Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0111
(454 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 66 2e-12
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 48 9e-07
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.062
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 28 0.77
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 27 1.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 4.1
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 25 5.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.4
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 25 7.2
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 24 9.5
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 66.5 bits (155), Expect = 2e-12
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Frame = +3
Query: 12 VDNHGDXDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGHWDS 191
VDN+G IV + +G L + P G+ + +V G V+ + P++++ GHW+
Sbjct: 1112 VDNYGQMHIVNHS---SGINCVLDFKPRGWRGTNAH-EVKGSVQSTDDTPKWMVNGHWND 1167
Query: 192 RVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLN----EPEPGVA 359
++ G + WQ PP + +N T A LN + +P +
Sbjct: 1168 KIFGQQ-----------PNGNKILLWQNHERPP---RPFNLTPFAISLNALTPQLKPWLP 1213
Query: 360 PTDSRLRPDQRLMXEGCWDEANTEKLRLEE 449
PTD+RLRPDQR M G +D A +EK RLEE
Sbjct: 1214 PTDTRLRPDQRAMENGQYDLAASEKNRLEE 1243
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 47.6 bits (108), Expect = 9e-07
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Frame = +3
Query: 9 WVDNHGDXDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGHWD 188
+V+ + +IV + TG A +++ G FS ++ + V++ LQG W
Sbjct: 744 YVEPYDHMEIVDET---TGDKAVIRFKSGGMFSGRSEDVLVTVIRSNGEEDPKCLQGKWT 800
Query: 189 SRVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNE----PEPGV 356
S ++ + + + G V P D TV AAQ+NE + +
Sbjct: 801 SHLDFVNTDEGNVIERIWEVGPLVDK------PEDH---CGMTVFAAQMNEITDLEKDKL 851
Query: 357 APTDSRLRPDQRLMXEGCWDEANTEKLRLEE 449
PTD+RLRPDQR D A KL LE+
Sbjct: 852 PPTDTRLRPDQRYRENNDLDHAEPLKLELEQ 882
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.5 bits (68), Expect = 0.062
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -1
Query: 421 ASSQQPSSMRRWSGRSRESVGATPGSGSLSCAASTVKLYHLSESGGAATRCHAVTNLPVL 242
ASS SS S + + A+P S SL+ +++T S + ++ ++T+ +
Sbjct: 81 ASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLA 140
Query: 241 QTELSADVLVTGAT--STRLSQ*PCSTYLGTPLGSLTT 134
+ +++ L + +T S+ S ST TP S T+
Sbjct: 141 SSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATS 178
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 27.9 bits (59), Expect = 0.77
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 216 STSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNEPEPGVAPTDSRL 377
S+S +S+ G +W+++ + ++ +L E P V P DSRL
Sbjct: 618 SSSLPSSLLNRGSSTHSWEKLTNASTEEVMLPLDMVVNELLEKSPKVFPEDSRL 671
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 27.5 bits (58), Expect = 1.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 358 ATPGSGSLSCAASTVKLYHLSESGGAATRCHAVTNLPVLQTELS 227
A P + S + A TV LYH G A +LP+ + L+
Sbjct: 563 AAPFTASSAYLAGTVLLYHYITRGSEVQASKAAVHLPIAKRHLA 606
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 4.1
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = -1
Query: 418 SSQQPSSMRRWSGRSRESVGATPGSGSLSCAASTVKLYHLSESGGAATRCHAVTN 254
SS SS S S G+T SGS ST + H S S +T AVT+
Sbjct: 533 SSSSSSSRSGSSSSSSSRSGSTSSSGSSHTITSTSQSVHTSGS-STSTSSVAVTS 586
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 150 NGVPRYVLQGHWDSRVEVAPVTSTSADNSVC 242
+G+ Y L WD+ E + + +ADN+VC
Sbjct: 218 SGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.0 bits (52), Expect = 5.4
Identities = 22/98 (22%), Positives = 38/98 (38%)
Frame = -1
Query: 421 ASSQQPSSMRRWSGRSRESVGATPGSGSLSCAASTVKLYHLSESGGAATRCHAVTNLPVL 242
+S PS+ +G S S+ SGS + + +T S S AA + V
Sbjct: 959 SSEVDPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSSIAAASVTGSSTSSVA 1018
Query: 241 QTELSADVLVTGATSTRLSQ*PCSTYLGTPLGSLTTPV 128
++ + AT++ S + + GS T+ V
Sbjct: 1019 TASVTDSSTSSVATASATDSSTSSIAVASVTGSSTSSV 1056
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 24.6 bits (51), Expect = 7.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 183 WDSRVEVAPVTSTSADNSVCKTGKFVTAWQR 275
W VE PVT+ ++ + KFV W +
Sbjct: 494 WSLEVEKQPVTTKLKVPNLVRNDKFVRLWHK 524
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 24.2 bits (50), Expect = 9.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 163 LGTPLGSLTTPVTFRCVSLLK 101
+GTP+ +T V RC+S LK
Sbjct: 277 MGTPVSLITEAVFARCLSSLK 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,321,864
Number of Sequences: 5004
Number of extensions: 24073
Number of successful extensions: 71
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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