Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0111
(454 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0877 + 21230447-21230815,21231855-21232208,21232417-212325... 75 3e-14
08_01_0359 + 3152483-3152857,3154493-3154855,3155133-3155211,315... 70 8e-13
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 67 5e-12
12_01_1055 - 10861665-10861829,10862827-10863171,10864374-108646... 58 4e-09
03_02_0528 + 9189215-9189330,9190111-9190204,9190654-9190743,919... 53 9e-08
11_04_0183 + 14642037-14642069,14642099-14642220,14642791-146429... 29 1.3
11_01_0558 - 4396750-4396986,4397699-4398050,4398266-4398504,439... 29 2.3
09_02_0612 + 11239675-11240140,11240587-11240687 28 3.1
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 28 3.1
11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834 28 4.0
04_04_1303 - 32487174-32487871,32488583-32489123 28 4.0
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 27 5.3
03_03_0115 + 14568904-14569152,14569561-14569797,14569913-145701... 27 5.3
02_05_0040 + 25341418-25341810 27 5.3
02_01_0490 + 3541056-3542276 27 5.3
11_06_0377 - 22900042-22900452,22900527-22902236 27 7.1
08_02_0085 + 12108474-12108552,12108656-12108759,12109726-121099... 27 7.1
04_04_0044 - 22333376-22333898,22335509-22336227 27 7.1
03_03_0200 - 15396187-15396246,15396345-15396566,15396645-153971... 27 7.1
03_01_0220 + 1745719-1745806,1745893-1746062,1746170-1746359,174... 27 7.1
02_01_0504 - 3673312-3673617 27 7.1
04_03_0147 - 11853940-11854128,11854933-11855013,11855501-118555... 27 9.3
03_06_0358 + 33366265-33366447,33367371-33367468,33367910-333689... 27 9.3
01_01_0610 + 4533141-4533310,4534889-4535075,4535232-4535323,453... 27 9.3
>10_08_0877 +
21230447-21230815,21231855-21232208,21232417-21232504,
21232844-21233268,21233477-21233632,21233849-21234016,
21234170-21234310,21234393-21234629,21234710-21234823,
21235096-21235272
Length = 742
Score = 74.9 bits (176), Expect = 3e-14
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Frame = +3
Query: 3 KLWVDNHGDXDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGH 182
+++ +HG +I G+ Y L + + ++ R+V G+V D NG L G
Sbjct: 532 RVYCHHHGTMNISGNRQ----YSCKLTFKEQSFLDRNP-RQVQGLVTDANGTKVAFLMGK 586
Query: 183 WDSRVEVA---PVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNEPEPG 353
WD + + ++ N+ TG + W++ PP + YN + A LNE PG
Sbjct: 587 WDESMSCIIGDDASKVNSRNANQSTGATLL-WEK-NVPPANPTRYNLSSFAITLNELTPG 644
Query: 354 VA----PTDSRLRPDQRLMXEGCWDEANTEKLRLE 446
+ PTDSRLRPDQR + G +++AN+EKLRLE
Sbjct: 645 LKEKLPPTDSRLRPDQRHLENGEYEKANSEKLRLE 679
>08_01_0359 +
3152483-3152857,3154493-3154855,3155133-3155211,
3155473-3155879,3156342-3156497,3156728-3156895,
3156991-3157131,3157739-3157966,3158063-3158176,
3158293-3158448
Length = 728
Score = 70.1 bits (164), Expect = 8e-13
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 4/152 (2%)
Frame = +3
Query: 3 KLWVDNHGDXDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGH 182
KL+ +HG I G+ Y LK+ ++ V G V+D +G L G
Sbjct: 528 KLYCSHHGTMHIKGNRQ----YSCKLKFKEPSLLDRNPHL-VQGFVEDDDGNKPSFLIGK 582
Query: 183 WDSRVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNEPEPGVA- 359
WD + + + TS SV + V W++ P+ + YN + A LNE P +
Sbjct: 583 WDENMYYSNL-DTSKVKSVDQLKGAVLLWEKNKPSPNPTR-YNLSSFAITLNELSPDLQD 640
Query: 360 ---PTDSRLRPDQRLMXEGCWDEANTEKLRLE 446
PTDSRLRPDQR + G +++AN EKLRLE
Sbjct: 641 KLPPTDSRLRPDQRHLENGEYEKANAEKLRLE 672
>03_05_0843 + 28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 67.3 bits (157), Expect = 5e-12
Identities = 43/113 (38%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Frame = +3
Query: 123 KVTGVVKDPNGVPRYVLQGHWDSRVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDK 302
+V GVV+D +G L G WD + + W+R + PP
Sbjct: 679 EVQGVVQDRSGRTVATLFGKWDESMHYVMGDCFGKGKGSENFSEAHLLWKR-SKPPKFPT 737
Query: 303 WYNFTVLAAQLNEPEPGVA----PTDSRLRPDQRLMXEGCWDEANTEKLRLEE 449
YNFT A LNE G+ PTDSRLRPDQR + G ++ AN EKLRLE+
Sbjct: 738 RYNFTRFAITLNELTAGLKEKLPPTDSRLRPDQRCLENGEYERANAEKLRLEQ 790
>12_01_1055 -
10861665-10861829,10862827-10863171,10864374-10864682,
10864813-10864968,10865669-10866117,10869275-10869359,
10869944-10870300,10870672-10871076
Length = 756
Score = 57.6 bits (133), Expect = 4e-09
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Frame = +3
Query: 3 KLWVDNHGDXDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPN-GVPRYVLQG 179
K++ D++G I G Y LK+ ++ + V G V+D G +L G
Sbjct: 552 KIYCDHYGTMRIKGSGD----YSCKLKFKEQSIIDRNPHQ-VHGFVQDNRTGQKVAMLIG 606
Query: 180 HWDSRVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNEPEPGVA 359
WD + ++ + V W+R + + YN + A LNE +A
Sbjct: 607 KWDEAMYYVLGDPSAKPKGYDPMSEAVLLWERDKSLNQTR--YNLSPFAISLNELTANLA 664
Query: 360 ----PTDSRLRPDQRLMXEGCWDEANTEKLRLEE 449
PTDSRLRPDQR + G ++ AN EKLRLE+
Sbjct: 665 KKLPPTDSRLRPDQRHLENGEYEMANAEKLRLEQ 698
>03_02_0528 +
9189215-9189330,9190111-9190204,9190654-9190743,
9191601-9191717,9192187-9192259,9192335-9192453,
9192569-9192690,9192777-9192953,9193189-9193333,
9193458-9193636,9193742-9193991
Length = 493
Score = 53.2 bits (122), Expect = 9e-08
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +3
Query: 3 KLWVDNHGDXDIVGDAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGH 182
+ WVD+ G+ + TG L + P G+F + +V G V P+ ++ G
Sbjct: 272 RTWVDSPGEMVLTN---LTTGDKVVLLFQPCGWFGAG-RYEVDGYVYSAAEEPKIMITGK 327
Query: 183 WDSRVEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDKWYNFTVLAAQLNEPEPG--- 353
W+ + P + + W RVA P +DK Y +T A ++N +
Sbjct: 328 WNQSMSCQPCDQ---EGDPLPGTELKEIW-RVAPTPPNDK-YQYTHFAHKINSFDTAPKK 382
Query: 354 VAPTDSRLRPDQRLMXEGCWDEANTEKLRLEE 449
+ +DSRLRPD+ + +G ++ +EK RLEE
Sbjct: 383 LLASDSRLRPDRYALEKGDMSKSGSEKSRLEE 414
>11_04_0183 +
14642037-14642069,14642099-14642220,14642791-14642974,
14643148-14643348
Length = 179
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +2
Query: 98 VLQQRHATKSDGRCQGSQRRAEVRATRSLGQPRGGGPR 211
+L +R A DGR GS R R+ G GGGPR
Sbjct: 48 ILCKRFAAGGDGRRGGSGGRPSARSGGRGGSGSGGGPR 85
>11_01_0558 -
4396750-4396986,4397699-4398050,4398266-4398504,
4398608-4398709
Length = 309
Score = 28.7 bits (61), Expect = 2.3
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 156 VPRYVLQGHW-DSR-VEVAPVTSTSADNSVCKTGKFVTAWQRVAAPPDSDK 302
+P G W D + VE A V +T V G+F +AW R+ A D ++
Sbjct: 203 IPNRGGDGRWIDVQPVENAIVVNTGDQIEVLSNGRFKSAWHRILATRDGNR 253
>09_02_0612 + 11239675-11240140,11240587-11240687
Length = 188
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 240 CKTGKFVTAWQRVAAPPDSDKWY--NFTVLAAQLNEPEPGVAPTDSR 374
C G V AW +APP W + +++ A +++P P V + SR
Sbjct: 67 CVDGAGVAAWAPQSAPPARSSWSRGSASMVRAWVSQPAPPVRSSWSR 113
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 86 PALRVLQQRHATKSDGRCQGSQRRAEVRATRSLGQPRG 199
P+ Q RHA DGR +G + +A + A R L +G
Sbjct: 494 PSAPPAQDRHAQSYDGRGRGGEVQASLLAPRKLDLGKG 531
>11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834
Length = 273
Score = 27.9 bits (59), Expect = 4.0
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -3
Query: 422 GLVPAALXHEALVGA--QPRVGGRDAGLGLVELRGEHGEVVPLVGVGRGGHALPRRHELA 249
GL A + H A + VGG D RG HG VV V + GGH R HE+
Sbjct: 99 GLEEAMMAHRAAASVLEEDAVGGGD--------RGPHGNVVVSVELRAGGH--QRWHEVE 148
Query: 248 G 246
G
Sbjct: 149 G 149
>04_04_1303 - 32487174-32487871,32488583-32489123
Length = 412
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 370 ESVGATPGSGSLSCAASTVKLYHLSESGGAATRCHAVTNLPVLQTELSADV 218
+S+ ++ G+ + A KL HL ++G A C A + ++ E ADV
Sbjct: 30 DSLRSSLGATLATFAPLAGKLVHLEDTGDVAIACSASDAVRFVEAECDADV 80
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 389 LVGAQPRVGGRDAGLG--LVELRGEHGEVVPLVGVGRGGHAL 270
+V AQ + GR+ G+ + ++R EH V+P + + GH +
Sbjct: 246 IVFAQLHINGRNEGVHAFVAQIRDEHENVMPNIQIADCGHKI 287
>03_03_0115 +
14568904-14569152,14569561-14569797,14569913-14570130,
14570586-14570749,14571510-14571733
Length = 363
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -3
Query: 446 LEAQLLRVGLVPAALXHEALVGAQPRVGGRDAGLGLVELRGEH 318
L++++L LVP L +G+ G L L +LRGEH
Sbjct: 312 LDSRVLSARLVPPRLTKSEALGSSAIYRGLVPTLELTQLRGEH 354
>02_05_0040 + 25341418-25341810
Length = 130
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +2
Query: 95 RVLQQRHATKSDGRCQGSQRRAEVRATRSLG-QPRGGGPRHEH 220
R +R S RC G QRR R G Q R G PR H
Sbjct: 75 RAAPRRRCGGSKRRCSGPQRRRGAPRRRCSGPQLRCGAPRWRH 117
>02_01_0490 + 3541056-3542276
Length = 406
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 367 SVGATPGSGSLSCAASTVKLYHLSESGGAATRCHA--VTNLPVLQTELSADVLVTGATS 197
+ ATP S S AA ++KL L +GG A+ A ++ P+L+ ++ ++ A+S
Sbjct: 155 ATAATPSRSSNSSAARSLKLLLLQRNGGRASGAAASDLSVAPLLRDSSDSEASLSLASS 213
>11_06_0377 - 22900042-22900452,22900527-22902236
Length = 706
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 365 GGRDAGLGLVELRGEHGEVVPLVGVGRGGHA 273
G + G GL HGE +PL G+G GG A
Sbjct: 475 GDAEDGEGLPFRLRAHGEGLPLPGLGVGGRA 505
>08_02_0085 +
12108474-12108552,12108656-12108759,12109726-12109925,
12110003-12110103,12110184-12110379,12110584-12110745,
12110856-12110937,12111741-12112004,12113047-12113174,
12113795-12113957
Length = 492
Score = 27.1 bits (57), Expect = 7.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 396 MXEGCWDEANTEKLRL 443
+ +GC+D+ NTEKLR+
Sbjct: 435 LFKGCFDDINTEKLRI 450
>04_04_0044 - 22333376-22333898,22335509-22336227
Length = 413
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 95 RVLQQRHATKSDGRCQGSQRRAEVRATRSLGQPRGGGPRH 214
R+ ++ + DG C GS +E ATR+ G GG +H
Sbjct: 64 RLEEEEAGLELDGSCWGSW--SEAAATRASGTATGGAGKH 101
>03_03_0200 -
15396187-15396246,15396345-15396566,15396645-15397102,
15397183-15397645
Length = 400
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 318 VLAAQLNEPEPGVAPTDSRLRPDQRLMXEGC 410
VL +L E +P +PT + L R + EGC
Sbjct: 152 VLTEELGEGDPSRSPTRANLLAAMRWLVEGC 182
>03_01_0220 +
1745719-1745806,1745893-1746062,1746170-1746359,
1748486-1748877,1749218-1749523
Length = 381
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 45 DAGPATGYVAHLKYLPYGYFSKDTQRKVTGVVKDPNGVPRYVLQGHWDSRVEVAPVTSTS 224
D ATGY ++ G F K + K+ G + + R +QG + VEV +T +
Sbjct: 56 DLSVATGYFNEANFIGEGGFGKVYKGKINGQMVAVKQLTRDGVQGRNEFLVEVLMLTVLN 115
Query: 225 ADNSVCKTG 251
+ V G
Sbjct: 116 HPHLVSLVG 124
>02_01_0504 - 3673312-3673617
Length = 101
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 326 GEHGEVVPLVGVGRGGHALP 267
GEHG VGVGR G A+P
Sbjct: 27 GEHGVGAAGVGVGRSGSAVP 46
>04_03_0147 -
11853940-11854128,11854933-11855013,11855501-11855584,
11855663-11855735,11855888-11855949,11856246-11856327,
11857643-11858262
Length = 396
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 102 FSKDTQRKVTGVVKD-PNGVPRYVLQGHWDSRVEVAPVTSTSADNSVCKTGKFVTA 266
F ++T + V D P G Y+ +GH+ + P +S N C+ VTA
Sbjct: 339 FLEETLDAIPNSVLDAPIGKEAYIEEGHFADMDSLLPPRYSSLTNGSCEIPALVTA 394
>03_06_0358 +
33366265-33366447,33367371-33367468,33367910-33368945,
33369042-33369554,33370456-33370644,33370715-33370848,
33371196-33371358
Length = 771
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 125 SDGRCQGSQRRAEVRATRSLGQPRGGGPR 211
++ CQ S R E+RA+ S + G GPR
Sbjct: 220 AEAACQSSTRGVELRASASALKRLGDGPR 248
>01_01_0610 +
4533141-4533310,4534889-4535075,4535232-4535323,
4536203-4536308,4536441-4536649,4537049-4537091,
4537413-4537645,4537762-4538233
Length = 503
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 358 ATPGSGSLSCAASTVKLYHLS-ESGGAATRCH 266
A P SGS SC ST HLS S A +CH
Sbjct: 277 APPSSGSSSCVGST----HLSTNSAPIAVKCH 304
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,311,142
Number of Sequences: 37544
Number of extensions: 219925
Number of successful extensions: 927
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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