGAHPSVPSAAPPPGSPGHMHTSVFTASVVFSWVPQVSSWG 93
Query: 575 TPMCGCSHPCSTAGSGDRLTHSQQQRAAXILNIHTC 682
MC ++ G Q A + HTC
Sbjct: 94 GFMCQSGSLQASLARGSAGPFQMSQPAVCLHIQHTC 129
>AK092594-1|BAC03923.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ35275 fis, clone PROST2006282, weakly similar to
TRANSLATION INITIATION FACTOR IF-2. ).
Length = 266
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 482 PCRAPPTTCPGGCHPSFGVSSTWVRRYLTWATPMCGCSHPCSTAGS 619
PC A P C G GVS T +L+W++ CG S A +
Sbjct: 68 PCGAAPGGCASGGCGVMGVSLTVSLSFLSWSSSRCGVPARSSAASA 113
>D79992-1|BAA11487.2| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 746 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 792
>BX248307-2|CAM25929.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>BA000025-70|BAB63322.1| 2090|Homo sapiens KIAA0170 protein.
Length = 2090
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>AL845353-22|CAI41891.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>AL662848-3|CAI17440.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>AL662797-7|CAI18195.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>AB202097-1|BAE78617.1| 2089|Homo sapiens mediator of DNA damage
checkpoint 1 protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>AB103605-1|BAF31266.1| 2089|Homo sapiens KIAA0170 protein protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
>AB088099-1|BAC54931.1| 2089|Homo sapiens homologue to Drosophila
photoreceptor protein calphotin protein.
Length = 2089
Score = 29.9 bits (64), Expect = 9.6
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +2
Query: 401 EPWDIAVTEPPTRRSRARCSXR-----LTSS*PCRAPPTTCPGGCHP 526
EPW++ T+P R + L + PC +PP PG HP
Sbjct: 745 EPWEVLATQPFCLRESEDSETQPFDTHLEAYGPCLSPPRAIPGDQHP 791
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,264,887
Number of Sequences: 237096
Number of extensions: 2407552
Number of successful extensions: 7678
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7651
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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